Wall clock time and date at job start Tue Mar 31 2020 11:44:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52996 * 109.47094 * 2 1 4 4 N 1.46500 * 109.47402 * 120.00340 * 2 1 3 5 5 C 1.46501 * 120.00340 * 122.30045 * 4 2 1 6 6 C 1.50707 * 109.46895 * 270.00156 * 5 4 2 7 7 H 1.07991 * 119.99965 * 0.02562 * 6 5 4 8 8 C 1.37872 * 119.99523 * 179.97438 * 6 5 4 9 9 N 1.31519 * 119.99888 * 179.97438 * 8 6 5 10 10 Si 1.86796 * 120.00336 * 359.97438 * 8 6 5 11 11 H 1.48496 * 109.47313 * 90.00061 * 10 8 6 12 12 H 1.48503 * 109.47499 * 210.00157 * 10 8 6 13 13 H 1.48499 * 109.47233 * 329.99717 * 10 8 6 14 14 C 1.34784 * 119.99634 * 302.30469 * 4 2 1 15 15 O 1.21553 * 119.99019 * 211.73796 * 14 4 2 16 16 C 1.47833 * 120.00055 * 31.73249 * 14 4 2 17 17 C 1.40027 * 120.55711 * 137.12774 * 16 14 4 18 18 C 1.38350 * 118.29186 * 179.70276 * 17 16 14 19 19 C 1.38358 * 119.30053 * 0.27427 * 18 17 16 20 20 C 1.50703 * 119.45839 * 179.97438 * 19 18 17 21 21 F 1.39899 * 109.46974 * 90.00143 * 20 19 18 22 22 F 1.39898 * 109.47057 * 209.99563 * 20 19 18 23 23 F 1.39893 * 109.47385 * 330.00168 * 20 19 18 24 24 N 1.31925 * 121.07896 * 0.02562 * 19 18 17 25 25 C 1.31691 * 121.88292 * 359.97438 * 24 19 18 26 26 H 1.09000 * 109.46933 * 253.14960 * 1 2 3 27 27 H 1.08999 * 109.47165 * 13.14830 * 1 2 3 28 28 H 1.08997 * 109.47026 * 133.15288 * 1 2 3 29 29 H 1.09001 * 109.46800 * 240.00423 * 2 1 3 30 30 H 1.08998 * 109.47105 * 222.81094 * 3 2 1 31 31 H 1.09000 * 109.47070 * 342.81359 * 3 2 1 32 32 H 1.08996 * 109.47086 * 102.81212 * 3 2 1 33 33 H 1.09001 * 109.46924 * 29.99898 * 5 4 2 34 34 H 1.08990 * 109.47082 * 149.99978 * 5 4 2 35 35 H 0.96995 * 119.99838 * 179.97438 * 9 8 6 36 36 H 1.08001 * 120.85339 * 359.97438 * 17 16 14 37 37 H 1.08002 * 120.35349 * 180.24912 * 18 17 16 38 38 H 1.07999 * 119.71956 * 179.97438 * 25 24 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 2.0184 -0.6907 1.1961 5 6 2.9018 -1.8517 1.0623 6 6 2.0724 -3.1075 0.9834 7 1 0.9951 -3.0468 1.0281 8 6 2.6890 -4.3338 0.8532 9 7 1.9652 -5.4298 0.7849 10 14 4.5523 -4.4386 0.7738 11 1 5.0987 -4.5879 2.1465 12 1 4.9477 -5.6115 -0.0467 13 1 5.0920 -3.1996 0.1583 14 6 1.6549 -0.2579 2.4197 15 8 2.4164 -0.3819 3.3590 16 6 0.3303 0.3674 2.6193 17 6 -0.4483 0.0443 3.7373 18 6 -1.6779 0.6620 3.8809 19 6 -2.0974 1.5664 2.9214 20 6 -3.4363 2.2409 3.0739 21 9 -3.2802 3.4295 3.7952 22 9 -3.9603 2.5285 1.8090 23 9 -4.3113 1.3912 3.7590 24 7 -1.3449 1.8470 1.8748 25 6 -0.1675 1.2853 1.6939 26 1 -0.3633 -0.2979 0.9835 27 1 -0.3633 1.0007 -0.2338 28 1 -0.3633 -0.7029 -0.7497 29 1 1.8933 -0.5138 -0.8900 30 1 2.8719 1.5337 -0.6984 31 1 1.2355 2.1123 -0.3037 32 1 2.3760 1.7090 1.0020 33 1 3.4976 -1.7522 0.1549 34 1 3.5630 -1.9067 1.9269 35 1 2.3990 -6.2924 0.6929 36 1 -0.0961 -0.6657 4.4711 37 1 -2.3039 0.4405 4.7326 38 1 0.4194 1.5404 0.8240 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000608814419.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:44:43 Heat of formation + Delta-G solvation = -62.225845 kcal Electronic energy + Delta-G solvation = -27259.119716 eV Core-core repulsion = 22883.697413 eV Total energy + Delta-G solvation = -4375.422302 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 316.114 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -50.29773 -47.84490 -47.73291 -41.69806 -38.99353 -36.83521 -33.80298 -32.87009 -32.34281 -31.21893 -28.26606 -27.46658 -26.68448 -24.14626 -23.62382 -22.15879 -21.98364 -19.20813 -18.86379 -18.67772 -18.49179 -17.09479 -17.01050 -16.53849 -15.90145 -15.50195 -15.09098 -14.83809 -14.62349 -14.49225 -14.28738 -14.20340 -13.96975 -13.92775 -13.90113 -13.59524 -13.39759 -12.84137 -12.75394 -12.63669 -12.33388 -12.16758 -11.86782 -11.62488 -11.34574 -10.98737 -10.79331 -10.59261 -10.29942 -10.10612 -10.03642 -9.68006 -9.41743 -8.83764 -8.72689 -7.88919 -6.22651 -4.24097 0.31699 1.03248 2.30834 2.72646 3.19633 3.24541 3.27958 3.30957 3.37364 3.55745 3.75582 4.24195 4.27506 4.37153 4.49026 4.65199 4.78527 4.81549 4.90254 4.99861 5.10732 5.20338 5.37509 5.46988 5.53214 5.66773 5.75400 5.87500 5.99031 6.07665 6.19766 6.30985 6.55707 6.76467 7.16430 7.39516 7.43296 7.94098 8.28335 8.47337 8.79852 9.36525 10.90012 Molecular weight = 316.11amu Principal moments of inertia in cm(-1) A = 0.021785 B = 0.003751 C = 0.003605 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1284.976457 B = 7463.174879 C = 7764.409173 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.207 4.207 2 C 0.133 3.867 3 C -0.187 4.187 4 N -0.598 5.598 5 C 0.218 3.782 6 C -0.542 4.542 7 H 0.076 0.924 8 C 0.076 3.924 9 N -0.893 5.893 10 Si 0.875 3.125 11 H -0.273 1.273 12 H -0.284 1.284 13 H -0.264 1.264 14 C 0.576 3.424 15 O -0.520 6.520 16 C -0.163 4.163 17 C -0.022 4.022 18 C -0.141 4.141 19 C 0.046 3.954 20 C 0.524 3.476 21 F -0.172 7.172 22 F -0.164 7.164 23 F -0.172 7.172 24 N -0.471 5.471 25 C 0.130 3.870 26 H 0.084 0.916 27 H 0.081 0.919 28 H 0.071 0.929 29 H 0.106 0.894 30 H 0.074 0.926 31 H 0.075 0.925 32 H 0.066 0.934 33 H 0.035 0.965 34 H 0.040 0.960 35 H 0.266 0.734 36 H 0.155 0.845 37 H 0.151 0.849 38 H 0.215 0.785 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.138 15.488 1.096 17.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.264 4.264 2 C 0.028 3.972 3 C -0.245 4.245 4 N -0.330 5.330 5 C 0.098 3.902 6 C -0.580 4.580 7 H 0.094 0.906 8 C -0.127 4.127 9 N -0.530 5.530 10 Si 0.702 3.298 11 H -0.198 1.198 12 H -0.209 1.209 13 H -0.189 1.189 14 C 0.362 3.638 15 O -0.396 6.396 16 C -0.169 4.169 17 C -0.047 4.047 18 C -0.162 4.162 19 C -0.091 4.091 20 C 0.469 3.531 21 F -0.154 7.154 22 F -0.146 7.146 23 F -0.153 7.153 24 N -0.181 5.181 25 C -0.027 4.027 26 H 0.102 0.898 27 H 0.099 0.901 28 H 0.090 0.910 29 H 0.124 0.876 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.085 0.915 33 H 0.052 0.948 34 H 0.058 0.942 35 H 0.076 0.924 36 H 0.173 0.827 37 H 0.169 0.831 38 H 0.230 0.770 Dipole moment (debyes) X Y Z Total from point charges -7.043 15.807 0.981 17.333 hybrid contribution 0.788 -0.986 0.520 1.365 sum -6.256 14.820 1.501 16.156 Atomic orbital electron populations 1.23750 0.96076 1.02572 1.04010 1.21127 0.93510 0.92486 0.90077 1.22776 1.02263 0.95904 1.03546 1.47761 1.50300 1.31617 1.03359 1.19793 0.89900 0.82653 0.97823 1.21368 0.95373 0.89256 1.51993 0.90595 1.24841 0.98277 0.95432 0.94187 1.69888 1.35722 0.98127 1.49295 0.86863 0.85906 0.78184 0.78880 1.19808 1.20937 1.18891 1.17708 0.84808 0.77695 0.83584 1.90741 1.52029 1.54651 1.42175 1.21614 0.98027 1.00312 0.96945 1.21650 0.91740 0.96099 0.95233 1.21687 0.97554 0.96828 1.00094 1.21004 0.94868 0.98306 0.94911 1.17878 0.84391 0.76559 0.74304 1.93230 1.95714 1.48126 1.78296 1.93229 1.87824 1.93554 1.39953 1.93209 1.71272 1.70743 1.80094 1.67295 1.05831 1.24966 1.19997 1.24941 0.91768 0.89204 0.96788 0.89783 0.90095 0.91030 0.87599 0.90667 0.90629 0.91533 0.94751 0.94178 0.92360 0.82718 0.83120 0.76980 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.21 -2.82 7.72 37.16 0.29 -2.54 16 2 C 0.13 1.91 3.27 -67.93 -0.22 1.69 16 3 C -0.19 -2.05 8.35 37.16 0.31 -1.74 16 4 N -0.60 -11.34 2.38 -168.58 -0.40 -11.74 16 5 C 0.22 4.94 4.38 -5.19 -0.02 4.92 16 6 C -0.54 -14.45 9.94 -34.44 -0.34 -14.80 16 7 H 0.08 2.22 8.06 -52.49 -0.42 1.80 16 8 C 0.08 2.09 5.47 -17.82 -0.10 1.99 16 9 N -0.89 -26.20 13.96 55.43 0.77 -25.43 16 10 Si 0.88 20.41 27.47 -169.99 -4.67 15.74 16 11 H -0.27 -6.41 7.11 56.52 0.40 -6.01 16 12 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 13 H -0.26 -5.79 6.54 56.52 0.37 -5.42 16 14 C 0.58 11.05 5.91 -12.33 -0.07 10.97 16 15 O -0.52 -11.57 16.80 5.32 0.09 -11.48 16 16 C -0.16 -2.59 4.23 -104.82 -0.44 -3.03 16 17 C -0.02 -0.31 9.83 -38.87 -0.38 -0.69 16 18 C -0.14 -1.73 9.42 -39.50 -0.37 -2.10 16 19 C 0.05 0.60 6.30 -82.51 -0.52 0.09 16 20 C 0.52 6.32 3.43 36.01 0.12 6.44 16 21 F -0.17 -2.05 17.30 2.25 0.04 -2.02 16 22 F -0.16 -2.11 17.03 2.25 0.04 -2.07 16 23 F -0.17 -1.94 16.43 2.25 0.04 -1.90 16 24 N -0.47 -6.54 9.92 -13.10 -0.13 -6.67 16 25 C 0.13 1.80 5.89 -17.13 -0.10 1.69 16 26 H 0.08 1.33 3.97 -60.85 -0.24 1.09 16 27 H 0.08 0.91 5.36 -51.93 -0.28 0.63 16 28 H 0.07 0.99 8.14 -51.93 -0.42 0.57 16 29 H 0.11 1.51 7.81 -51.93 -0.41 1.10 16 30 H 0.07 0.72 8.14 -51.93 -0.42 0.30 16 31 H 0.08 0.65 6.22 -51.93 -0.32 0.32 16 32 H 0.07 0.81 6.83 -51.93 -0.35 0.45 16 33 H 0.03 0.74 6.99 -51.93 -0.36 0.37 16 34 H 0.04 0.97 6.78 -51.93 -0.35 0.62 16 35 H 0.27 7.33 8.31 -40.82 -0.34 6.99 16 36 H 0.16 2.10 8.06 -52.49 -0.42 1.68 16 37 H 0.15 1.42 7.59 -52.49 -0.40 1.02 16 38 H 0.21 2.56 1.14 -53.07 -0.06 2.50 16 LS Contribution 319.56 15.07 4.82 4.82 Total: -1.00 -31.09 319.56 -4.90 -35.99 By element: Atomic # 1 Polarization: 5.50 SS G_CDS: -3.63 Total: 1.86 kcal Atomic # 6 Polarization: 4.75 SS G_CDS: -1.86 Total: 2.90 kcal Atomic # 7 Polarization: -44.08 SS G_CDS: 0.24 Total: -43.84 kcal Atomic # 8 Polarization: -11.57 SS G_CDS: 0.09 Total: -11.48 kcal Atomic # 9 Polarization: -6.10 SS G_CDS: 0.11 Total: -5.99 kcal Atomic # 14 Polarization: 20.41 SS G_CDS: -4.67 Total: 15.74 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -31.09 -4.90 -35.99 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000608814419.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.237 kcal (2) G-P(sol) polarization free energy of solvation -31.092 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.897 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.989 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.226 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds