Wall clock time and date at job start Tue Mar 31 2020 11:37:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.38877 * 120.00285 * 2 1 4 4 C 1.38962 * 120.17178 * 354.74197 * 3 2 1 5 5 C 1.37956 * 120.05936 * 180.25324 * 4 3 2 6 6 C 1.38616 * 120.42411 * 359.44952 * 5 4 3 7 7 C 1.50700 * 119.82349 * 180.27633 * 6 5 4 8 8 F 1.39893 * 109.47340 * 270.27249 * 7 6 5 9 9 F 1.39904 * 109.46924 * 30.28000 * 7 6 5 10 10 F 1.39901 * 109.46788 * 150.27100 * 7 6 5 11 11 C 1.37752 * 120.35025 * 0.55365 * 6 5 4 12 12 C 1.39739 * 119.92588 * 359.72351 * 11 6 5 13 13 C 1.47431 * 120.20317 * 179.97438 * 12 11 6 14 14 O 1.21603 * 119.99914 * 127.56957 * 13 12 11 15 15 N 1.34780 * 120.00185 * 307.56183 * 13 12 11 16 16 C 1.46505 * 119.99689 * 3.99663 * 15 13 12 17 17 C 1.46494 * 120.00111 * 184.00053 * 15 13 12 18 18 C 1.50703 * 109.46942 * 89.99890 * 17 15 13 19 19 H 1.07992 * 120.00459 * 0.02562 * 18 17 15 20 20 C 1.37879 * 119.99733 * 179.97438 * 18 17 15 21 21 N 1.31523 * 119.99989 * 0.02562 * 20 18 17 22 22 Si 1.86803 * 120.00035 * 180.02562 * 20 18 17 23 23 H 1.48495 * 109.47310 * 89.99725 * 22 20 18 24 24 H 1.48503 * 109.46805 * 210.00022 * 22 20 18 25 25 H 1.48494 * 109.46866 * 329.99561 * 22 20 18 26 26 H 1.08995 * 109.47385 * 180.02562 * 1 2 3 27 27 H 1.08996 * 109.47004 * 300.00651 * 1 2 3 28 28 H 1.09005 * 109.46670 * 60.00221 * 1 2 3 29 29 H 0.96996 * 119.99634 * 179.97438 * 2 1 3 30 30 H 1.07997 * 119.96822 * 359.97438 * 4 3 2 31 31 H 1.08004 * 119.78611 * 179.70422 * 5 4 3 32 32 H 1.07993 * 120.03369 * 179.74664 * 11 6 5 33 33 H 1.09001 * 109.46636 * 84.55103 * 16 15 13 34 34 H 1.08999 * 109.46983 * 204.55119 * 16 15 13 35 35 H 1.08995 * 109.47432 * 324.55359 * 16 15 13 36 36 H 1.08998 * 109.46974 * 209.99960 * 17 15 13 37 37 H 1.08997 * 109.47324 * 330.00110 * 17 15 13 38 38 H 0.97004 * 119.99542 * 179.97438 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1595 1.2027 0.0000 4 6 1.4727 2.4057 -0.1101 5 6 2.1653 3.5988 -0.1151 6 6 3.5466 3.6091 0.0007 7 6 4.2890 4.9206 -0.0001 8 9 4.6238 5.2662 -1.3136 9 9 3.4763 5.9168 0.5517 10 9 5.4560 4.7962 0.7613 11 6 4.2447 2.4267 0.1107 12 6 3.5584 1.2095 0.1116 13 6 4.2995 -0.0597 0.2285 14 8 3.9862 -0.8706 1.0788 15 7 5.3241 -0.3212 -0.6072 16 6 5.7579 0.6910 -1.5734 17 6 6.0039 -1.6176 -0.5493 18 6 5.3242 -2.5834 -1.4855 19 1 4.4715 -2.2635 -2.0658 20 6 5.7917 -3.8753 -1.6019 21 7 6.8305 -4.2648 -0.8955 22 14 4.9497 -5.0723 -2.7628 23 1 5.5804 -4.9873 -4.1045 24 1 5.0900 -6.4538 -2.2365 25 1 3.5094 -4.7274 -2.8702 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 1.9499 -0.8400 0.0004 30 1 0.3962 2.4064 -0.1963 31 1 1.6274 4.5310 -0.2057 32 1 5.3211 2.4405 0.1965 33 1 6.4537 1.3781 -1.0920 34 1 6.2519 0.2030 -2.4136 35 1 4.8909 1.2448 -1.9334 36 1 7.0453 -1.4953 -0.8467 37 1 5.9598 -2.0060 0.4681 38 1 7.1592 -5.1738 -0.9772 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000094595317.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:37:34 Heat of formation + Delta-G solvation = -155.164930 kcal Electronic energy + Delta-G solvation = -26869.816719 eV Core-core repulsion = 22490.364275 eV Total energy + Delta-G solvation = -4379.452444 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 316.114 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -50.11353 -47.64211 -47.56887 -40.27862 -38.15377 -36.00001 -34.79456 -32.76700 -31.35088 -30.74071 -27.86001 -26.82676 -26.03143 -24.70025 -24.07554 -22.38377 -21.35525 -19.48340 -18.44519 -18.42291 -17.72066 -17.39732 -16.57476 -16.25956 -16.12510 -15.36174 -14.72132 -14.52738 -14.44763 -14.39858 -14.28186 -14.07301 -13.98329 -13.79223 -13.74736 -13.74360 -13.41416 -12.91862 -12.71967 -12.49231 -12.18886 -12.11141 -11.89143 -11.72213 -11.30187 -11.25628 -10.96793 -10.64381 -10.44348 -10.23045 -9.72257 -9.21512 -8.97013 -8.50192 -7.76734 -7.62271 -6.11021 -4.16683 1.03506 1.18327 2.72607 3.13408 3.24666 3.31398 3.33935 3.37461 3.58445 3.81038 3.94299 4.12234 4.37654 4.49179 4.69824 4.77102 5.02678 5.09863 5.23014 5.25142 5.31240 5.42168 5.54795 5.67118 5.74856 5.88092 5.94935 5.99517 6.15921 6.20994 6.50193 6.96613 7.16161 7.36589 7.43676 7.60866 7.84583 8.15036 8.29807 8.79074 8.95585 9.48597 10.96958 Molecular weight = 316.11amu Principal moments of inertia in cm(-1) A = 0.016528 B = 0.004033 C = 0.003510 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1693.691226 B = 6940.386439 C = 7975.728330 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.087 3.913 2 N -0.726 5.726 3 C 0.288 3.712 4 C -0.208 4.208 5 C -0.010 4.010 6 C -0.259 4.259 7 C 0.515 3.485 8 F -0.181 7.181 9 F -0.183 7.183 10 F -0.180 7.180 11 C 0.008 3.992 12 C -0.199 4.199 13 C 0.554 3.446 14 O -0.540 6.540 15 N -0.591 5.591 16 C 0.080 3.920 17 C 0.243 3.757 18 C -0.529 4.529 19 H 0.057 0.943 20 C 0.062 3.938 21 N -0.892 5.892 22 Si 0.899 3.101 23 H -0.280 1.280 24 H -0.285 1.285 25 H -0.275 1.275 26 H 0.078 0.922 27 H 0.057 0.943 28 H 0.056 0.944 29 H 0.418 0.582 30 H 0.135 0.865 31 H 0.133 0.867 32 H 0.138 0.862 33 H 0.046 0.954 34 H 0.077 0.923 35 H 0.059 0.941 36 H 0.035 0.965 37 H 0.047 0.953 38 H 0.264 0.736 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.010 17.096 -0.195 19.812 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.352 5.352 3 C 0.177 3.823 4 C -0.231 4.231 5 C -0.029 4.029 6 C -0.262 4.262 7 C 0.461 3.539 8 F -0.162 7.162 9 F -0.164 7.164 10 F -0.161 7.161 11 C -0.012 4.012 12 C -0.207 4.207 13 C 0.340 3.660 14 O -0.419 6.419 15 N -0.321 5.321 16 C -0.064 4.064 17 C 0.124 3.876 18 C -0.568 4.568 19 H 0.075 0.925 20 C -0.140 4.140 21 N -0.531 5.531 22 Si 0.726 3.274 23 H -0.206 1.206 24 H -0.210 1.210 25 H -0.200 1.200 26 H 0.097 0.903 27 H 0.076 0.924 28 H 0.075 0.925 29 H 0.256 0.744 30 H 0.153 0.847 31 H 0.151 0.849 32 H 0.156 0.844 33 H 0.064 0.936 34 H 0.096 0.904 35 H 0.078 0.922 36 H 0.053 0.947 37 H 0.065 0.935 38 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges -10.237 16.456 0.274 19.382 hybrid contribution -0.038 -0.753 -0.740 1.056 sum -10.275 15.703 -0.466 18.772 Atomic orbital electron populations 1.21673 0.79727 1.03183 1.01200 1.44767 1.06388 1.06534 1.77485 1.17846 0.89694 0.86949 0.87798 1.20497 1.00069 0.90136 1.12370 1.20643 0.91833 0.98357 0.92109 1.19439 0.94985 0.91450 1.20373 1.18218 0.77106 0.85005 0.73524 1.93210 1.92847 1.93337 1.36820 1.93157 1.72951 1.64540 1.85769 1.93183 1.50679 1.96063 1.76214 1.20817 1.00057 0.89650 0.90633 1.19562 0.92253 0.94553 1.14304 1.17888 0.80774 0.85283 0.82045 1.90766 1.67178 1.48673 1.35238 1.48129 1.32597 1.17458 1.33931 1.21784 0.99491 0.91764 0.93398 1.19371 0.91949 0.77246 0.99012 1.21394 1.15010 0.96002 1.24399 0.92505 1.24936 0.95054 0.98011 0.96000 1.69936 1.24207 1.18529 1.40405 0.86494 0.79799 0.80325 0.80757 1.20575 1.21048 1.20007 0.90283 0.92429 0.92499 0.74356 0.84720 0.84900 0.84422 0.93582 0.90407 0.92200 0.94724 0.93529 0.92619 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.83 9.96 59.85 0.60 1.43 16 2 N -0.73 -10.34 5.71 -65.20 -0.37 -10.71 16 3 C 0.29 4.19 6.64 -83.61 -0.56 3.64 16 4 C -0.21 -2.37 9.30 -39.42 -0.37 -2.74 16 5 C -0.01 -0.11 9.38 -39.55 -0.37 -0.48 16 6 C -0.26 -3.22 5.45 -104.66 -0.57 -3.79 16 7 C 0.52 6.15 3.36 36.01 0.12 6.27 16 8 F -0.18 -2.19 17.30 2.25 0.04 -2.15 16 9 F -0.18 -2.09 16.45 2.25 0.04 -2.05 16 10 F -0.18 -2.28 16.44 2.25 0.04 -2.24 16 11 C 0.01 0.11 7.25 -39.20 -0.28 -0.17 16 12 C -0.20 -3.27 4.77 -104.80 -0.50 -3.77 16 13 C 0.55 11.47 6.51 -12.52 -0.08 11.39 16 14 O -0.54 -13.11 15.40 5.28 0.08 -13.02 16 15 N -0.59 -12.42 2.86 -184.23 -0.53 -12.95 16 16 C 0.08 1.30 9.13 59.85 0.55 1.85 16 17 C 0.24 6.23 5.17 -5.20 -0.03 6.20 16 18 C -0.53 -14.53 9.39 -34.44 -0.32 -14.85 16 19 H 0.06 1.55 7.81 -52.49 -0.41 1.14 16 20 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 21 N -0.89 -25.96 13.29 55.43 0.74 -25.23 16 22 Si 0.90 21.24 29.54 -169.99 -5.02 16.22 16 23 H -0.28 -6.46 7.11 56.52 0.40 -6.06 16 24 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 25 H -0.28 -6.43 7.11 56.52 0.40 -6.02 16 26 H 0.08 0.67 8.14 -51.93 -0.42 0.25 16 27 H 0.06 0.48 8.12 -51.93 -0.42 0.06 16 28 H 0.06 0.46 7.74 -51.93 -0.40 0.05 16 29 H 0.42 7.13 6.92 -40.82 -0.28 6.84 16 30 H 0.14 1.17 6.72 -52.49 -0.35 0.82 16 31 H 0.13 1.11 7.59 -52.48 -0.40 0.71 16 32 H 0.14 1.87 6.19 -52.49 -0.32 1.55 16 33 H 0.05 0.65 7.19 -51.93 -0.37 0.27 16 34 H 0.08 1.28 8.03 -51.93 -0.42 0.87 16 35 H 0.06 0.88 6.46 -51.93 -0.34 0.55 16 36 H 0.03 0.90 8.07 -51.93 -0.42 0.48 16 37 H 0.05 1.34 7.37 -51.93 -0.38 0.96 16 38 H 0.26 7.26 8.31 -40.82 -0.34 6.92 16 LS Contribution 334.72 15.07 5.04 5.04 Total: -1.00 -31.47 334.72 -5.93 -37.40 By element: Atomic # 1 Polarization: 7.17 SS G_CDS: -4.08 Total: 3.09 kcal Atomic # 6 Polarization: 8.51 SS G_CDS: -1.91 Total: 6.60 kcal Atomic # 7 Polarization: -48.73 SS G_CDS: -0.16 Total: -48.89 kcal Atomic # 8 Polarization: -13.11 SS G_CDS: 0.08 Total: -13.02 kcal Atomic # 9 Polarization: -6.55 SS G_CDS: 0.11 Total: -6.44 kcal Atomic # 14 Polarization: 21.24 SS G_CDS: -5.02 Total: 16.22 kcal Total LS contribution 5.04 Total: 5.04 kcal Total: -31.47 -5.93 -37.40 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000094595317.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.763 kcal (2) G-P(sol) polarization free energy of solvation -31.468 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -149.232 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.933 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.402 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.165 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds