Wall clock time and date at job start Tue Mar 31 2020 11:48:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34226 * 117.00583 * 2 1 4 4 O 1.20830 * 119.99685 * 359.97438 * 3 2 1 5 5 C 1.50694 * 120.00372 * 180.02562 * 3 2 1 6 6 F 1.39894 * 110.63297 * 56.89326 * 5 3 2 7 7 C 1.55144 * 110.85464 * 293.68091 * 5 3 2 8 8 C 1.54906 * 101.65346 * 205.89356 * 7 5 3 9 9 N 1.47846 * 104.79456 * 37.07394 * 8 7 5 10 10 C 1.46903 * 110.99657 * 213.63412 * 9 8 7 11 11 H 1.08993 * 109.47221 * 67.86800 * 10 9 8 12 12 C 1.53006 * 109.47065 * 307.86608 * 10 9 8 13 13 C 1.50696 * 109.46745 * 187.87162 * 10 9 8 14 14 O 1.21277 * 120.00465 * 359.97438 * 13 10 9 15 15 N 1.34779 * 120.00038 * 180.02562 * 13 10 9 16 16 C 1.46508 * 119.99761 * 359.97438 * 15 13 10 17 17 C 1.46496 * 120.00363 * 179.97438 * 15 13 10 18 18 C 1.50703 * 109.47085 * 269.99593 * 17 15 13 19 19 H 1.07998 * 119.99715 * 0.02562 * 18 17 15 20 20 C 1.37873 * 120.00086 * 179.97438 * 18 17 15 21 21 N 1.31513 * 120.00024 * 0.02562 * 20 18 17 22 22 Si 1.86797 * 120.00033 * 180.27786 * 20 18 17 23 23 H 1.48495 * 109.47132 * 269.72221 * 22 20 18 24 24 H 1.48498 * 109.47452 * 29.72635 * 22 20 18 25 25 H 1.48509 * 109.47310 * 149.72579 * 22 20 18 26 26 C 1.47438 * 108.56647 * 335.90159 * 9 8 7 27 27 H 1.08999 * 109.47060 * 59.99984 * 1 2 3 28 28 H 1.09000 * 109.47623 * 179.97438 * 1 2 3 29 29 H 1.08996 * 109.46942 * 300.00316 * 1 2 3 30 30 H 1.08997 * 110.99089 * 323.98752 * 7 5 3 31 31 H 1.09002 * 110.98673 * 87.80543 * 7 5 3 32 32 H 1.08998 * 110.37676 * 278.24234 * 8 7 5 33 33 H 1.09005 * 110.36677 * 155.90191 * 8 7 5 34 34 H 1.09000 * 109.46804 * 52.89760 * 12 10 9 35 35 H 1.08999 * 109.46897 * 172.89316 * 12 10 9 36 36 H 1.08995 * 109.47112 * 292.89421 * 12 10 9 37 37 H 1.09002 * 109.46914 * 270.00098 * 16 15 13 38 38 H 1.08998 * 109.47028 * 29.99598 * 16 15 13 39 39 H 1.08991 * 109.47243 * 150.00472 * 16 15 13 40 40 H 1.08997 * 109.47225 * 149.99488 * 17 15 13 41 41 H 1.09003 * 109.46997 * 29.99786 * 17 15 13 42 42 H 0.97002 * 120.00253 * 180.02562 * 21 20 18 43 43 H 1.08996 * 109.88797 * 120.39777 * 26 9 8 44 44 H 1.08998 * 109.88665 * 241.42411 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0615 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 9 4.0956 0.5866 -1.0976 7 6 4.1489 0.7218 1.3268 8 6 5.4980 1.4778 1.4153 9 7 5.2091 2.8287 0.8884 10 6 6.3715 3.3753 0.1756 11 1 6.5409 2.8027 -0.7362 12 6 7.6083 3.2847 1.0719 13 6 6.1117 4.8171 -0.1775 14 8 5.0615 5.3379 0.1335 15 7 7.0460 5.5277 -0.8398 16 6 8.3145 4.8985 -1.2160 17 6 6.7932 6.9291 -1.1836 18 6 6.1383 7.0037 -2.5388 19 1 5.9307 6.0977 -3.0888 20 6 5.8031 8.2284 -3.0761 21 7 6.0555 9.3316 -2.4062 22 14 4.9843 8.3203 -4.7525 23 1 6.0248 8.4279 -5.8064 24 1 4.1771 7.0942 -4.9771 25 1 4.0998 9.5120 -4.8067 26 6 4.0358 2.7448 -0.0005 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3633 0.5139 0.8899 30 1 3.5050 0.9720 2.1699 31 1 4.3080 -0.3548 1.2649 32 1 6.2509 0.9839 0.8011 33 1 5.8319 1.5380 2.4512 34 1 7.7233 2.2616 1.4299 35 1 8.4919 3.5716 0.5018 36 1 7.4906 3.9562 1.9223 37 1 9.0401 5.0361 -0.4144 38 1 8.1559 3.8332 -1.3836 39 1 8.6911 5.3580 -2.1298 40 1 7.7371 7.4737 -1.2058 41 1 6.1349 7.3733 -0.4369 42 1 5.8194 10.1932 -2.7840 43 1 3.2398 3.3881 0.3745 44 1 4.3129 3.0481 -1.0100 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000752086310.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:48 Heat of formation + Delta-G solvation = -137.961776 kcal Electronic energy + Delta-G solvation = -28033.953523 eV Core-core repulsion = 23902.167674 eV Total energy + Delta-G solvation = -4131.785849 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 316.163 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -48.19963 -40.79856 -39.76752 -37.89271 -36.76431 -34.80931 -33.51384 -32.40414 -29.71680 -29.52303 -27.94884 -27.32845 -26.05716 -24.19824 -23.54169 -22.50107 -20.91144 -20.53948 -18.53624 -18.41695 -17.40413 -17.00793 -16.57793 -16.34809 -16.17247 -15.56742 -15.42929 -14.89448 -14.82728 -14.51378 -14.17497 -13.77968 -13.51094 -13.32256 -13.22346 -13.01708 -12.77933 -12.50598 -12.23663 -12.21178 -12.13515 -11.96733 -11.78757 -11.60765 -11.34702 -11.19611 -11.18264 -11.11720 -11.05770 -10.84118 -10.54874 -10.53608 -10.12705 -9.59928 -8.87737 -8.41086 -8.27733 -7.60000 -6.01842 -4.06540 1.72544 2.16812 3.31728 3.38579 3.41831 3.47111 3.53510 3.76521 3.91486 4.08504 4.26665 4.47296 4.51518 4.76027 4.81055 4.90100 4.98072 5.00771 5.17206 5.21430 5.22144 5.32724 5.38132 5.39966 5.59554 5.61007 5.71380 5.73058 5.79982 5.92057 5.94725 6.09219 6.14744 6.29264 6.79313 6.80787 7.12443 7.31204 7.48077 7.57721 7.94867 8.26090 8.45010 8.93211 9.14891 9.58693 11.06172 Molecular weight = 316.16amu Principal moments of inertia in cm(-1) A = 0.013491 B = 0.004055 C = 0.003361 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2074.971011 B = 6902.649482 C = 8328.321775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.351 6.351 3 C 0.456 3.544 4 O -0.472 6.472 5 C 0.106 3.894 6 F -0.179 7.179 7 C -0.139 4.139 8 C 0.042 3.958 9 N -0.497 5.497 10 C 0.055 3.945 11 H 0.065 0.935 12 C -0.153 4.153 13 C 0.509 3.491 14 O -0.520 6.520 15 N -0.602 5.602 16 C 0.082 3.918 17 C 0.247 3.753 18 C -0.526 4.526 19 H 0.056 0.944 20 C 0.062 3.938 21 N -0.894 5.894 22 Si 0.897 3.103 23 H -0.280 1.280 24 H -0.274 1.274 25 H -0.285 1.285 26 C 0.046 3.954 27 H 0.066 0.934 28 H 0.104 0.896 29 H 0.066 0.934 30 H 0.100 0.900 31 H 0.100 0.900 32 H 0.059 0.941 33 H 0.096 0.904 34 H 0.063 0.937 35 H 0.078 0.922 36 H 0.069 0.931 37 H 0.047 0.953 38 H 0.056 0.944 39 H 0.073 0.927 40 H 0.032 0.968 41 H 0.044 0.956 42 H 0.263 0.737 43 H 0.123 0.877 44 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.052 -21.902 7.776 23.266 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.267 6.267 3 C 0.295 3.705 4 O -0.356 6.356 5 C 0.086 3.914 6 F -0.159 7.159 7 C -0.177 4.177 8 C -0.086 4.086 9 N -0.222 5.222 10 C -0.057 4.057 11 H 0.083 0.917 12 C -0.210 4.210 13 C 0.293 3.707 14 O -0.396 6.396 15 N -0.336 5.336 16 C -0.063 4.063 17 C 0.128 3.872 18 C -0.565 4.565 19 H 0.074 0.926 20 C -0.140 4.140 21 N -0.533 5.533 22 Si 0.724 3.276 23 H -0.207 1.207 24 H -0.199 1.199 25 H -0.210 1.210 26 C -0.082 4.082 27 H 0.085 0.915 28 H 0.122 0.878 29 H 0.085 0.915 30 H 0.118 0.882 31 H 0.119 0.881 32 H 0.077 0.923 33 H 0.114 0.886 34 H 0.082 0.918 35 H 0.097 0.903 36 H 0.088 0.912 37 H 0.066 0.934 38 H 0.074 0.926 39 H 0.091 0.909 40 H 0.050 0.950 41 H 0.062 0.938 42 H 0.073 0.927 43 H 0.141 0.859 44 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges -1.953 -20.749 8.307 22.436 hybrid contribution -0.409 -0.443 -1.923 2.015 sum -2.362 -21.193 6.385 22.259 Atomic orbital electron populations 1.23364 0.75747 1.03975 1.03002 1.86531 1.23877 1.32629 1.83664 1.23601 0.91264 0.82104 0.73518 1.90759 1.66047 1.36030 1.42784 1.22137 0.86217 0.96199 0.86884 1.92949 1.86763 1.81112 1.55070 1.23337 0.98010 1.01755 0.94596 1.23173 0.95620 0.87742 1.02033 1.63534 1.03417 1.20981 1.34256 1.21913 0.91629 0.95472 0.96664 0.91703 1.22083 0.95906 1.02642 1.00406 1.19998 0.84500 0.87186 0.78967 1.90685 1.24843 1.70891 1.53153 1.48100 1.15511 1.14696 1.55264 1.21786 0.86599 0.97331 1.00542 1.19272 0.97086 0.74500 0.96331 1.21431 1.39976 0.92595 1.02504 0.92586 1.24921 0.95695 0.95519 0.97897 1.69930 1.47766 0.97712 1.37935 0.86517 0.79414 0.77727 0.83896 1.20655 1.19931 1.21048 1.23433 0.95821 0.90095 0.98897 0.91547 0.87771 0.91501 0.88151 0.88106 0.92313 0.88588 0.91813 0.90331 0.91200 0.93421 0.92553 0.90853 0.95019 0.93781 0.92727 0.85871 0.90214 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 10.56 101.05 1.07 1.33 16 2 O -0.35 -3.99 10.56 -39.25 -0.41 -4.40 16 3 C 0.46 6.25 7.04 36.00 0.25 6.51 16 4 O -0.47 -7.80 15.17 -18.75 -0.28 -8.09 16 5 C 0.11 1.40 1.52 -89.95 -0.14 1.26 16 6 F -0.18 -2.45 16.95 2.25 0.04 -2.41 16 7 C -0.14 -1.33 6.32 -24.59 -0.16 -1.49 16 8 C 0.04 0.43 5.20 -2.30 -0.01 0.42 16 9 N -0.50 -7.40 4.75 -224.68 -1.07 -8.47 16 10 C 0.06 0.85 1.27 -68.86 -0.09 0.76 16 11 H 0.07 0.94 7.30 -51.93 -0.38 0.56 16 12 C -0.15 -1.80 8.64 37.16 0.32 -1.48 16 13 C 0.51 10.74 6.62 -10.99 -0.07 10.66 16 14 O -0.52 -13.34 14.96 5.56 0.08 -13.26 16 15 N -0.60 -12.85 2.86 -182.95 -0.52 -13.37 16 16 C 0.08 1.27 8.79 59.85 0.53 1.80 16 17 C 0.25 6.55 5.16 -5.19 -0.03 6.52 16 18 C -0.53 -15.15 9.39 -34.44 -0.32 -15.47 16 19 H 0.06 1.62 7.81 -52.49 -0.41 1.21 16 20 C 0.06 1.79 5.46 -17.82 -0.10 1.69 16 21 N -0.89 -26.93 13.29 55.43 0.74 -26.20 16 22 Si 0.90 22.29 29.54 -169.99 -5.02 17.27 16 23 H -0.28 -6.73 7.11 56.52 0.40 -6.32 16 24 H -0.27 -6.85 7.11 56.52 0.40 -6.45 16 25 H -0.28 -7.02 7.11 56.52 0.40 -6.62 16 26 C 0.05 0.74 4.72 -2.84 -0.01 0.73 16 27 H 0.07 0.56 8.13 -51.93 -0.42 0.14 16 28 H 0.10 0.52 8.14 -51.93 -0.42 0.09 16 29 H 0.07 0.52 8.13 -51.93 -0.42 0.10 16 30 H 0.10 0.89 8.05 -51.93 -0.42 0.47 16 31 H 0.10 0.75 8.14 -51.93 -0.42 0.33 16 32 H 0.06 0.54 7.26 -51.93 -0.38 0.17 16 33 H 0.10 0.83 8.11 -51.93 -0.42 0.41 16 34 H 0.06 0.58 6.37 -51.93 -0.33 0.25 16 35 H 0.08 0.84 4.76 -51.93 -0.25 0.59 16 36 H 0.07 0.91 8.13 -51.93 -0.42 0.48 16 37 H 0.05 0.63 7.11 -51.93 -0.37 0.26 16 38 H 0.06 0.73 5.93 -51.93 -0.31 0.42 16 39 H 0.07 1.19 8.07 -51.93 -0.42 0.77 16 40 H 0.03 0.84 8.07 -51.93 -0.42 0.42 16 41 H 0.04 1.32 7.42 -51.93 -0.39 0.94 16 42 H 0.26 7.48 8.31 -40.82 -0.34 7.14 16 43 H 0.12 2.30 6.81 -51.93 -0.35 1.95 16 44 H 0.08 1.45 7.23 -51.93 -0.38 1.08 16 LS Contribution 359.40 15.07 5.42 5.42 Total: -1.00 -35.64 359.40 -6.26 -41.90 By element: Atomic # 1 Polarization: 4.84 SS G_CDS: -6.46 Total: -1.62 kcal Atomic # 6 Polarization: 12.00 SS G_CDS: 1.24 Total: 13.24 kcal Atomic # 7 Polarization: -47.18 SS G_CDS: -0.85 Total: -48.03 kcal Atomic # 8 Polarization: -25.13 SS G_CDS: -0.62 Total: -25.75 kcal Atomic # 9 Polarization: -2.45 SS G_CDS: 0.04 Total: -2.41 kcal Atomic # 14 Polarization: 22.29 SS G_CDS: -5.02 Total: 17.27 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -35.64 -6.26 -41.90 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000752086310.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -96.062 kcal (2) G-P(sol) polarization free energy of solvation -35.645 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -131.706 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.255 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.900 kcal (6) G-S(sol) free energy of system = (1) + (5) -137.962 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.58 seconds