Wall clock time and date at job start Tue Mar 31 2020 11:18:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53003 * 109.47196 * 2 1 4 4 N 1.46494 * 109.46977 * 180.02562 * 3 2 1 5 5 C 1.46768 * 124.34533 * 90.00131 * 4 3 2 6 6 C 1.54484 * 105.47249 * 163.00139 * 5 4 3 7 7 H 1.08994 * 110.97202 * 267.26297 * 6 5 4 8 8 C 1.50695 * 110.96836 * 143.53541 * 6 5 4 9 9 O 1.21283 * 120.00344 * 3.09056 * 8 6 5 10 10 N 1.34777 * 120.00094 * 183.09503 * 8 6 5 11 11 C 1.39236 * 120.00221 * 175.47667 * 10 8 6 12 12 C 1.39485 * 119.83506 * 216.01082 * 11 10 8 13 13 C 1.36367 * 120.17109 * 180.02562 * 12 11 10 14 14 C 1.40873 * 119.82930 * 0.02562 * 13 12 11 15 15 C 1.41146 * 120.16631 * 179.97438 * 14 13 12 16 16 H 1.08003 * 119.99675 * 24.80893 * 15 14 13 17 17 C 1.39904 * 120.00278 * 205.07922 * 15 14 13 18 18 N 1.30869 * 119.99552 * 15.30884 * 17 15 14 19 19 Si 1.86796 * 120.00234 * 195.30056 * 17 15 14 20 20 H 1.48497 * 109.47134 * 60.00379 * 19 17 15 21 21 H 1.48500 * 109.47098 * 180.02562 * 19 17 15 22 22 H 1.48500 * 109.47374 * 300.00375 * 19 17 15 23 23 C 1.40868 * 119.67097 * 0.25355 * 14 13 12 24 24 C 1.36378 * 119.82475 * 359.46660 * 23 14 13 25 25 C 1.54634 * 101.79416 * 25.39972 * 6 5 4 26 26 C 1.34411 * 124.35518 * 270.02299 * 4 3 2 27 27 O 1.21286 * 124.94058 * 0.40262 * 26 4 3 28 28 H 1.09006 * 109.47023 * 180.02562 * 1 2 3 29 29 H 1.09002 * 109.47040 * 299.99415 * 1 2 3 30 30 H 1.08991 * 109.47612 * 59.99622 * 1 2 3 31 31 H 1.08997 * 109.46508 * 240.00092 * 2 1 3 32 32 H 1.09000 * 109.47397 * 120.00583 * 2 1 3 33 33 H 1.09002 * 109.46648 * 60.00346 * 3 2 1 34 34 H 1.08995 * 109.46769 * 300.00321 * 3 2 1 35 35 H 1.09000 * 110.24642 * 44.00458 * 5 4 3 36 36 H 1.08995 * 110.32382 * 282.04321 * 5 4 3 37 37 H 0.97009 * 119.99735 * 355.47018 * 10 8 6 38 38 H 1.07998 * 119.91037 * 0.02562 * 12 11 10 39 39 H 1.08007 * 120.08595 * 180.02562 * 13 12 11 40 40 H 0.97008 * 119.99913 * 179.97438 * 18 17 15 41 41 H 1.07999 * 120.08656 * 179.74254 * 23 14 13 42 42 H 1.08002 * 119.91374 * 180.29003 * 24 23 14 43 43 H 1.08995 * 110.48828 * 93.90138 * 25 6 5 44 44 H 1.09006 * 110.48249 * 216.53853 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 7 3.5050 1.4425 -0.0006 5 6 4.3325 1.4426 -1.2128 6 6 5.7408 1.8778 -0.7503 7 1 5.8672 2.9561 -0.8466 8 6 6.8108 1.1418 -1.5147 9 8 6.5031 0.3738 -2.4016 10 7 8.1097 1.3368 -1.2127 11 6 9.0934 0.5880 -1.8533 12 6 10.2294 0.1880 -1.1497 13 6 11.1974 -0.5450 -1.7705 14 6 11.0480 -0.8977 -3.1261 15 6 12.0457 -1.6558 -3.7758 16 1 12.6980 -2.2959 -3.2003 17 6 12.1934 -1.5738 -5.1646 18 7 11.6303 -0.5947 -5.8257 19 14 13.1943 -2.8615 -6.0752 20 1 12.5927 -4.2014 -5.8571 21 1 13.1975 -2.5502 -7.5272 22 1 14.5890 -2.8561 -5.5652 23 6 9.9007 -0.4851 -3.8317 24 6 8.9386 0.2428 -3.1958 25 6 5.7307 1.4523 0.7363 26 6 4.2639 1.4418 1.1087 27 8 3.8356 1.4342 2.2434 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5138 0.8901 30 1 -0.3634 0.5138 -0.8898 31 1 1.8932 -0.5138 -0.8900 32 1 1.8934 -0.5139 0.8899 33 1 1.6767 1.9563 0.8901 34 1 1.6766 1.9563 -0.8899 35 1 3.9377 2.1532 -1.9389 36 1 4.3698 0.4431 -1.6458 37 1 8.3593 1.9989 -0.5491 38 1 10.3426 0.4596 -0.1106 39 1 12.0762 -0.8544 -1.2242 40 1 11.7330 -0.5375 -6.7887 41 1 9.7814 -0.7482 -4.8723 42 1 8.0562 0.5559 -3.7341 43 1 6.1605 0.4573 0.8513 44 1 6.2741 2.1761 1.3439 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000411274376.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:18:45 Heat of formation + Delta-G solvation = -56.484422 kcal Electronic energy + Delta-G solvation = -25490.178803 eV Core-core repulsion = 21792.695302 eV Total energy + Delta-G solvation = -3697.483501 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -40.94524 -39.42995 -37.40736 -36.46681 -34.98953 -34.55252 -33.05251 -31.68889 -29.54531 -29.03912 -27.85057 -26.66876 -25.12622 -23.23849 -22.03084 -21.40362 -20.87009 -19.62845 -19.47912 -17.55675 -17.36459 -17.00345 -16.42195 -15.97913 -15.48224 -15.22204 -14.96856 -14.64615 -14.06511 -14.03890 -13.79383 -13.69764 -13.42797 -13.10353 -12.88072 -12.63611 -12.43337 -12.13447 -12.02653 -11.84072 -11.79929 -11.63452 -11.47449 -11.35011 -11.14172 -11.12049 -10.98501 -10.72620 -10.14130 -9.93140 -9.72579 -9.45690 -9.10840 -8.98182 -8.85510 -7.56670 -7.06573 -6.76834 -4.35491 2.39981 2.47565 2.73959 2.92771 3.04376 3.06715 3.08033 3.25072 3.54662 3.89953 4.09416 4.21978 4.57770 4.64331 4.68360 4.70199 4.78580 4.97500 5.13452 5.13842 5.27130 5.32578 5.38489 5.48929 5.56622 5.67043 5.72816 5.78216 5.81839 5.96471 6.10645 6.32893 6.35493 6.73044 6.88738 6.93961 7.00141 7.11095 7.24018 7.55340 7.61555 7.90749 7.97599 8.01301 8.13388 8.25908 8.58293 8.65409 8.84283 8.95285 10.14264 Molecular weight = 316.16amu Principal moments of inertia in cm(-1) A = 0.024481 B = 0.002451 C = 0.002329 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1143.473383 B =11419.305582 C =12021.564106 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.144 4.144 3 C 0.127 3.873 4 N -0.619 5.619 5 C 0.117 3.883 6 C -0.122 4.122 7 H 0.115 0.885 8 C 0.509 3.491 9 O -0.525 6.525 10 N -0.644 5.644 11 C -0.014 4.014 12 C -0.102 4.102 13 C -0.216 4.216 14 C 0.106 3.894 15 C -0.456 4.456 16 H 0.078 0.922 17 C 0.073 3.927 18 N -0.791 5.791 19 Si 0.911 3.089 20 H -0.263 1.263 21 H -0.278 1.278 22 H -0.265 1.265 23 C -0.158 4.158 24 C -0.084 4.084 25 C -0.145 4.145 26 C 0.521 3.479 27 O -0.534 6.534 28 H 0.057 0.943 29 H 0.055 0.945 30 H 0.056 0.944 31 H 0.067 0.933 32 H 0.066 0.934 33 H 0.081 0.919 34 H 0.079 0.921 35 H 0.084 0.916 36 H 0.094 0.906 37 H 0.395 0.605 38 H 0.090 0.910 39 H 0.096 0.904 40 H 0.282 0.718 41 H 0.123 0.877 42 H 0.106 0.894 43 H 0.111 0.889 44 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.317 6.016 7.034 17.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C -0.183 4.183 3 C 0.005 3.995 4 N -0.353 5.353 5 C -0.006 4.006 6 C -0.144 4.144 7 H 0.133 0.867 8 C 0.294 3.706 9 O -0.402 6.402 10 N -0.286 5.286 11 C -0.106 4.106 12 C -0.122 4.122 13 C -0.236 4.236 14 C 0.103 3.897 15 C -0.485 4.485 16 H 0.096 0.904 17 C -0.145 4.145 18 N -0.416 5.416 19 Si 0.735 3.265 20 H -0.188 1.188 21 H -0.203 1.203 22 H -0.190 1.190 23 C -0.178 4.178 24 C -0.104 4.104 25 C -0.185 4.185 26 C 0.309 3.691 27 O -0.411 6.411 28 H 0.077 0.923 29 H 0.074 0.926 30 H 0.075 0.925 31 H 0.086 0.914 32 H 0.085 0.915 33 H 0.100 0.900 34 H 0.098 0.902 35 H 0.102 0.898 36 H 0.112 0.888 37 H 0.229 0.771 38 H 0.108 0.892 39 H 0.114 0.886 40 H 0.093 0.907 41 H 0.141 0.859 42 H 0.124 0.876 43 H 0.129 0.871 44 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -14.875 5.569 6.753 17.259 hybrid contribution 0.692 -0.127 -0.220 0.737 sum -14.183 5.442 6.533 16.536 Atomic orbital electron populations 1.21687 0.94973 1.02111 1.01871 1.21934 0.96261 0.97094 1.02984 1.21448 0.77665 0.97244 1.03117 1.48350 1.06320 1.73257 1.07367 1.22004 0.87840 1.04103 0.86654 1.22224 0.94789 1.02253 0.95154 0.86716 1.19945 0.83264 0.82913 0.84437 1.90713 1.81695 1.36870 1.30882 1.42891 1.04902 1.38958 1.41828 1.17157 0.92331 1.08443 0.92635 1.20043 0.94908 1.00297 0.96918 1.20551 0.99631 1.06669 0.96787 1.17691 0.91559 0.89513 0.90956 1.19547 1.14528 1.22666 0.91755 0.90414 1.25941 0.95255 0.95152 0.98141 1.69823 1.35762 1.26297 1.09760 0.86324 0.80462 0.81556 0.78140 1.18788 1.20303 1.18997 1.21072 0.93223 1.02764 1.00714 1.20525 0.98458 0.99408 0.92041 1.22362 0.95318 1.05653 0.95180 1.20806 0.89000 0.74966 0.84369 1.90721 1.78640 1.50644 1.21064 0.92342 0.92555 0.92528 0.91409 0.91532 0.90026 0.90237 0.89760 0.88800 0.77114 0.89156 0.88623 0.90735 0.85911 0.87646 0.87084 0.87198 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -1.02 9.91 37.16 0.37 -0.66 16 2 C -0.14 -1.27 6.26 -26.73 -0.17 -1.44 16 3 C 0.13 1.12 5.93 -4.04 -0.02 1.10 16 4 N -0.62 -6.55 2.93 -172.39 -0.51 -7.06 16 5 C 0.12 1.20 6.69 -3.12 -0.02 1.18 16 6 C -0.12 -1.26 3.54 -90.14 -0.32 -1.58 16 7 H 0.11 0.89 8.14 -51.93 -0.42 0.47 16 8 C 0.51 7.72 6.89 -10.99 -0.08 7.64 16 9 O -0.53 -10.17 12.99 5.55 0.07 -10.09 16 10 N -0.64 -10.15 5.29 -9.74 -0.05 -10.20 16 11 C -0.01 -0.29 6.29 -83.57 -0.53 -0.81 16 12 C -0.10 -2.13 9.90 -39.79 -0.39 -2.53 16 13 C -0.22 -5.10 9.74 -39.26 -0.38 -5.48 16 14 C 0.11 2.76 5.58 -106.80 -0.60 2.17 16 15 C -0.46 -11.85 9.05 -37.86 -0.34 -12.19 16 16 H 0.08 1.93 7.89 -52.48 -0.41 1.51 16 17 C 0.07 1.80 5.19 -17.34 -0.09 1.71 16 18 N -0.79 -20.16 10.82 55.55 0.60 -19.56 16 19 Si 0.91 18.40 29.59 -169.99 -5.03 13.37 16 20 H -0.26 -5.31 7.11 56.52 0.40 -4.90 16 21 H -0.28 -5.47 7.11 56.52 0.40 -5.07 16 22 H -0.27 -5.27 7.11 56.52 0.40 -4.87 16 23 C -0.16 -4.11 8.63 -39.26 -0.34 -4.45 16 24 C -0.08 -2.01 8.61 -39.79 -0.34 -2.35 16 25 C -0.14 -1.48 6.40 -26.71 -0.17 -1.65 16 26 C 0.52 6.50 8.02 -10.84 -0.09 6.41 16 27 O -0.53 -8.47 17.60 5.55 0.10 -8.38 16 28 H 0.06 0.39 8.14 -51.93 -0.42 -0.03 16 29 H 0.06 0.37 8.14 -51.93 -0.42 -0.05 16 30 H 0.06 0.33 8.14 -51.93 -0.42 -0.09 16 31 H 0.07 0.62 8.14 -51.93 -0.42 0.19 16 32 H 0.07 0.70 8.14 -51.93 -0.42 0.28 16 33 H 0.08 0.76 7.93 -51.93 -0.41 0.35 16 34 H 0.08 0.54 8.14 -51.93 -0.42 0.12 16 35 H 0.08 0.71 8.14 -51.93 -0.42 0.28 16 36 H 0.09 1.15 7.00 -51.93 -0.36 0.78 16 37 H 0.40 4.74 8.82 -40.82 -0.36 4.38 16 38 H 0.09 1.59 8.06 -52.49 -0.42 1.17 16 39 H 0.10 2.11 8.06 -52.48 -0.42 1.68 16 40 H 0.28 6.55 8.30 -40.82 -0.34 6.21 16 41 H 0.12 3.33 6.07 -52.49 -0.32 3.01 16 42 H 0.11 2.50 6.27 -52.49 -0.33 2.17 16 43 H 0.11 1.24 7.89 -51.93 -0.41 0.83 16 44 H 0.11 0.89 8.14 -51.93 -0.42 0.47 16 LS Contribution 366.75 15.07 5.53 5.53 Total: -1.00 -31.24 366.75 -9.19 -40.43 By element: Atomic # 1 Polarization: 15.28 SS G_CDS: -6.39 Total: 8.89 kcal Atomic # 6 Polarization: -9.42 SS G_CDS: -3.51 Total: -12.93 kcal Atomic # 7 Polarization: -36.86 SS G_CDS: 0.04 Total: -36.81 kcal Atomic # 8 Polarization: -18.64 SS G_CDS: 0.17 Total: -18.47 kcal Atomic # 14 Polarization: 18.40 SS G_CDS: -5.03 Total: 13.37 kcal Total LS contribution 5.53 Total: 5.53 kcal Total: -31.24 -9.19 -40.43 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000411274376.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.052 kcal (2) G-P(sol) polarization free energy of solvation -31.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.294 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.190 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.432 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.484 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds