Wall clock time and date at job start Tue Mar 31 2020 11:04:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52991 * 1 3 3 C 1.53004 * 109.47332 * 2 1 4 4 H 1.08992 * 109.47482 * 305.00525 * 3 2 1 5 5 C 1.50697 * 109.47437 * 184.99885 * 3 2 1 6 6 H 1.08000 * 120.00467 * 240.00582 * 5 3 2 7 7 C 1.37880 * 120.00042 * 59.99909 * 5 3 2 8 8 N 1.31507 * 120.00408 * 179.97438 * 7 5 3 9 9 Si 1.86801 * 119.99764 * 0.02562 * 7 5 3 10 10 H 1.48502 * 109.46972 * 269.99817 * 9 7 5 11 11 H 1.48504 * 109.47353 * 149.99506 * 9 7 5 12 12 H 1.48498 * 109.47126 * 29.99614 * 9 7 5 13 13 N 1.46500 * 109.46792 * 65.00039 * 3 2 1 14 14 C 1.34779 * 120.00192 * 274.99916 * 13 3 2 15 15 O 1.21279 * 119.99929 * 0.02562 * 14 13 3 16 16 C 1.50696 * 120.00154 * 179.97438 * 14 13 3 17 17 H 1.09000 * 110.85946 * 303.79376 * 16 14 13 18 18 C 1.54630 * 110.96748 * 67.62290 * 16 14 13 19 19 C 1.51287 * 104.19495 * 93.32233 * 18 16 14 20 20 O 1.21288 * 124.94030 * 196.25276 * 19 18 16 21 21 N 1.34417 * 110.11592 * 16.25102 * 19 18 16 22 22 C 1.39923 * 124.34998 * 180.38880 * 21 19 18 23 23 C 1.38868 * 120.06960 * 354.02698 * 22 21 19 24 24 C 1.38116 * 119.92732 * 179.72183 * 23 22 21 25 25 C 1.38279 * 120.06986 * 0.57614 * 24 23 22 26 26 C 1.38280 * 120.14461 * 359.67376 * 25 24 23 27 27 C 1.38123 * 120.06588 * 0.04580 * 26 25 24 28 28 C 1.46768 * 111.29855 * 0.40765 * 21 19 18 29 29 H 1.09004 * 109.47080 * 300.00059 * 1 2 3 30 30 H 1.09001 * 109.47321 * 59.99507 * 1 2 3 31 31 H 1.08996 * 109.47506 * 179.97438 * 1 2 3 32 32 H 1.09002 * 109.47205 * 240.00466 * 2 1 3 33 33 H 1.08995 * 109.47511 * 120.00085 * 2 1 3 34 34 H 0.96994 * 120.00777 * 180.02562 * 8 7 5 35 35 H 0.97008 * 120.00255 * 94.99762 * 13 3 2 36 36 H 1.08998 * 110.48896 * 211.99397 * 18 16 14 37 37 H 1.09000 * 110.49216 * 334.64344 * 18 16 14 38 38 H 1.08001 * 120.03606 * 359.97438 * 23 22 21 39 39 H 1.08007 * 119.96563 * 180.25111 * 24 23 22 40 40 H 1.08005 * 119.93108 * 179.70714 * 25 24 23 41 41 H 1.07998 * 119.97212 * 180.02562 * 26 25 24 42 42 H 1.07995 * 120.03027 * 179.97438 * 27 26 25 43 43 H 1.09005 * 110.24488 * 223.98043 * 28 21 19 44 44 H 1.08999 * 110.24344 * 101.98801 * 28 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 1 1.6054 1.9816 -0.8417 5 6 3.5419 1.4443 -0.1238 6 1 4.1472 1.8888 0.6523 7 6 4.1433 0.8784 -1.2279 8 7 5.4539 0.8804 -1.3363 9 14 3.0963 0.1101 -2.5707 10 1 2.8744 -1.3260 -2.2645 11 1 3.7940 0.2361 -3.8755 12 1 1.7881 0.8094 -2.6394 13 7 1.6524 2.0974 1.2518 14 6 0.4351 2.6644 1.3670 15 8 -0.3396 2.6320 0.4345 16 6 0.0362 3.3376 2.6549 17 1 0.1237 2.6495 3.4958 18 6 0.8744 4.6147 2.8944 19 6 0.0355 5.7256 2.3021 20 8 0.4433 6.8353 2.0315 21 7 -1.2277 5.3038 2.1195 22 6 -2.2524 6.0898 1.5808 23 6 -2.0295 7.4334 1.3100 24 6 -3.0413 8.2051 0.7730 25 6 -4.2787 7.6440 0.5160 26 6 -4.5055 6.3076 0.7894 27 6 -3.4960 5.5291 1.3211 28 6 -1.3940 3.9131 2.5580 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3634 -1.0276 -0.0005 32 1 1.8933 -0.5138 -0.8900 33 1 1.8933 -0.5138 0.8899 34 1 5.8770 0.4827 -2.1132 35 1 2.2719 2.1230 1.9979 36 1 1.0248 4.7778 3.9616 37 1 1.8326 4.5444 2.3796 38 1 -1.0649 7.8735 1.5153 39 1 -2.8674 9.2493 0.5583 40 1 -5.0698 8.2507 0.1005 41 1 -5.4728 5.8721 0.5873 42 1 -3.6738 4.4855 1.5347 43 1 -1.9769 3.3539 1.8260 44 1 -1.8806 3.8807 3.5328 RHF calculation, no. of doubly occupied orbitals= 59 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000546570590.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:04:56 Heat of formation + Delta-G solvation = -34.248629 kcal Electronic energy + Delta-G solvation = -26751.177556 eV Core-core repulsion = 23054.658271 eV Total energy + Delta-G solvation = -3696.519285 eV No. of doubly occupied orbitals = 59 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.39607 -39.38072 -38.46318 -36.59907 -35.32030 -33.48692 -32.37744 -31.48969 -30.99061 -29.19716 -27.93693 -27.56305 -24.22326 -23.13559 -22.69912 -22.01383 -20.44659 -19.89510 -19.63522 -17.90888 -17.79190 -16.53287 -16.48746 -15.81048 -15.59158 -15.49914 -15.07318 -14.68487 -14.43713 -14.07393 -13.82700 -13.59725 -13.52617 -13.41468 -13.10450 -12.91475 -12.68471 -12.27738 -12.05025 -11.92430 -11.81882 -11.75839 -11.54793 -11.23328 -11.14149 -10.95765 -10.69359 -10.34626 -9.98820 -9.71501 -9.64050 -9.31215 -9.23771 -9.01322 -8.80850 -8.18952 -7.98552 -6.25640 -4.28801 1.19461 1.34006 2.47261 2.70469 2.96934 3.19285 3.32390 3.36357 3.64297 3.79741 4.03977 4.18769 4.27117 4.60248 4.82230 4.88015 4.91813 5.07813 5.08922 5.18736 5.23687 5.33501 5.39078 5.47200 5.53727 5.59190 5.63030 5.88184 5.94851 5.95522 6.09715 6.13618 6.31293 6.46449 6.49957 6.56940 6.62364 6.75767 6.86236 6.97447 7.01444 7.16037 7.21200 7.43840 7.93293 8.04700 8.42151 8.67972 8.79743 9.34589 10.86326 Molecular weight = 316.16amu Principal moments of inertia in cm(-1) A = 0.017972 B = 0.003519 C = 0.003410 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1557.567876 B = 7954.885887 C = 8210.255934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C -0.139 4.139 3 C 0.243 3.757 4 H 0.049 0.951 5 C -0.537 4.537 6 H 0.081 0.919 7 C 0.080 3.920 8 N -0.890 5.890 9 Si 0.882 3.118 10 H -0.275 1.275 11 H -0.294 1.294 12 H -0.261 1.261 13 N -0.695 5.695 14 C 0.506 3.494 15 O -0.540 6.540 16 C -0.127 4.127 17 H 0.127 0.873 18 C -0.144 4.144 19 C 0.520 3.480 20 O -0.509 6.509 21 N -0.553 5.553 22 C 0.174 3.826 23 C -0.160 4.160 24 C -0.093 4.093 25 C -0.151 4.151 26 C -0.094 4.094 27 C -0.155 4.155 28 C 0.111 3.889 29 H 0.051 0.949 30 H 0.052 0.948 31 H 0.032 0.968 32 H 0.055 0.945 33 H 0.059 0.941 34 H 0.268 0.732 35 H 0.396 0.604 36 H 0.119 0.881 37 H 0.118 0.882 38 H 0.154 0.846 39 H 0.124 0.876 40 H 0.120 0.880 41 H 0.124 0.876 42 H 0.126 0.874 43 H 0.105 0.895 44 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -16.823 6.690 10.804 21.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.177 4.177 3 C 0.140 3.860 4 H 0.067 0.933 5 C -0.575 4.575 6 H 0.099 0.901 7 C -0.124 4.124 8 N -0.527 5.527 9 Si 0.712 3.288 10 H -0.202 1.202 11 H -0.221 1.221 12 H -0.185 1.185 13 N -0.342 5.342 14 C 0.290 3.710 15 O -0.418 6.418 16 C -0.149 4.149 17 H 0.145 0.855 18 C -0.184 4.184 19 C 0.310 3.690 20 O -0.385 6.385 21 N -0.276 5.276 22 C 0.080 3.920 23 C -0.180 4.180 24 C -0.112 4.112 25 C -0.170 4.170 26 C -0.113 4.113 27 C -0.176 4.176 28 C -0.012 4.012 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.051 0.949 32 H 0.073 0.927 33 H 0.078 0.922 34 H 0.078 0.922 35 H 0.230 0.770 36 H 0.137 0.863 37 H 0.136 0.864 38 H 0.171 0.829 39 H 0.142 0.858 40 H 0.138 0.862 41 H 0.142 0.858 42 H 0.144 0.856 43 H 0.123 0.877 44 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges -16.935 7.176 9.865 20.871 hybrid contribution -0.061 -0.701 -0.443 0.831 sum -16.996 6.475 9.422 20.483 Atomic orbital electron populations 1.21870 0.96962 0.99069 1.02150 1.22286 0.94322 0.99894 1.01227 1.19173 0.95742 0.88495 0.82628 0.93341 1.21026 0.88512 1.40021 1.07972 0.90130 1.24827 0.94856 0.95119 0.97632 1.69854 1.08690 1.44307 1.29820 0.86915 0.80968 0.79902 0.81021 1.20203 1.22102 1.18533 1.46134 1.14552 1.55409 1.18131 1.19981 0.83047 0.79385 0.88562 1.90698 1.51450 1.59660 1.39980 1.22386 0.95319 0.97674 0.99513 0.85539 1.22391 1.00181 0.91638 1.04234 1.21001 0.82036 0.88709 0.77283 1.90622 1.75025 1.21980 1.50835 1.45731 1.09150 1.13818 1.58884 1.17788 0.87675 0.90441 0.96062 1.21649 1.02028 0.92221 1.02082 1.21037 0.92756 0.99705 0.97690 1.21092 0.97478 0.95518 1.02956 1.20913 0.98498 0.93892 0.97958 1.20808 0.92255 1.00304 1.04228 1.22169 0.97055 0.80446 1.01504 0.93015 0.92909 0.94925 0.92723 0.92207 0.92213 0.77044 0.86284 0.86423 0.82895 0.85808 0.86200 0.85788 0.85606 0.87662 0.89584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -2.68 8.51 37.15 0.32 -2.36 16 2 C -0.14 -2.91 5.11 -26.73 -0.14 -3.05 16 3 C 0.24 5.45 1.83 -69.08 -0.13 5.33 16 4 H 0.05 1.24 6.63 -51.93 -0.34 0.89 16 5 C -0.54 -14.02 9.31 -34.44 -0.32 -14.34 16 6 H 0.08 2.20 7.98 -52.49 -0.42 1.79 16 7 C 0.08 2.19 5.45 -17.82 -0.10 2.10 16 8 N -0.89 -25.98 13.96 55.43 0.77 -25.21 16 9 Si 0.88 21.42 24.41 -169.99 -4.15 17.27 16 10 H -0.28 -6.44 6.83 56.52 0.39 -6.05 16 11 H -0.29 -7.17 7.11 56.52 0.40 -6.76 16 12 H -0.26 -6.30 6.53 56.52 0.37 -5.93 16 13 N -0.69 -12.27 4.95 -54.94 -0.27 -12.54 16 14 C 0.51 8.18 5.65 -10.99 -0.06 8.12 16 15 O -0.54 -10.63 12.67 5.56 0.07 -10.56 16 16 C -0.13 -1.36 3.54 -90.14 -0.32 -1.68 16 17 H 0.13 0.88 8.14 -51.93 -0.42 0.46 16 18 C -0.14 -1.58 6.40 -26.74 -0.17 -1.75 16 19 C 0.52 7.63 7.92 -10.86 -0.09 7.55 16 20 O -0.51 -8.99 14.82 5.55 0.08 -8.90 16 21 N -0.55 -7.47 3.14 -112.27 -0.35 -7.82 16 22 C 0.17 2.44 6.60 -83.70 -0.55 1.88 16 23 C -0.16 -2.27 9.29 -39.39 -0.37 -2.63 16 24 C -0.09 -1.09 10.04 -39.61 -0.40 -1.49 16 25 C -0.15 -1.59 10.04 -39.55 -0.40 -1.99 16 26 C -0.09 -0.99 10.04 -39.61 -0.40 -1.39 16 27 C -0.16 -1.86 9.42 -39.39 -0.37 -2.24 16 28 C 0.11 1.17 5.84 -3.12 -0.02 1.16 16 29 H 0.05 0.91 5.64 -51.93 -0.29 0.61 16 30 H 0.05 1.07 7.85 -51.93 -0.41 0.66 16 31 H 0.03 0.53 8.14 -51.93 -0.42 0.11 16 32 H 0.05 1.23 3.22 -51.93 -0.17 1.06 16 33 H 0.06 1.18 8.14 -51.93 -0.42 0.76 16 34 H 0.27 7.37 8.31 -40.82 -0.34 7.03 16 35 H 0.40 6.00 8.54 -40.82 -0.35 5.65 16 36 H 0.12 0.89 8.14 -51.93 -0.42 0.46 16 37 H 0.12 1.44 7.84 -51.93 -0.41 1.03 16 38 H 0.15 2.40 5.26 -52.49 -0.28 2.12 16 39 H 0.12 1.18 8.06 -52.48 -0.42 0.75 16 40 H 0.12 0.95 8.06 -52.48 -0.42 0.53 16 41 H 0.12 0.99 8.06 -52.49 -0.42 0.57 16 42 H 0.13 1.31 6.75 -52.49 -0.35 0.95 16 43 H 0.11 1.25 6.11 -51.93 -0.32 0.93 16 44 H 0.09 0.63 8.14 -51.93 -0.42 0.20 16 LS Contribution 348.41 15.07 5.25 5.25 Total: -1.00 -33.47 348.41 -8.00 -41.47 By element: Atomic # 1 Polarization: 13.73 SS G_CDS: -5.90 Total: 7.83 kcal Atomic # 6 Polarization: -3.28 SS G_CDS: -3.50 Total: -6.79 kcal Atomic # 7 Polarization: -45.72 SS G_CDS: 0.15 Total: -45.57 kcal Atomic # 8 Polarization: -19.62 SS G_CDS: 0.15 Total: -19.47 kcal Atomic # 14 Polarization: 21.42 SS G_CDS: -4.15 Total: 17.27 kcal Total LS contribution 5.25 Total: 5.25 kcal Total: -33.47 -8.00 -41.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000546570590.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 7.224 kcal (2) G-P(sol) polarization free energy of solvation -33.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.000 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.472 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.249 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds