Wall clock time and date at job start Tue Mar 31 2020 11:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13599 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46493 * 109.47213 * 187.72198 * 3 2 1 5 5 C 1.36915 * 120.00127 * 97.11419 * 4 3 2 6 6 H 1.07992 * 120.00696 * 158.92707 * 5 4 3 7 7 C 1.39027 * 119.99497 * 338.93186 * 5 4 3 8 8 N 1.31381 * 120.00241 * 349.34253 * 7 5 4 9 9 Si 1.86797 * 119.99915 * 169.34930 * 7 5 4 10 10 H 1.48497 * 109.47557 * 59.99440 * 9 7 5 11 11 H 1.48493 * 109.47357 * 179.97438 * 9 7 5 12 12 H 1.48509 * 109.47006 * 299.99505 * 9 7 5 13 13 C 1.34773 * 120.00320 * 277.11381 * 4 3 2 14 14 O 1.21607 * 120.00277 * 183.74869 * 13 4 3 15 15 C 1.47609 * 120.00189 * 3.74749 * 13 4 3 16 16 C 1.41538 * 126.52751 * 185.25025 * 15 13 4 17 17 C 1.35347 * 105.50290 * 179.97438 * 16 15 13 18 18 N 1.35046 * 107.24206 * 0.25909 * 17 16 15 19 19 C 1.46505 * 124.87787 * 179.70095 * 18 17 16 20 20 C 1.52997 * 109.46867 * 125.00315 * 19 18 17 21 21 C 1.52997 * 109.47113 * 179.97438 * 20 19 18 22 22 F 1.39897 * 109.47191 * 59.99971 * 21 20 19 23 23 F 1.39899 * 109.47492 * 179.97438 * 21 20 19 24 24 F 1.39902 * 109.47442 * 300.00216 * 21 20 19 25 25 N 1.28464 * 110.24136 * 359.55370 * 18 17 16 26 26 H 1.09010 * 109.47153 * 67.72565 * 3 2 1 27 27 H 1.09000 * 109.47414 * 307.72664 * 3 2 1 28 28 H 0.96997 * 119.99893 * 180.02562 * 8 7 5 29 29 H 1.08001 * 127.24684 * 359.94146 * 16 15 13 30 30 H 1.08009 * 126.37680 * 180.02562 * 17 16 15 31 31 H 1.09003 * 109.47098 * 245.00035 * 19 18 17 32 32 H 1.08992 * 109.47128 * 5.00235 * 19 18 17 33 33 H 1.08994 * 109.47529 * 300.00034 * 20 19 18 34 34 H 1.09002 * 109.47306 * 59.99935 * 20 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 7 3.0957 1.3695 0.1856 5 6 3.4622 1.8026 1.4316 6 1 4.1220 2.6512 1.5361 7 6 2.9849 1.1500 2.5626 8 7 2.0259 0.2589 2.4512 9 14 3.7070 1.5401 4.2406 10 1 3.5040 2.9794 4.5445 11 1 3.0305 0.7162 5.2743 12 1 5.1605 1.2351 4.2370 13 6 3.1837 2.2025 -0.8702 14 8 3.6522 3.3158 -0.7290 15 6 2.7114 1.7636 -2.1981 16 6 2.8314 2.4787 -3.4136 17 6 2.2614 1.6906 -4.3548 18 7 1.8236 0.5754 -3.7314 19 6 1.1375 -0.5384 -4.3909 20 6 1.8827 -1.8420 -4.0973 21 6 1.1658 -3.0053 -4.7855 22 9 1.1385 -2.7847 -6.1667 23 9 1.8475 -4.1973 -4.5176 24 9 -0.1438 -3.0977 -4.3021 25 7 2.0980 0.6303 -2.4776 26 1 2.9715 -0.3887 -0.9511 27 1 2.9717 -0.6280 0.8128 28 1 1.6927 -0.1962 3.2403 29 1 3.2822 3.4493 -3.5593 30 1 2.1700 1.9138 -5.4076 31 1 0.1170 -0.6106 -4.0146 32 1 1.1166 -0.3663 -5.4670 33 1 2.9031 -1.7699 -4.4736 34 1 1.9036 -2.0142 -3.0212 RHF calculation, no. of doubly occupied orbitals= 57 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001519164411.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:30:44 Heat of formation + Delta-G solvation = -58.611622 kcal Electronic energy + Delta-G solvation = -26488.352980 eV Core-core repulsion = 22009.547059 eV Total energy + Delta-G solvation = -4478.805921 eV No. of doubly occupied orbitals = 57 Molecular weight (most abundant/longest-lived isotopes) = 316.089 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -50.41827 -47.91858 -47.87773 -42.33262 -38.50646 -35.67313 -35.11100 -34.18862 -31.97645 -30.86029 -30.35910 -27.39025 -26.55155 -24.95421 -23.13646 -21.83253 -21.06895 -19.25825 -18.86028 -18.77522 -17.88004 -17.76867 -16.95323 -16.25456 -16.16184 -15.72306 -15.03024 -14.80154 -14.68315 -14.33771 -14.25458 -14.11789 -14.02744 -14.00152 -13.47623 -13.34052 -13.12037 -12.82178 -12.73472 -12.61170 -12.15774 -11.91838 -11.80648 -11.45558 -11.21178 -11.11992 -10.58906 -10.45416 -10.41606 -10.06948 -9.24650 -8.91299 -8.81942 -8.71612 -8.01894 -6.48885 -4.04119 2.01294 2.20602 2.55078 2.70771 3.18542 3.21724 3.24096 3.53333 3.58215 3.71474 3.81067 4.10185 4.19403 4.25980 4.36246 4.42453 4.71008 4.77293 4.97843 4.98788 5.03847 5.27398 5.39171 5.54200 5.74389 6.02851 6.12840 6.34995 6.71375 6.79302 6.98647 7.43156 7.91176 8.19271 8.35897 8.97086 8.99398 9.17406 9.74275 10.54416 Molecular weight = 316.09amu Principal moments of inertia in cm(-1) A = 0.017037 B = 0.004151 C = 0.003578 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1643.073069 B = 6743.864713 C = 7823.311532 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.491 5.491 2 C 0.271 3.729 3 C 0.224 3.776 4 N -0.423 5.423 5 C -0.306 4.306 6 H 0.110 0.890 7 C 0.031 3.969 8 N -0.879 5.879 9 Si 0.937 3.063 10 H -0.272 1.272 11 H -0.284 1.284 12 H -0.270 1.270 13 C 0.526 3.474 14 O -0.569 6.569 15 C 0.021 3.979 16 C -0.184 4.184 17 C -0.023 4.023 18 N -0.299 5.299 19 C 0.128 3.872 20 C -0.184 4.184 21 C 0.460 3.540 22 F -0.185 7.185 23 F -0.179 7.179 24 F -0.179 7.179 25 N -0.273 5.273 26 H 0.090 0.910 27 H 0.129 0.871 28 H 0.275 0.725 29 H 0.159 0.841 30 H 0.176 0.824 31 H 0.102 0.898 32 H 0.111 0.889 33 H 0.119 0.881 34 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.175 -7.500 -15.588 17.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.172 5.172 2 C -0.046 4.046 3 C 0.097 3.903 4 N -0.142 5.142 5 C -0.434 4.434 6 H 0.128 0.872 7 C -0.173 4.173 8 N -0.518 5.518 9 Si 0.763 3.237 10 H -0.197 1.197 11 H -0.209 1.209 12 H -0.196 1.196 13 C 0.313 3.687 14 O -0.451 6.451 15 C -0.140 4.140 16 C -0.212 4.212 17 C -0.165 4.165 18 N -0.086 5.086 19 C 0.006 3.994 20 C -0.223 4.223 21 C 0.406 3.594 22 F -0.166 7.166 23 F -0.160 7.160 24 F -0.160 7.160 25 N -0.107 5.107 26 H 0.108 0.892 27 H 0.146 0.854 28 H 0.086 0.914 29 H 0.176 0.824 30 H 0.193 0.807 31 H 0.120 0.880 32 H 0.129 0.871 33 H 0.138 0.862 34 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -0.838 -8.176 -14.959 17.068 hybrid contribution 0.633 0.560 0.351 0.915 sum -0.205 -7.616 -14.608 16.476 Atomic orbital electron populations 1.80830 1.13722 1.08710 1.13938 1.28958 0.95027 0.92188 0.88476 1.18936 0.82034 0.86753 1.02612 1.43457 1.54529 1.08978 1.07234 1.19775 1.27158 1.16155 0.80291 0.87220 1.25411 0.95052 0.96445 1.00351 1.69786 1.24310 1.26367 1.31358 0.85819 0.78976 0.78775 0.80153 1.19686 1.20885 1.19554 1.16811 0.84957 0.84963 0.81983 1.90640 1.50050 1.20317 1.84064 1.22540 1.02777 0.92068 0.96615 1.21749 1.06456 1.02156 0.90868 1.22743 1.04567 0.89202 0.99968 1.45264 1.42985 1.15082 1.05304 1.21670 0.96657 0.82652 0.98435 1.23185 1.01916 0.91362 1.05862 1.20281 0.77785 0.84369 0.77007 1.93191 1.96451 1.94656 1.32311 1.93217 1.79622 1.49542 1.93614 1.93234 1.38471 1.96573 1.87734 1.73846 1.17912 1.22383 0.96599 0.89207 0.85370 0.91378 0.82373 0.80682 0.87958 0.87051 0.86222 0.85182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.49 -12.18 18.54 42.15 0.78 -11.40 16 2 C 0.27 6.33 11.99 -20.76 -0.25 6.08 16 3 C 0.22 4.80 4.75 -6.83 -0.03 4.77 16 4 N -0.42 -10.36 2.60 -119.09 -0.31 -10.67 16 5 C -0.31 -7.95 9.34 -14.99 -0.14 -8.09 16 6 H 0.11 2.94 7.35 -52.49 -0.39 2.55 16 7 C 0.03 0.77 5.11 -17.45 -0.09 0.68 16 8 N -0.88 -22.24 9.08 55.50 0.50 -21.73 16 9 Si 0.94 19.66 29.57 -169.99 -5.03 14.63 16 10 H -0.27 -5.83 7.11 56.52 0.40 -5.43 16 11 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 12 H -0.27 -5.50 7.11 56.52 0.40 -5.10 16 13 C 0.53 12.74 7.56 -12.44 -0.09 12.65 16 14 O -0.57 -15.32 16.60 5.27 0.09 -15.23 16 15 C 0.02 0.42 6.70 -82.77 -0.55 -0.13 16 16 C -0.18 -2.98 10.81 -39.36 -0.43 -3.40 16 17 C -0.02 -0.28 11.40 -17.17 -0.20 -0.48 16 18 N -0.30 -3.97 3.41 -61.33 -0.21 -4.18 16 19 C 0.13 1.17 6.15 -4.04 -0.02 1.15 16 20 C -0.18 -1.57 5.36 -26.73 -0.14 -1.71 16 21 C 0.46 4.08 3.16 37.16 0.12 4.20 16 22 F -0.18 -1.57 16.80 2.25 0.04 -1.53 16 23 F -0.18 -1.77 17.32 2.25 0.04 -1.73 16 24 F -0.18 -1.88 16.80 2.25 0.04 -1.84 16 25 N -0.27 -4.76 7.18 33.41 0.24 -4.52 16 26 H 0.09 1.66 5.94 -51.92 -0.31 1.35 16 27 H 0.13 2.79 6.27 -51.93 -0.33 2.47 16 28 H 0.28 6.75 8.31 -40.82 -0.34 6.41 16 29 H 0.16 2.39 8.06 -52.49 -0.42 1.97 16 30 H 0.18 1.34 8.06 -52.48 -0.42 0.92 16 31 H 0.10 1.01 7.80 -51.93 -0.41 0.61 16 32 H 0.11 0.65 7.70 -51.93 -0.40 0.25 16 33 H 0.12 0.84 8.14 -51.93 -0.42 0.42 16 34 H 0.13 1.28 8.08 -51.93 -0.42 0.86 16 LS Contribution 317.23 15.07 4.78 4.78 Total: -1.00 -32.42 317.23 -3.52 -35.94 By element: Atomic # 1 Polarization: 4.42 SS G_CDS: -2.65 Total: 1.77 kcal Atomic # 6 Polarization: 17.55 SS G_CDS: -1.83 Total: 15.72 kcal Atomic # 7 Polarization: -53.51 SS G_CDS: 1.01 Total: -52.51 kcal Atomic # 8 Polarization: -15.32 SS G_CDS: 0.09 Total: -15.23 kcal Atomic # 9 Polarization: -5.22 SS G_CDS: 0.11 Total: -5.10 kcal Atomic # 14 Polarization: 19.66 SS G_CDS: -5.03 Total: 14.63 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -32.42 -3.52 -35.94 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001519164411.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.673 kcal (2) G-P(sol) polarization free energy of solvation -32.424 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.096 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.515 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.612 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds