Wall clock time and date at job start Tue Mar 31 2020 11:06:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.50690 * 112.85331 * 2 1 4 4 O 1.21284 * 120.00098 * 230.33065 * 3 2 1 5 5 N 1.34777 * 120.00050 * 50.32789 * 3 2 1 6 6 C 1.46504 * 119.99637 * 180.02562 * 5 3 2 7 7 H 1.08993 * 109.47378 * 324.99749 * 6 5 3 8 8 C 1.53002 * 109.46876 * 85.00417 * 6 5 3 9 9 C 1.53001 * 109.46637 * 179.97438 * 8 6 5 10 10 C 1.52996 * 109.47486 * 299.99742 * 9 8 6 11 11 C 1.53002 * 109.46972 * 60.00463 * 10 9 8 12 12 H 1.09002 * 109.47070 * 179.97438 * 11 10 9 13 13 N 1.46505 * 109.47411 * 59.99834 * 11 10 9 14 14 C 1.36929 * 119.99833 * 84.99952 * 13 11 10 15 15 H 1.08000 * 120.00309 * 359.97438 * 14 13 11 16 16 C 1.38813 * 119.99926 * 179.97438 * 14 13 11 17 17 N 1.31619 * 120.00145 * 179.97438 * 16 14 13 18 18 Si 1.86800 * 120.00018 * 0.02562 * 16 14 13 19 19 H 1.48494 * 109.47324 * 89.99565 * 18 16 14 20 20 H 1.48496 * 109.47217 * 209.99742 * 18 16 14 21 21 H 1.48502 * 109.47010 * 329.99955 * 18 16 14 22 22 C 1.52997 * 109.46817 * 299.99733 * 11 10 9 23 23 C 1.53782 * 113.61188 * 131.19825 * 2 1 3 24 24 C 1.53950 * 87.02576 * 89.22474 * 23 2 1 25 25 F 1.39902 * 113.53781 * 270.81554 * 24 23 2 26 26 F 1.39904 * 113.66908 * 139.92875 * 24 23 2 27 27 C 1.53783 * 87.10795 * 25.36408 * 24 23 2 28 28 H 1.09003 * 109.46708 * 69.66864 * 1 2 3 29 29 H 1.08998 * 109.47784 * 189.66688 * 1 2 3 30 30 H 1.08997 * 109.47118 * 309.67069 * 1 2 3 31 31 H 0.96998 * 120.00021 * 0.02562 * 5 3 2 32 32 H 1.08996 * 109.47407 * 59.99957 * 8 6 5 33 33 H 1.08992 * 109.47063 * 299.99561 * 8 6 5 34 34 H 1.09001 * 109.47109 * 179.97438 * 9 8 6 35 35 H 1.09004 * 109.47086 * 60.00158 * 9 8 6 36 36 H 1.08996 * 109.47452 * 300.00003 * 10 9 8 37 37 H 1.09000 * 109.47054 * 180.02562 * 10 9 8 38 38 H 0.97000 * 119.99634 * 265.00306 * 13 11 10 39 39 H 0.96993 * 120.00121 * 180.02562 * 17 16 14 40 40 H 1.08998 * 109.47533 * 179.97438 * 22 11 10 41 41 H 1.08996 * 109.47853 * 300.00202 * 22 11 10 42 42 H 1.09001 * 113.61382 * 203.75165 * 23 2 1 43 43 H 1.09003 * 113.61265 * 334.64799 * 23 2 1 44 44 H 1.09006 * 113.61729 * 220.08874 * 27 24 23 45 45 H 1.08998 * 113.69438 * 89.20043 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.1153 1.3886 0.0000 4 8 2.9686 1.6870 -0.8085 5 7 1.6903 2.2990 0.8984 6 6 2.2590 3.6492 0.8980 7 1 3.3133 3.5993 0.6260 8 6 1.5111 4.5172 -0.1161 9 6 2.1046 5.9274 -0.1160 10 6 1.9658 6.5391 1.2794 11 6 2.7137 5.6712 2.2934 12 1 2.6152 6.1072 3.2876 13 7 4.1309 5.6046 1.9281 14 6 4.9899 6.5900 2.3354 15 1 4.6227 7.4166 2.9256 16 6 6.3328 6.5267 1.9898 17 7 7.1585 7.4741 2.3808 18 14 6.9679 5.0974 0.9684 19 1 6.8685 5.4369 -0.4738 20 1 8.3865 4.8312 1.3176 21 1 6.1536 3.8878 1.2494 22 6 2.1202 4.2610 2.2935 23 6 2.1460 -0.9281 1.0602 24 6 2.0949 -2.0421 -0.0011 25 9 0.8941 -2.7599 -0.0003 26 9 3.2236 -2.8688 -0.0024 27 6 2.1460 -0.9282 -1.0602 28 1 -0.3633 0.3571 -0.9637 29 1 -0.3634 -1.0130 0.1726 30 1 -0.3633 0.6560 0.7910 31 1 1.0081 2.0602 1.5452 32 1 0.4568 4.5670 0.1559 33 1 1.6096 4.0812 -1.1101 34 1 1.5721 6.5457 -0.8387 35 1 3.1590 5.8778 -0.3879 36 1 0.9114 6.5887 1.5512 37 1 2.3882 7.5440 1.2793 38 1 4.4606 4.8624 1.3977 39 1 8.0967 7.4301 2.1390 40 1 2.6532 3.6424 3.0155 41 1 1.0658 4.3104 2.5653 42 1 3.1585 -0.6478 1.3507 43 1 1.4938 -1.1080 1.9150 44 1 1.4940 -1.1081 -1.9150 45 1 3.1580 -0.6471 -1.3517 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000981451329.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:06:42 Heat of formation + Delta-G solvation = -114.591741 kcal Electronic energy + Delta-G solvation = -27826.036947 eV Core-core repulsion = 23707.637289 eV Total energy + Delta-G solvation = -4118.399659 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 316.170 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -49.18446 -47.49693 -40.73252 -38.81411 -37.23648 -34.72064 -33.15356 -31.21275 -30.25714 -29.12209 -28.41370 -26.72298 -24.85938 -23.40732 -22.32136 -21.98904 -21.04262 -19.63453 -18.65230 -18.17605 -17.75659 -17.15500 -16.77032 -16.20997 -16.06007 -15.21568 -14.74525 -14.60491 -14.46698 -14.26617 -14.08705 -13.99824 -13.86509 -13.83777 -13.60418 -12.88291 -12.76483 -12.64152 -12.51841 -12.28787 -12.21513 -12.10916 -11.69306 -11.60219 -11.42712 -11.06288 -10.91527 -10.83859 -10.78276 -10.35856 -10.28749 -10.21058 -9.95828 -9.59507 -9.54792 -9.05016 -8.86014 -7.26449 -5.76587 -3.11837 2.41471 2.90827 3.12237 3.39113 3.40353 3.44859 3.49336 3.78929 3.80635 4.05473 4.52270 4.60602 4.65413 4.86890 4.95900 5.03975 5.06338 5.08195 5.22259 5.31497 5.35543 5.38932 5.39538 5.52183 5.55792 5.59594 5.66257 5.72626 5.74958 5.93220 5.93854 6.02166 6.19312 6.28168 6.35825 6.51374 6.64756 6.70974 6.86479 6.95329 7.41072 7.99612 8.11258 8.42582 9.21058 9.93998 10.13045 11.41737 Molecular weight = 316.17amu Principal moments of inertia in cm(-1) A = 0.016649 B = 0.003713 C = 0.003264 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1681.403201 B = 7539.007287 C = 8575.246859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.137 4.137 2 C -0.105 4.105 3 C 0.530 3.470 4 O -0.529 6.529 5 N -0.719 5.719 6 C 0.142 3.858 7 H 0.091 0.909 8 C -0.122 4.122 9 C -0.111 4.111 10 C -0.136 4.136 11 C 0.185 3.815 12 H 0.061 0.939 13 N -0.746 5.746 14 C -0.243 4.243 15 H 0.091 0.909 16 C 0.007 3.993 17 N -0.934 5.934 18 Si 0.878 3.122 19 H -0.283 1.283 20 H -0.291 1.291 21 H -0.278 1.278 22 C -0.131 4.131 23 C -0.148 4.148 24 C 0.256 3.744 25 F -0.177 7.177 26 F -0.187 7.187 27 C -0.139 4.139 28 H 0.071 0.929 29 H 0.079 0.921 30 H 0.069 0.931 31 H 0.397 0.603 32 H 0.058 0.942 33 H 0.059 0.941 34 H 0.053 0.947 35 H 0.072 0.928 36 H 0.047 0.953 37 H 0.067 0.933 38 H 0.361 0.639 39 H 0.259 0.741 40 H 0.069 0.931 41 H 0.067 0.933 42 H 0.118 0.882 43 H 0.103 0.897 44 H 0.099 0.901 45 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -17.988 -17.135 -3.520 25.091 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 C -0.109 4.109 3 C 0.315 3.685 4 O -0.405 6.405 5 N -0.369 5.369 6 C 0.039 3.961 7 H 0.109 0.891 8 C -0.160 4.160 9 C -0.149 4.149 10 C -0.176 4.176 11 C 0.075 3.925 12 H 0.078 0.922 13 N -0.390 5.390 14 C -0.372 4.372 15 H 0.109 0.891 16 C -0.189 4.189 17 N -0.582 5.582 18 Si 0.708 3.292 19 H -0.210 1.210 20 H -0.217 1.217 21 H -0.204 1.204 22 C -0.170 4.170 23 C -0.187 4.187 24 C 0.220 3.780 25 F -0.158 7.158 26 F -0.168 7.168 27 C -0.178 4.178 28 H 0.090 0.910 29 H 0.097 0.903 30 H 0.088 0.912 31 H 0.232 0.768 32 H 0.077 0.923 33 H 0.078 0.922 34 H 0.072 0.928 35 H 0.090 0.910 36 H 0.066 0.934 37 H 0.086 0.914 38 H 0.195 0.805 39 H 0.069 0.931 40 H 0.087 0.913 41 H 0.085 0.915 42 H 0.136 0.864 43 H 0.122 0.878 44 H 0.118 0.882 45 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -17.243 -16.747 -3.986 24.365 hybrid contribution 0.269 -1.289 -0.455 1.393 sum -16.974 -18.036 -4.441 25.162 Atomic orbital electron populations 1.21763 0.90174 1.04014 1.03475 1.21886 0.97877 0.92895 0.98207 1.19888 0.82070 0.85475 0.81075 1.90752 1.31563 1.79808 1.38369 1.46144 1.42817 1.12648 1.35268 1.21109 0.99037 0.79603 0.96376 0.89142 1.21865 0.99124 0.96225 0.98810 1.21372 1.01896 0.94059 0.97569 1.22153 0.98663 1.00959 0.95800 1.20128 0.84530 0.91183 0.96666 0.92151 1.42871 1.03778 1.27659 1.64704 1.19062 0.89031 1.01332 1.27807 0.89133 1.24630 0.96046 0.97692 1.00497 1.69692 1.03962 1.33976 1.50533 0.86658 0.78308 0.83222 0.80963 1.20959 1.21726 1.20405 1.22126 1.01052 0.98702 0.95133 1.24171 1.05010 0.92046 0.97436 1.21973 0.71785 0.83171 1.01064 1.92992 1.45011 1.80538 1.97258 1.93032 1.50770 1.75743 1.97215 1.24076 1.05768 0.90827 0.97089 0.90966 0.90260 0.91208 0.76841 0.92336 0.92234 0.92816 0.90962 0.93448 0.91416 0.80524 0.93081 0.91265 0.91478 0.86369 0.87813 0.88231 0.85534 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -0.87 8.95 37.16 0.33 -0.54 16 2 C -0.11 -0.92 1.25 -154.85 -0.19 -1.12 16 3 C 0.53 6.58 6.88 -10.99 -0.08 6.51 16 4 O -0.53 -8.99 15.57 5.55 0.09 -8.90 16 5 N -0.72 -7.98 4.97 -53.80 -0.27 -8.25 16 6 C 0.14 2.04 2.28 -67.92 -0.16 1.88 16 7 H 0.09 1.67 5.94 -51.93 -0.31 1.36 16 8 C -0.12 -1.68 5.50 -26.73 -0.15 -1.83 16 9 C -0.11 -1.75 5.76 -26.73 -0.15 -1.91 16 10 C -0.14 -2.19 5.61 -26.73 -0.15 -2.34 16 11 C 0.19 3.27 3.10 -67.93 -0.21 3.06 16 12 H 0.06 1.10 8.08 -51.93 -0.42 0.68 16 13 N -0.75 -16.94 4.08 -53.42 -0.22 -17.16 16 14 C -0.24 -6.67 10.41 -15.06 -0.16 -6.82 16 15 H 0.09 2.65 8.06 -52.49 -0.42 2.23 16 16 C 0.01 0.21 5.50 -17.43 -0.10 0.11 16 17 N -0.93 -29.26 13.97 55.49 0.78 -28.48 16 18 Si 0.88 22.67 27.74 -169.99 -4.71 17.95 16 19 H -0.28 -7.34 7.11 56.52 0.40 -6.94 16 20 H -0.29 -7.60 7.11 56.52 0.40 -7.20 16 21 H -0.28 -6.89 6.52 56.52 0.37 -6.52 16 22 C -0.13 -1.81 5.08 -26.73 -0.14 -1.95 16 23 C -0.15 -1.19 7.00 -25.83 -0.18 -1.37 16 24 C 0.26 2.37 3.27 -25.83 -0.08 2.28 16 25 F -0.18 -1.65 15.52 2.25 0.03 -1.62 16 26 F -0.19 -2.09 17.41 2.25 0.04 -2.05 16 27 C -0.14 -1.29 6.78 -25.92 -0.18 -1.46 16 28 H 0.07 0.46 8.14 -51.93 -0.42 0.04 16 29 H 0.08 0.47 6.20 -51.93 -0.32 0.15 16 30 H 0.07 0.35 7.11 -51.93 -0.37 -0.02 16 31 H 0.40 3.11 7.59 -40.82 -0.31 2.80 16 32 H 0.06 0.69 8.14 -51.93 -0.42 0.26 16 33 H 0.06 0.88 8.14 -51.93 -0.42 0.45 16 34 H 0.05 0.77 8.14 -51.93 -0.42 0.34 16 35 H 0.07 1.37 7.60 -51.93 -0.39 0.98 16 36 H 0.05 0.64 8.14 -51.93 -0.42 0.22 16 37 H 0.07 1.24 8.14 -51.93 -0.42 0.82 16 38 H 0.36 8.35 3.92 -40.82 -0.16 8.19 16 39 H 0.26 7.78 8.31 -40.82 -0.34 7.44 16 40 H 0.07 0.98 8.14 -51.93 -0.42 0.56 16 41 H 0.07 0.73 8.14 -51.93 -0.42 0.30 16 42 H 0.12 1.03 8.09 -51.93 -0.42 0.61 16 43 H 0.10 0.62 8.10 -51.93 -0.42 0.20 16 44 H 0.10 0.78 8.10 -51.93 -0.42 0.36 16 45 H 0.13 1.35 7.45 -51.93 -0.39 0.97 16 LS Contribution 357.05 15.07 5.38 5.38 Total: -1.00 -32.97 357.05 -7.37 -40.34 By element: Atomic # 1 Polarization: 15.19 SS G_CDS: -6.91 Total: 8.28 kcal Atomic # 6 Polarization: -3.91 SS G_CDS: -1.58 Total: -5.49 kcal Atomic # 7 Polarization: -54.19 SS G_CDS: 0.29 Total: -53.90 kcal Atomic # 8 Polarization: -8.99 SS G_CDS: 0.09 Total: -8.90 kcal Atomic # 9 Polarization: -3.74 SS G_CDS: 0.07 Total: -3.67 kcal Atomic # 14 Polarization: 22.67 SS G_CDS: -4.71 Total: 17.95 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -32.97 -7.37 -40.34 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000981451329.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.247 kcal (2) G-P(sol) polarization free energy of solvation -32.974 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.221 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.371 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.345 kcal (6) G-S(sol) free energy of system = (1) + (5) -114.592 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds