Wall clock time and date at job start Tue Mar 31 2020 11:31:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13606 * 1 3 3 C 1.43197 * 179.97438 * 2 1 4 4 C 1.39751 * 120.09848 * 231.26771 * 3 2 1 5 5 C 1.37728 * 119.90968 * 180.02562 * 4 3 2 6 6 C 1.38968 * 120.09414 * 359.97438 * 5 4 3 7 7 O 1.35758 * 119.90914 * 180.02562 * 6 5 4 8 8 C 1.42889 * 117.00170 * 180.02562 * 7 6 5 9 9 C 1.53004 * 109.47263 * 180.02562 * 8 7 6 10 10 C 1.53004 * 109.47240 * 180.02562 * 9 8 7 11 11 N 1.46899 * 109.46867 * 179.97438 * 10 9 8 12 12 C 1.48535 * 111.00098 * 287.39520 * 11 10 9 13 13 C 1.55103 * 103.28125 * 200.33413 * 12 11 10 14 14 C 1.54601 * 102.84538 * 37.30582 * 13 12 11 15 15 O 1.42899 * 110.30773 * 97.11731 * 14 13 12 16 16 C 1.50700 * 110.30664 * 219.18372 * 14 13 12 17 17 H 1.07999 * 119.99988 * 117.20955 * 16 14 13 18 18 C 1.37885 * 120.00047 * 297.21135 * 16 14 13 19 19 N 1.31518 * 119.99792 * 359.72305 * 18 16 14 20 20 Si 1.86795 * 120.00009 * 180.02562 * 18 16 14 21 21 H 1.48501 * 109.47088 * 89.99795 * 20 18 16 22 22 H 1.48495 * 109.47293 * 209.99997 * 20 18 16 23 23 H 1.48507 * 109.47015 * 329.99955 * 20 18 16 24 24 C 1.47908 * 110.99869 * 169.99687 * 11 10 9 25 25 C 1.38968 * 120.18589 * 0.27736 * 6 5 4 26 26 C 1.37733 * 120.09496 * 359.44792 * 25 6 5 27 27 H 1.08003 * 120.04264 * 359.97438 * 4 3 2 28 28 H 1.08002 * 119.95581 * 180.02562 * 5 4 3 29 29 H 1.09003 * 109.47732 * 59.99876 * 8 7 6 30 30 H 1.09005 * 109.47489 * 299.99551 * 8 7 6 31 31 H 1.08997 * 109.46981 * 59.99731 * 9 8 7 32 32 H 1.09001 * 109.46415 * 299.99597 * 9 8 7 33 33 H 1.08997 * 109.47170 * 59.99432 * 10 9 8 34 34 H 1.08999 * 109.46733 * 299.99873 * 10 9 8 35 35 H 1.08996 * 110.66618 * 318.71599 * 12 11 10 36 36 H 1.08994 * 110.66413 * 81.67735 * 12 11 10 37 37 H 1.09003 * 110.70696 * 278.99712 * 13 12 11 38 38 H 1.09005 * 110.80877 * 155.66092 * 13 12 11 39 39 H 0.96699 * 114.00025 * 62.78843 * 15 14 13 40 40 H 0.97000 * 119.99468 * 179.97438 * 19 18 16 41 41 H 1.09001 * 109.91016 * 26.49117 * 24 11 10 42 42 H 1.08993 * 109.91789 * 265.20266 * 24 11 10 43 43 H 1.08000 * 119.94809 * 179.70547 * 25 6 5 44 44 H 1.07997 * 120.04710 * 180.29587 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1361 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2685 0.7575 0.9432 5 6 4.6458 0.7556 0.9393 6 6 5.3390 0.0022 -0.0004 7 8 6.6966 0.0028 -0.0005 8 6 7.3456 -0.7931 -0.9940 9 6 8.8624 -0.6676 -0.8373 10 6 9.5573 -1.5193 -1.9015 11 7 11.0136 -1.3983 -1.7513 12 6 11.4863 -0.0646 -2.2031 13 6 12.9955 -0.2954 -2.4766 14 6 13.0222 -1.7198 -3.0769 15 8 13.0530 -1.6560 -4.5041 16 6 14.2161 -2.4820 -2.5624 17 1 14.0732 -3.3732 -1.9694 18 6 15.4909 -2.0414 -2.8486 19 7 15.6649 -0.9590 -3.5752 20 14 16.9708 -2.9865 -2.2114 21 1 17.3694 -4.0127 -3.2080 22 1 18.0996 -2.0476 -1.9892 23 1 16.6199 -3.6506 -0.9303 24 6 11.7177 -2.3844 -2.5996 25 6 4.6464 -0.7477 -0.9434 26 6 3.2691 -0.7560 -0.9430 27 1 2.7305 1.3436 1.6736 28 1 5.1879 1.3399 1.6681 29 1 7.0526 -0.4471 -1.9853 30 1 7.0532 -1.8361 -0.8721 31 1 9.1551 -1.0139 0.1539 32 1 9.1551 0.3753 -0.9589 33 1 9.2645 -1.1726 -2.8925 34 1 9.2646 -2.5622 -1.7803 35 1 10.9729 0.2365 -3.1161 36 1 11.3437 0.6797 -1.4197 37 1 13.5657 -0.2573 -1.5483 38 1 13.3749 0.4326 -3.1937 39 1 13.8427 -1.2275 -4.8617 40 1 16.5618 -0.6489 -3.7762 41 1 11.0982 -2.6452 -3.4577 42 1 11.9469 -3.2775 -2.0186 43 1 5.1890 -1.3280 -1.6749 44 1 2.7317 -1.3428 -1.6732 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000829974418.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:31:51 Heat of formation + Delta-G solvation = -33.086101 kcal Electronic energy + Delta-G solvation = -24731.220874 eV Core-core repulsion = 21034.752000 eV Total energy + Delta-G solvation = -3696.468874 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -40.65345 -38.66414 -38.24418 -36.49632 -35.30288 -32.90765 -32.10626 -31.65977 -30.73681 -29.10739 -28.07028 -25.77679 -24.19771 -23.74556 -22.93195 -21.55273 -20.19221 -19.42305 -19.31013 -18.44909 -17.11091 -16.56856 -16.51806 -15.35250 -15.15948 -14.95185 -14.69261 -14.43667 -14.37435 -14.19361 -14.03876 -13.95710 -13.76955 -13.12769 -12.96164 -12.76209 -12.50399 -12.25073 -12.18545 -11.98206 -11.73212 -11.47849 -11.28550 -11.19652 -10.98132 -10.93176 -10.70636 -10.50616 -10.43164 -10.31882 -9.95597 -9.61602 -9.18499 -8.67123 -8.59949 -8.13865 -7.87389 -6.21306 -4.27401 0.41255 0.81082 2.32266 2.55730 2.72829 3.23046 3.30263 3.34020 3.44326 3.54559 4.25493 4.29611 4.32340 4.46650 4.63944 4.71430 4.84176 4.97095 5.02906 5.06461 5.13348 5.26157 5.40665 5.44604 5.56906 5.66161 5.67956 5.79118 5.84040 5.91605 6.02541 6.09689 6.13314 6.19846 6.22192 6.40086 6.45794 6.89545 6.95960 7.01850 7.14746 7.24841 7.49513 7.60847 7.65968 7.82334 8.14509 8.74246 9.39047 9.48910 10.86408 Molecular weight = 316.16amu Principal moments of inertia in cm(-1) A = 0.043022 B = 0.001810 C = 0.001796 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 650.674694 B =15465.534693 C =15587.333510 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.428 5.428 2 C 0.261 3.739 3 C -0.080 4.080 4 C -0.029 4.029 5 C -0.156 4.156 6 C 0.169 3.831 7 O -0.305 6.305 8 C 0.058 3.942 9 C -0.112 4.112 10 C 0.051 3.949 11 N -0.514 5.514 12 C 0.030 3.970 13 C -0.117 4.117 14 C 0.242 3.758 15 O -0.595 6.595 16 C -0.528 4.528 17 H 0.062 0.938 18 C 0.068 3.932 19 N -0.899 5.899 20 Si 0.900 3.100 21 H -0.280 1.280 22 H -0.286 1.286 23 H -0.273 1.273 24 C 0.055 3.945 25 C -0.214 4.214 26 C -0.026 4.026 27 H 0.139 0.861 28 H 0.143 0.857 29 H 0.066 0.934 30 H 0.068 0.932 31 H 0.083 0.917 32 H 0.074 0.926 33 H 0.034 0.966 34 H 0.071 0.929 35 H 0.033 0.967 36 H 0.065 0.935 37 H 0.068 0.932 38 H 0.065 0.935 39 H 0.383 0.617 40 H 0.266 0.734 41 H 0.036 0.964 42 H 0.079 0.921 43 H 0.141 0.859 44 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.964 3.245 5.982 20.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.104 5.104 2 C -0.054 4.054 3 C -0.084 4.084 4 C -0.049 4.049 5 C -0.175 4.175 6 C 0.121 3.879 7 O -0.217 6.217 8 C -0.017 4.017 9 C -0.150 4.150 10 C -0.078 4.078 11 N -0.238 5.238 12 C -0.098 4.098 13 C -0.156 4.156 14 C 0.202 3.798 15 O -0.405 6.405 16 C -0.567 4.567 17 H 0.080 0.920 18 C -0.134 4.134 19 N -0.540 5.540 20 Si 0.728 3.272 21 H -0.206 1.206 22 H -0.211 1.211 23 H -0.198 1.198 24 C -0.072 4.072 25 C -0.233 4.233 26 C -0.046 4.046 27 H 0.157 0.843 28 H 0.161 0.839 29 H 0.084 0.916 30 H 0.086 0.914 31 H 0.102 0.898 32 H 0.093 0.907 33 H 0.052 0.948 34 H 0.089 0.911 35 H 0.051 0.949 36 H 0.084 0.916 37 H 0.087 0.913 38 H 0.083 0.917 39 H 0.234 0.766 40 H 0.076 0.924 41 H 0.054 0.946 42 H 0.098 0.902 43 H 0.158 0.842 44 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -20.886 3.051 6.639 22.127 hybrid contribution 1.596 -0.171 -0.797 1.792 sum -19.290 2.880 5.842 20.360 Atomic orbital electron populations 1.81272 1.12113 1.08784 1.08245 1.25671 0.92575 0.93524 0.93618 1.15900 0.84372 1.06019 1.02089 1.20960 0.93092 0.95134 0.95745 1.20398 0.93132 1.03045 1.00928 1.19369 0.83044 0.92447 0.93003 1.86093 1.15633 1.65866 1.54158 1.22984 0.93932 0.94502 0.90317 1.21483 0.89947 1.02031 1.01579 1.22083 0.90091 0.99491 0.96158 1.64727 1.02664 1.04426 1.51975 1.23376 0.98381 0.90794 0.97216 1.23005 0.91368 0.99757 1.01477 1.19363 0.90987 0.90633 0.78822 1.86085 1.48131 1.83781 1.22509 1.21693 0.90694 1.11260 1.33031 0.91982 1.25013 0.99177 0.94673 0.94491 1.69653 1.22830 1.22850 1.38641 0.86464 0.81775 0.79660 0.79343 1.20573 1.21144 1.19754 1.22843 0.95113 0.95291 0.93938 1.21272 0.94754 1.04950 1.02281 1.20960 0.93394 0.94759 0.95503 0.84345 0.83933 0.91609 0.91417 0.89828 0.90720 0.94812 0.91065 0.94868 0.91623 0.91348 0.91653 0.76609 0.92367 0.94607 0.90237 0.84174 0.84724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -4.82 18.54 41.84 0.78 -4.05 16 2 C 0.26 2.29 15.33 -22.47 -0.34 1.95 16 3 C -0.08 -0.55 5.74 -106.84 -0.61 -1.16 16 4 C -0.03 -0.17 9.75 -39.20 -0.38 -0.55 16 5 C -0.16 -1.05 9.97 -39.50 -0.39 -1.44 16 6 C 0.17 1.36 6.69 -39.04 -0.26 1.10 16 7 O -0.31 -2.91 10.13 -18.98 -0.19 -3.10 16 8 C 0.06 0.50 4.73 37.16 0.18 0.67 16 9 C -0.11 -1.25 5.68 -26.73 -0.15 -1.40 16 10 C 0.05 0.69 4.71 -3.82 -0.02 0.67 16 11 N -0.51 -9.22 5.25 -230.35 -1.21 -10.43 16 12 C 0.03 0.55 5.91 -1.81 -0.01 0.54 16 13 C -0.12 -2.64 5.42 -24.78 -0.13 -2.77 16 14 C 0.24 5.86 0.99 -90.42 -0.09 5.77 16 15 O -0.60 -15.17 12.92 -35.23 -0.46 -15.62 16 16 C -0.53 -13.94 8.11 -34.44 -0.28 -14.22 16 17 H 0.06 1.63 7.34 -52.49 -0.39 1.25 16 18 C 0.07 1.78 5.26 -17.82 -0.09 1.68 16 19 N -0.90 -23.65 10.88 55.43 0.60 -23.04 16 20 Si 0.90 20.44 29.54 -169.99 -5.02 15.42 16 21 H -0.28 -6.36 7.11 56.52 0.40 -5.95 16 22 H -0.29 -6.45 7.11 56.52 0.40 -6.05 16 23 H -0.27 -6.17 7.11 56.52 0.40 -5.77 16 24 C 0.06 1.16 6.13 -2.76 -0.02 1.14 16 25 C -0.21 -1.44 9.01 -39.50 -0.36 -1.80 16 26 C -0.03 -0.16 9.75 -39.20 -0.38 -0.54 16 27 H 0.14 0.54 8.06 -52.48 -0.42 0.12 16 28 H 0.14 0.79 8.06 -52.49 -0.42 0.37 16 29 H 0.07 0.50 7.64 -51.93 -0.40 0.10 16 30 H 0.07 0.49 7.66 -51.93 -0.40 0.10 16 31 H 0.08 0.99 8.14 -51.93 -0.42 0.56 16 32 H 0.07 0.88 7.36 -51.93 -0.38 0.50 16 33 H 0.03 0.45 7.83 -51.93 -0.41 0.05 16 34 H 0.07 0.88 8.08 -51.93 -0.42 0.46 16 35 H 0.03 0.60 7.81 -51.93 -0.41 0.19 16 36 H 0.07 1.09 7.79 -51.93 -0.40 0.69 16 37 H 0.07 1.64 7.86 -51.93 -0.41 1.23 16 38 H 0.06 1.53 8.02 -51.93 -0.42 1.11 16 39 H 0.38 9.92 7.18 45.56 0.33 10.25 16 40 H 0.27 6.72 8.31 -40.82 -0.34 6.38 16 41 H 0.04 0.73 7.59 -51.93 -0.39 0.34 16 42 H 0.08 1.67 7.39 -51.93 -0.38 1.29 16 43 H 0.14 0.76 6.27 -52.49 -0.33 0.43 16 44 H 0.13 0.61 8.06 -52.49 -0.42 0.18 16 LS Contribution 368.21 15.07 5.55 5.55 Total: -1.00 -28.89 368.21 -8.93 -37.82 By element: Atomic # 1 Polarization: 13.46 SS G_CDS: -5.63 Total: 7.83 kcal Atomic # 6 Polarization: -7.03 SS G_CDS: -3.35 Total: -10.38 kcal Atomic # 7 Polarization: -37.69 SS G_CDS: 0.17 Total: -37.52 kcal Atomic # 8 Polarization: -18.07 SS G_CDS: -0.65 Total: -18.72 kcal Atomic # 14 Polarization: 20.44 SS G_CDS: -5.02 Total: 15.42 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -28.89 -8.93 -37.82 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000829974418.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 4.732 kcal (2) G-P(sol) polarization free energy of solvation -28.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.156 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.930 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.818 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.086 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds