Wall clock time and date at job start Tue Mar 31 2020 11:19:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52998 * 109.47428 * 2 1 4 4 O 1.42893 * 109.47543 * 179.97438 * 3 2 1 5 5 C 1.35836 * 117.00358 * 179.97438 * 4 3 2 6 6 C 1.38949 * 119.90851 * 359.97438 * 5 4 3 7 7 C 1.37764 * 120.10399 * 179.97438 * 6 5 4 8 8 C 1.39752 * 119.92601 * 0.02562 * 7 6 5 9 9 C 1.47772 * 120.08575 * 179.97438 * 8 7 6 10 10 C 1.39240 * 120.34051 * 309.99780 * 9 8 7 11 11 C 1.38024 * 119.97826 * 180.02562 * 10 9 8 12 12 C 1.38956 * 120.68692 * 0.02634 * 11 10 9 13 13 C 1.36414 * 120.69890 * 359.97438 * 12 11 10 14 14 C 1.40758 * 119.98710 * 359.72197 * 13 12 11 15 15 C 1.40847 * 120.33506 * 180.28188 * 14 13 12 16 16 H 1.08004 * 120.00059 * 153.73217 * 15 14 13 17 17 C 1.40038 * 119.99937 * 333.72369 * 15 14 13 18 18 N 1.30787 * 120.00057 * 342.96818 * 17 15 14 19 19 Si 1.86807 * 120.00106 * 162.96885 * 17 15 14 20 20 H 1.48504 * 109.46706 * 0.02562 * 19 17 15 21 21 H 1.48500 * 109.47121 * 119.99941 * 19 17 15 22 22 H 1.48497 * 109.46887 * 240.00301 * 19 17 15 23 23 C 1.39720 * 119.82943 * 0.02562 * 8 7 6 24 24 C 1.37877 * 119.89229 * 359.97438 * 23 8 7 25 25 Cl 1.73594 * 119.96588 * 179.97438 * 24 23 8 26 26 H 1.08999 * 109.47008 * 60.00219 * 1 2 3 27 27 H 1.08996 * 109.47623 * 180.02562 * 1 2 3 28 28 H 1.09005 * 109.47260 * 300.00214 * 1 2 3 29 29 H 1.08996 * 109.47392 * 239.99670 * 2 1 3 30 30 H 1.08999 * 109.47008 * 119.99781 * 2 1 3 31 31 H 1.09005 * 109.47075 * 59.99672 * 3 2 1 32 32 H 1.09006 * 109.47210 * 299.99957 * 3 2 1 33 33 H 1.07994 * 119.94596 * 0.02562 * 6 5 4 34 34 H 1.07996 * 120.03230 * 180.30118 * 7 6 5 35 35 H 1.08001 * 120.00972 * 0.02699 * 10 9 8 36 36 H 1.08001 * 119.65886 * 180.02562 * 11 10 9 37 37 H 1.08001 * 119.65486 * 179.97438 * 12 11 10 38 38 H 1.08001 * 120.00508 * 179.97438 * 13 12 11 39 39 H 0.97002 * 120.00217 * 179.97438 * 18 17 15 40 40 H 1.07997 * 120.05557 * 180.02562 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 8 3.4690 1.4425 0.0006 5 6 4.0857 2.6528 0.0001 6 6 3.3271 3.8169 -0.0014 7 6 3.9484 5.0465 -0.0014 8 6 5.3439 5.1225 -0.0003 9 6 6.0140 6.4396 -0.0008 10 6 5.6453 7.4160 -0.9224 11 6 6.2765 8.6434 -0.9166 12 6 7.2818 8.9195 0.0022 13 6 7.6650 7.9833 0.9174 14 6 7.0363 6.7242 0.9415 15 6 7.4221 5.7543 1.8871 16 1 6.7191 4.9972 2.2018 17 6 8.7173 5.7716 2.4192 18 7 9.6613 6.4505 1.8204 19 14 9.0969 4.8250 3.9844 20 1 7.8664 4.1442 4.4617 21 1 10.1470 3.8121 3.7079 22 1 9.5788 5.7659 5.0272 23 6 6.1038 3.9501 0.0002 24 6 5.4744 2.7233 0.0001 25 17 6.4167 1.2654 0.0001 26 1 -0.3633 0.5138 -0.8900 27 1 -0.3634 -1.0276 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 1.8933 -0.5139 -0.8899 30 1 1.8933 -0.5138 0.8900 31 1 1.6767 1.9563 0.8900 32 1 1.6767 1.9563 -0.8900 33 1 2.2488 3.7577 -0.0018 34 1 3.3577 5.9506 0.0024 35 1 4.8656 7.2130 -1.6417 36 1 5.9861 9.3971 -1.6335 37 1 7.7648 9.8854 -0.0084 38 1 8.4479 8.2097 1.6261 39 1 10.5584 6.4627 2.1892 40 1 7.1824 4.0046 0.0015 RHF calculation, no. of doubly occupied orbitals= 55 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001204785266.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:19:12 Heat of formation + Delta-G solvation = -20.762727 kcal Electronic energy + Delta-G solvation = -23135.277525 eV Core-core repulsion = 19711.926352 eV Total energy + Delta-G solvation = -3423.351173 eV No. of doubly occupied orbitals = 55 Molecular weight (most abundant/longest-lived isotopes) = 316.097 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -39.84184 -38.13082 -36.75011 -35.79501 -34.00979 -33.77989 -31.15194 -30.43325 -29.54227 -27.87604 -26.47757 -25.24270 -22.78508 -22.29242 -21.26312 -20.66224 -19.77097 -17.97099 -17.31870 -16.27212 -16.04678 -15.68274 -15.21309 -14.44708 -14.25983 -14.09637 -13.90845 -13.62059 -13.32382 -13.04389 -12.69363 -12.58608 -12.41992 -12.27013 -11.74513 -11.53742 -11.51007 -11.35315 -11.20452 -11.14501 -10.91138 -10.76991 -10.64974 -10.48615 -10.46812 -10.35607 -9.65768 -9.49506 -9.26912 -8.34856 -7.96555 -7.48283 -7.13722 -6.83010 -4.43486 1.67929 1.77337 2.65153 2.73409 2.96433 3.05362 3.11550 3.18294 3.31059 3.88280 4.22180 4.55145 4.72490 4.73263 5.04668 5.15307 5.20722 5.24768 5.40322 5.50065 5.58385 5.71205 5.73071 5.87613 5.88149 5.98756 6.06959 6.15839 6.34449 6.35984 6.48553 6.62803 6.80034 6.94871 7.07884 7.16144 7.22018 7.34848 7.49622 7.62540 7.82693 7.96257 8.02368 8.17877 8.52548 8.76935 8.86001 10.06048 Molecular weight = 316.10amu Principal moments of inertia in cm(-1) A = 0.013126 B = 0.004338 C = 0.003572 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2132.715754 B = 6452.991859 C = 7835.864279 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.149 4.149 2 C -0.123 4.123 3 C 0.060 3.940 4 O -0.310 6.310 5 C 0.108 3.892 6 C -0.200 4.200 7 C -0.090 4.090 8 C 0.001 3.999 9 C -0.189 4.189 10 C -0.069 4.069 11 C -0.244 4.244 12 C -0.100 4.100 13 C -0.158 4.158 14 C 0.131 3.869 15 C -0.451 4.451 16 H 0.084 0.916 17 C 0.079 3.921 18 N -0.785 5.785 19 Si 0.901 3.099 20 H -0.257 1.257 21 H -0.272 1.272 22 H -0.271 1.271 23 C -0.053 4.053 24 C -0.065 4.065 25 Cl -0.077 7.077 26 H 0.057 0.943 27 H 0.062 0.938 28 H 0.057 0.943 29 H 0.072 0.928 30 H 0.072 0.928 31 H 0.059 0.941 32 H 0.059 0.941 33 H 0.125 0.875 34 H 0.124 0.876 35 H 0.090 0.910 36 H 0.088 0.912 37 H 0.087 0.913 38 H 0.117 0.883 39 H 0.282 0.718 40 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.063 -7.750 -1.924 13.644 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.161 4.161 3 C -0.016 4.016 4 O -0.224 6.224 5 C 0.063 3.937 6 C -0.219 4.219 7 C -0.108 4.108 8 C 0.001 3.999 9 C -0.190 4.190 10 C -0.088 4.088 11 C -0.263 4.263 12 C -0.119 4.119 13 C -0.177 4.177 14 C 0.129 3.871 15 C -0.480 4.480 16 H 0.102 0.898 17 C -0.140 4.140 18 N -0.409 5.409 19 Si 0.725 3.275 20 H -0.181 1.181 21 H -0.197 1.197 22 H -0.196 1.196 23 C -0.071 4.071 24 C -0.092 4.092 25 Cl -0.048 7.048 26 H 0.076 0.924 27 H 0.081 0.919 28 H 0.076 0.924 29 H 0.091 0.909 30 H 0.091 0.909 31 H 0.078 0.922 32 H 0.077 0.923 33 H 0.143 0.857 34 H 0.142 0.858 35 H 0.108 0.892 36 H 0.106 0.894 37 H 0.105 0.895 38 H 0.135 0.865 39 H 0.093 0.907 40 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -10.636 -8.035 -1.906 13.466 hybrid contribution 0.233 -0.266 0.689 0.775 sum -10.404 -8.302 -1.216 13.366 Atomic orbital electron populations 1.21686 0.94495 1.02285 1.02158 1.21463 0.95751 0.95178 1.03664 1.22795 0.79199 0.98366 1.01235 1.86054 1.20530 1.26697 1.89113 1.18568 0.90240 0.84532 1.00404 1.20933 0.99191 0.91803 1.09924 1.21186 0.94283 0.96529 0.98820 1.18667 0.91489 0.92918 0.96876 1.18457 1.06250 0.92313 1.01996 1.20550 0.97953 0.93222 0.97030 1.20263 1.03819 0.97636 1.04612 1.20487 0.97022 0.97878 0.96501 1.21035 1.02767 0.93085 1.00836 1.17531 0.88465 0.91854 0.89278 1.19613 0.96929 1.11885 1.19540 0.89841 1.25924 0.95986 0.94682 0.97434 1.69804 1.02415 1.33107 1.35585 0.86352 0.79691 0.79929 0.81569 1.18083 1.19693 1.19596 1.21274 1.01478 0.88559 0.95832 1.20085 0.88184 0.88238 1.12681 1.98317 1.72450 1.36702 1.97321 0.92429 0.91922 0.92407 0.90916 0.90887 0.92246 0.92284 0.85672 0.85821 0.89212 0.89414 0.89473 0.86467 0.90661 0.83543 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.05 9.91 37.16 0.37 -0.68 16 2 C -0.12 -1.14 6.30 -26.73 -0.17 -1.31 16 3 C 0.06 0.68 4.74 37.16 0.18 0.85 16 4 O -0.31 -4.82 9.58 -19.22 -0.18 -5.00 16 5 C 0.11 1.87 6.69 -39.02 -0.26 1.61 16 6 C -0.20 -3.19 9.02 -39.49 -0.36 -3.55 16 7 C -0.09 -1.60 9.51 -39.19 -0.37 -1.98 16 8 C 0.00 0.02 4.92 -104.88 -0.52 -0.49 16 9 C -0.19 -4.35 5.52 -104.22 -0.58 -4.92 16 10 C -0.07 -1.50 9.51 -39.29 -0.37 -1.87 16 11 C -0.24 -5.27 10.03 -39.39 -0.40 -5.66 16 12 C -0.10 -2.27 9.96 -39.97 -0.40 -2.67 16 13 C -0.16 -3.93 8.62 -39.29 -0.34 -4.26 16 14 C 0.13 3.30 5.55 -106.55 -0.59 2.71 16 15 C -0.45 -11.27 7.13 -37.92 -0.27 -11.54 16 16 H 0.08 2.09 6.65 -52.48 -0.35 1.74 16 17 C 0.08 1.90 5.14 -17.32 -0.09 1.81 16 18 N -0.78 -19.33 11.03 55.55 0.61 -18.72 16 19 Si 0.90 18.38 29.59 -169.99 -5.03 13.35 16 20 H -0.26 -5.31 7.11 56.52 0.40 -4.91 16 21 H -0.27 -5.49 7.11 56.52 0.40 -5.09 16 22 H -0.27 -5.41 7.11 56.52 0.40 -5.01 16 23 C -0.05 -1.09 7.78 -39.16 -0.30 -1.40 16 24 C -0.06 -1.23 6.33 -39.41 -0.25 -1.48 16 25 Cl -0.08 -1.36 28.49 -51.86 -1.48 -2.84 16 26 H 0.06 0.38 8.14 -51.93 -0.42 -0.05 16 27 H 0.06 0.38 8.14 -51.93 -0.42 -0.04 16 28 H 0.06 0.39 8.14 -51.93 -0.42 -0.04 16 29 H 0.07 0.68 8.14 -51.93 -0.42 0.26 16 30 H 0.07 0.70 8.14 -51.93 -0.42 0.27 16 31 H 0.06 0.64 7.66 -51.93 -0.40 0.24 16 32 H 0.06 0.62 7.65 -51.93 -0.40 0.22 16 33 H 0.13 1.61 6.28 -52.49 -0.33 1.28 16 34 H 0.12 2.01 8.04 -52.49 -0.42 1.59 16 35 H 0.09 1.72 8.04 -52.49 -0.42 1.30 16 36 H 0.09 1.67 8.06 -52.49 -0.42 1.25 16 37 H 0.09 1.76 8.06 -52.49 -0.42 1.34 16 38 H 0.12 2.99 6.26 -52.49 -0.33 2.66 16 39 H 0.28 6.34 8.30 -40.82 -0.34 6.00 16 40 H 0.15 3.25 7.33 -52.49 -0.38 2.87 16 LS Contribution 349.70 15.07 5.27 5.27 Total: -1.00 -26.25 349.70 -10.65 -36.90 By element: Atomic # 1 Polarization: 11.00 SS G_CDS: -5.12 Total: 5.88 kcal Atomic # 6 Polarization: -30.12 SS G_CDS: -4.72 Total: -34.84 kcal Atomic # 7 Polarization: -19.33 SS G_CDS: 0.61 Total: -18.72 kcal Atomic # 8 Polarization: -4.82 SS G_CDS: -0.18 Total: -5.00 kcal Atomic # 14 Polarization: 18.38 SS G_CDS: -5.03 Total: 13.35 kcal Atomic # 17 Polarization: -1.36 SS G_CDS: -1.48 Total: -2.84 kcal Total LS contribution 5.27 Total: 5.27 kcal Total: -26.25 -10.65 -36.90 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001204785266.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.134 kcal (2) G-P(sol) polarization free energy of solvation -26.246 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.651 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.763 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds