Wall clock time and date at job start Tue Mar 31 2020 11:25:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.52997 * 109.47232 * 2 1 4 4 C 1.53002 * 109.47215 * 119.99627 * 2 1 3 5 5 N 1.46491 * 109.47641 * 175.00150 * 4 2 1 6 6 C 1.34219 * 125.74727 * 124.99796 * 5 4 2 7 7 C 1.38128 * 107.41210 * 179.97438 * 6 5 4 8 8 C 1.47285 * 126.42705 * 180.26386 * 7 6 5 9 9 O 1.21523 * 119.99764 * 179.68225 * 8 7 6 10 10 O 1.34756 * 120.00378 * 359.68737 * 8 7 6 11 11 C 1.45195 * 117.00317 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.47237 * 179.97438 * 11 10 8 13 13 C 1.50696 * 109.47345 * 180.02562 * 12 11 10 14 14 H 1.08004 * 119.99941 * 0.02562 * 13 12 11 15 15 C 1.37869 * 120.00318 * 179.97438 * 13 12 11 16 16 N 1.31516 * 120.00121 * 0.02562 * 15 13 12 17 17 Si 1.86803 * 120.00339 * 179.97438 * 15 13 12 18 18 H 1.48503 * 109.46619 * 60.00342 * 17 15 13 19 19 H 1.48491 * 109.47445 * 180.02562 * 17 15 13 20 20 H 1.48496 * 109.47422 * 300.00647 * 17 15 13 21 21 C 1.41345 * 107.14311 * 359.97438 * 7 6 5 22 22 C 1.50696 * 125.99069 * 180.02562 * 21 7 6 23 23 F 1.39903 * 109.47104 * 210.00178 * 22 21 7 24 24 F 1.39900 * 109.47463 * 329.99975 * 22 21 7 25 25 N 1.30433 * 108.01375 * 0.02562 * 21 7 6 26 26 H 1.08997 * 109.46983 * 299.99829 * 1 2 3 27 27 H 1.08995 * 109.46849 * 60.00791 * 1 2 3 28 28 H 1.09004 * 109.46567 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47424 * 239.99586 * 2 1 3 30 30 H 1.09002 * 109.47254 * 59.99482 * 3 2 1 31 31 H 1.08999 * 109.47260 * 179.97438 * 3 2 1 32 32 H 1.09001 * 109.47040 * 300.00146 * 3 2 1 33 33 H 1.09010 * 109.46923 * 54.99845 * 4 2 1 34 34 H 1.09005 * 109.47349 * 295.00676 * 4 2 1 35 35 H 1.08005 * 126.29425 * 0.02562 * 6 5 4 36 36 H 1.08994 * 109.47072 * 299.99989 * 11 10 8 37 37 H 1.09003 * 109.46811 * 59.99897 * 11 10 8 38 38 H 1.08999 * 109.47325 * 300.00586 * 12 11 10 39 39 H 1.09001 * 109.46585 * 60.00220 * 12 11 10 40 40 H 0.96995 * 120.00626 * 179.97438 * 16 15 13 41 41 H 1.09003 * 109.47291 * 90.00098 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0401 -0.7212 1.2493 5 7 3.5000 -0.8263 1.1907 6 6 4.3555 -0.3963 2.1313 7 6 5.6327 -0.6849 1.6915 8 6 6.8890 -0.3969 2.4042 9 8 7.9539 -0.7085 1.9085 10 8 6.8578 0.2120 3.6059 11 6 8.1340 0.4639 4.2507 12 6 7.8987 1.1570 5.5943 13 6 9.2233 1.4190 6.2633 14 1 10.1414 1.1214 5.7784 15 6 9.2634 2.0396 7.4937 16 7 8.1456 2.4025 8.0840 17 14 10.9054 2.3638 8.3233 18 1 11.7353 3.2364 7.4542 19 1 10.6770 3.0366 9.6272 20 1 11.6094 1.0758 8.5480 21 6 5.5073 -1.3146 0.4323 22 6 6.6419 -1.8086 -0.4277 23 9 6.2741 -1.7304 -1.7752 24 9 7.7738 -1.0167 -0.2066 25 7 4.2374 -1.3929 0.1451 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5137 -0.8900 28 1 -0.3632 -1.0277 0.0005 29 1 1.8934 -0.5139 -0.8899 30 1 1.6767 1.9563 0.8899 31 1 3.1300 1.4425 0.0005 32 1 1.6767 1.9563 -0.8900 33 1 1.6054 -1.7198 1.2953 34 1 1.7516 -0.1582 2.1371 35 1 4.0934 0.0860 3.0615 36 1 8.6510 -0.4815 4.4148 37 1 8.7428 1.1051 3.6132 38 1 7.3817 2.1024 5.4298 39 1 7.2897 0.5161 6.2319 40 1 8.1737 2.8388 8.9498 41 1 6.8674 -2.8440 -0.1721 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000835265843.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:25:45 Heat of formation + Delta-G solvation = -127.516679 kcal Electronic energy + Delta-G solvation = -26307.001037 eV Core-core repulsion = 22052.207816 eV Total energy + Delta-G solvation = -4254.793220 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 316.139 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -48.87810 -46.86079 -41.77167 -39.42598 -36.97153 -35.86145 -33.33084 -32.94215 -31.09890 -29.97980 -28.28325 -27.62010 -26.02031 -24.91815 -22.97610 -21.41535 -21.14193 -20.58702 -19.66336 -17.95099 -17.51520 -17.04622 -16.90418 -16.25567 -16.21861 -16.02273 -15.74033 -15.50649 -14.89826 -14.49316 -14.13237 -13.94795 -13.56693 -13.42461 -13.25949 -13.02599 -12.86020 -12.75452 -12.66614 -12.41715 -12.33352 -11.77323 -11.52877 -11.49610 -11.36806 -11.18171 -11.05578 -11.00807 -10.70094 -10.67469 -10.10305 -9.89400 -9.59254 -9.57892 -9.30088 -8.99787 -8.43199 -6.10055 -4.13920 1.24673 1.60420 1.83508 3.21226 3.31063 3.34503 3.35007 3.39154 3.52230 3.87279 4.13537 4.26917 4.32520 4.40487 4.51971 4.62538 4.79779 4.85060 4.92940 5.05936 5.13349 5.19140 5.26774 5.33067 5.39690 5.43787 5.51596 5.62332 5.79301 5.80694 5.90654 6.15470 6.17855 6.45178 6.67943 7.04771 7.09544 7.57503 7.63602 7.88333 8.23088 8.36269 8.91536 9.50454 11.01509 Molecular weight = 316.14amu Principal moments of inertia in cm(-1) A = 0.014524 B = 0.003009 C = 0.002565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1927.441380 B = 9303.863868 C =10912.183458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C -0.110 4.110 3 C -0.151 4.151 4 C 0.130 3.870 5 N -0.348 5.348 6 C 0.132 3.868 7 C -0.246 4.246 8 C 0.526 3.474 9 O -0.502 6.502 10 O -0.358 6.358 11 C 0.078 3.922 12 C 0.026 3.974 13 C -0.526 4.526 14 H 0.059 0.941 15 C 0.061 3.939 16 N -0.892 5.892 17 Si 0.899 3.101 18 H -0.275 1.275 19 H -0.286 1.286 20 H -0.275 1.275 21 C 0.051 3.949 22 C 0.356 3.644 23 F -0.196 7.196 24 F -0.160 7.160 25 N -0.258 5.258 26 H 0.060 0.940 27 H 0.064 0.936 28 H 0.059 0.941 29 H 0.088 0.912 30 H 0.059 0.941 31 H 0.055 0.945 32 H 0.061 0.939 33 H 0.093 0.907 34 H 0.106 0.894 35 H 0.201 0.799 36 H 0.059 0.941 37 H 0.059 0.941 38 H 0.027 0.973 39 H 0.027 0.973 40 H 0.263 0.737 41 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.502 -7.351 -16.065 24.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C -0.129 4.129 3 C -0.208 4.208 4 C 0.010 3.990 5 N -0.127 5.127 6 C -0.019 4.019 7 C -0.259 4.259 8 C 0.369 3.631 9 O -0.390 6.390 10 O -0.274 6.274 11 C 0.006 3.994 12 C -0.011 4.011 13 C -0.564 4.564 14 H 0.077 0.923 15 C -0.141 4.141 16 N -0.530 5.530 17 Si 0.727 3.273 18 H -0.200 1.200 19 H -0.212 1.212 20 H -0.201 1.201 21 C -0.118 4.118 22 C 0.300 3.700 23 F -0.178 7.178 24 F -0.141 7.141 25 N -0.080 5.080 26 H 0.079 0.921 27 H 0.083 0.917 28 H 0.078 0.922 29 H 0.106 0.894 30 H 0.078 0.922 31 H 0.074 0.926 32 H 0.080 0.920 33 H 0.112 0.888 34 H 0.124 0.876 35 H 0.217 0.783 36 H 0.077 0.923 37 H 0.078 0.922 38 H 0.046 0.954 39 H 0.046 0.954 40 H 0.073 0.927 41 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -17.241 -7.689 -16.877 25.322 hybrid contribution 1.493 0.611 1.135 1.973 sum -15.748 -7.078 -15.742 23.365 Atomic orbital electron populations 1.21785 0.93533 1.02302 1.02696 1.21450 0.96488 0.97103 0.97898 1.21863 1.01515 0.95059 1.02373 1.22151 0.73050 1.02958 1.00823 1.48549 1.07236 1.43240 1.13652 1.23442 0.88584 0.94883 0.94953 1.19304 0.92253 1.16540 0.97844 1.19865 0.87617 0.75356 0.80216 1.90891 1.31361 1.50051 1.66741 1.86533 1.39283 1.70482 1.31114 1.23620 0.80212 1.00258 0.95329 1.19154 0.98098 0.95959 0.87933 1.20958 0.92122 1.39641 1.03653 0.92258 1.24970 0.96787 0.95308 0.97047 1.69956 1.26354 1.40410 1.16306 0.86536 0.83613 0.78613 0.78573 1.20042 1.21168 1.20057 1.22927 0.93711 1.00101 0.95068 1.19391 0.79358 0.95630 0.75592 1.93018 1.91987 1.97514 1.35233 1.93207 1.50384 1.76645 1.93895 1.77095 1.02375 1.19117 1.09392 0.92140 0.91743 0.92199 0.89383 0.92240 0.92611 0.92031 0.88835 0.87569 0.78253 0.92271 0.92242 0.95434 0.95443 0.92701 0.85293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -0.64 9.19 37.16 0.34 -0.30 16 2 C -0.11 -0.71 3.00 -90.62 -0.27 -0.98 16 3 C -0.15 -1.12 9.08 37.16 0.34 -0.78 16 4 C 0.13 0.82 5.88 -4.05 -0.02 0.79 16 5 N -0.35 -3.54 3.10 -60.79 -0.19 -3.73 16 6 C 0.13 1.50 11.29 -16.55 -0.19 1.31 16 7 C -0.25 -3.64 6.09 -105.08 -0.64 -4.28 16 8 C 0.53 9.65 7.91 34.41 0.27 9.92 16 9 O -0.50 -10.22 13.06 -19.28 -0.25 -10.47 16 10 O -0.36 -7.09 10.05 -40.64 -0.41 -7.50 16 11 C 0.08 1.74 5.41 37.16 0.20 1.94 16 12 C 0.03 0.66 5.35 -27.88 -0.15 0.51 16 13 C -0.53 -14.72 9.11 -34.44 -0.31 -15.03 16 14 H 0.06 1.61 7.74 -52.48 -0.41 1.20 16 15 C 0.06 1.72 5.46 -17.82 -0.10 1.62 16 16 N -0.89 -26.17 13.29 55.43 0.74 -25.44 16 17 Si 0.90 21.35 29.54 -169.99 -5.02 16.33 16 18 H -0.27 -6.43 7.11 56.52 0.40 -6.03 16 19 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 20 H -0.28 -6.42 7.11 56.52 0.40 -6.02 16 21 C 0.05 0.70 6.89 -82.01 -0.56 0.14 16 22 C 0.36 4.67 5.65 36.00 0.20 4.88 16 23 F -0.20 -2.63 17.27 2.25 0.04 -2.59 16 24 F -0.16 -2.65 13.60 2.25 0.03 -2.62 16 25 N -0.26 -3.26 12.17 33.90 0.41 -2.85 16 26 H 0.06 0.23 8.14 -51.93 -0.42 -0.20 16 27 H 0.06 0.29 8.14 -51.93 -0.42 -0.14 16 28 H 0.06 0.23 8.14 -51.93 -0.42 -0.19 16 29 H 0.09 0.72 8.04 -51.93 -0.42 0.30 16 30 H 0.06 0.38 8.14 -51.93 -0.42 -0.04 16 31 H 0.05 0.55 7.75 -51.93 -0.40 0.15 16 32 H 0.06 0.43 8.14 -51.93 -0.42 0.01 16 33 H 0.09 0.48 8.14 -51.92 -0.42 0.06 16 34 H 0.11 0.43 8.06 -51.93 -0.42 0.01 16 35 H 0.20 1.75 8.06 -52.48 -0.42 1.33 16 36 H 0.06 1.30 8.14 -51.93 -0.42 0.88 16 37 H 0.06 1.33 8.14 -51.93 -0.42 0.90 16 38 H 0.03 0.74 8.14 -51.93 -0.42 0.32 16 39 H 0.03 0.74 8.14 -51.93 -0.42 0.31 16 40 H 0.26 7.27 8.31 -40.82 -0.34 6.94 16 41 H 0.13 1.26 8.14 -51.93 -0.42 0.84 16 LS Contribution 361.22 15.07 5.44 5.44 Total: -1.00 -33.36 361.22 -5.95 -39.31 By element: Atomic # 1 Polarization: 0.20 SS G_CDS: -5.85 Total: -5.65 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -0.89 Total: -0.25 kcal Atomic # 7 Polarization: -32.98 SS G_CDS: 0.96 Total: -32.02 kcal Atomic # 8 Polarization: -17.31 SS G_CDS: -0.66 Total: -17.97 kcal Atomic # 9 Polarization: -5.27 SS G_CDS: 0.07 Total: -5.20 kcal Atomic # 14 Polarization: 21.35 SS G_CDS: -5.02 Total: 16.33 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -33.36 -5.95 -39.31 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000835265843.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.202 kcal (2) G-P(sol) polarization free energy of solvation -33.363 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -121.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.951 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.314 kcal (6) G-S(sol) free energy of system = (1) + (5) -127.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds