Wall clock time and date at job start Tue Mar 31 2020 11:31:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.09006 * 109.47258 * 2 1 4 4 N 1.46891 * 109.47243 * 119.99932 * 2 1 3 5 5 C 1.46909 * 111.00183 * 173.85571 * 4 2 1 6 6 C 1.46897 * 111.00071 * 297.80931 * 4 2 1 7 7 C 1.50705 * 109.47101 * 170.00065 * 6 4 2 8 8 C 1.38282 * 119.92259 * 269.72653 * 7 6 4 9 9 C 1.38112 * 120.07149 * 179.72588 * 8 7 6 10 10 C 1.38910 * 119.92257 * 0.55114 * 9 8 7 11 11 N 1.39679 * 120.06942 * 179.74855 * 10 9 8 12 12 C 1.46500 * 119.99652 * 179.97438 * 11 10 9 13 13 C 1.46495 * 120.00120 * 359.97438 * 11 10 9 14 14 C 1.50697 * 109.47728 * 90.00103 * 13 11 10 15 15 H 1.08002 * 119.99555 * 359.97438 * 14 13 11 16 16 C 1.37870 * 120.00370 * 179.97438 * 14 13 11 17 17 N 1.31513 * 120.00061 * 359.97438 * 16 14 13 18 18 Si 1.86806 * 120.00185 * 179.97438 * 16 14 13 19 19 H 1.48497 * 109.46933 * 90.00082 * 18 16 14 20 20 H 1.48501 * 109.47099 * 209.99890 * 18 16 14 21 21 H 1.48498 * 109.46936 * 329.99978 * 18 16 14 22 22 C 1.38907 * 119.85076 * 359.72247 * 10 9 8 23 23 C 1.38099 * 119.93072 * 0.02562 * 22 10 9 24 24 C 1.53003 * 109.47015 * 240.00091 * 2 1 3 25 25 C 1.53001 * 115.54961 * 294.52839 * 24 2 1 26 26 C 1.53005 * 117.49988 * 148.85959 * 24 2 1 27 27 C 1.53002 * 117.49814 * 80.19871 * 24 2 1 28 28 H 1.08998 * 109.47138 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.47142 * 300.00155 * 1 2 3 30 30 H 1.08998 * 109.47177 * 59.99736 * 1 2 3 31 31 H 1.09002 * 109.47214 * 178.57518 * 5 4 2 32 32 H 1.09004 * 109.46772 * 58.57695 * 5 4 2 33 33 H 1.08995 * 109.47010 * 298.57854 * 5 4 2 34 34 H 1.09004 * 109.47340 * 289.99602 * 6 4 2 35 35 H 1.08996 * 109.47306 * 50.00136 * 6 4 2 36 36 H 1.07999 * 119.96343 * 359.97438 * 8 7 6 37 37 H 1.07999 * 120.03305 * 180.27462 * 9 8 7 38 38 H 1.08997 * 109.47034 * 89.99786 * 12 11 10 39 39 H 1.08995 * 109.47210 * 210.00002 * 12 11 10 40 40 H 1.08998 * 109.47224 * 329.99961 * 12 11 10 41 41 H 1.09003 * 109.47007 * 210.00224 * 13 11 10 42 42 H 1.09000 * 109.47284 * 329.99258 * 13 11 10 43 43 H 0.96998 * 120.00190 * 179.97438 * 17 16 14 44 44 H 1.08009 * 120.03166 * 179.97438 * 22 10 9 45 45 H 1.07995 * 119.96539 * 179.97438 * 23 22 10 46 46 H 1.08996 * 109.47021 * 57.79664 * 25 24 2 47 47 H 1.08999 * 109.47289 * 177.79947 * 25 24 2 48 48 H 1.08997 * 109.47050 * 297.79972 * 25 24 2 49 49 H 1.08998 * 117.49658 * 359.97438 * 26 24 2 50 50 H 1.08996 * 117.50103 * 145.01907 * 26 24 2 51 51 H 1.09001 * 117.49285 * 214.97693 * 27 24 2 52 52 H 1.08992 * 117.49900 * 359.97438 * 27 24 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 7 2.0196 -0.6924 1.1994 5 6 3.4808 -0.8405 1.1622 6 6 1.5919 0.0033 2.4204 7 6 1.8960 -0.8558 3.6207 8 6 0.9511 -1.7529 4.0840 9 6 1.2287 -2.5458 5.1803 10 6 2.4542 -2.4330 5.8246 11 7 2.7360 -3.2296 6.9368 12 6 4.0292 -3.1098 7.6147 13 6 1.7386 -4.1848 7.4254 14 6 1.9362 -5.5123 6.7401 15 1 2.7257 -5.6323 6.0129 16 6 1.1093 -6.5736 7.0413 17 7 0.1483 -6.4276 7.9272 18 14 1.3539 -8.2190 6.1913 19 1 2.2962 -9.0499 6.9830 20 1 0.0486 -8.9186 6.0820 21 1 1.9114 -7.9963 4.8330 22 6 3.3988 -1.5267 5.3599 23 6 3.1168 -0.7407 4.2600 24 6 2.0400 -0.7212 -1.2493 25 6 1.7196 -2.2154 -1.3256 26 6 3.3706 -0.2529 -1.8417 27 6 2.0576 0.0654 -2.5615 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8899 31 1 3.8193 -1.3336 2.0734 32 1 3.9439 0.1435 1.0881 33 1 3.7632 -1.4410 0.2976 34 1 2.1267 0.9493 2.5059 35 1 0.5200 0.1948 2.3729 36 1 -0.0033 -1.8366 3.5856 37 1 0.4920 -3.2494 5.5389 38 1 3.9595 -2.3568 8.3997 39 1 4.2990 -4.0697 8.0549 40 1 4.7913 -2.8136 6.8939 41 1 1.8533 -4.3111 8.5020 42 1 0.7387 -3.8091 7.2082 43 1 -0.4337 -7.1742 8.1388 44 1 4.3524 -1.4364 5.8589 45 1 3.8506 -0.0356 3.8985 46 1 0.6406 -2.3589 -1.2700 47 1 2.0918 -2.6192 -2.2671 48 1 2.1982 -2.7325 -0.4940 49 1 3.8825 0.5693 -1.3417 50 1 4.0176 -1.0091 -2.2862 51 1 1.8414 -0.4817 -3.4791 52 1 1.7055 1.0966 -2.5348 RHF calculation, no. of doubly occupied orbitals= 61 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000091900742.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:31:53 Heat of formation + Delta-G solvation = 60.396425 kcal Electronic energy + Delta-G solvation = -26847.174662 eV Core-core repulsion = 23426.425684 eV Total energy + Delta-G solvation = -3420.748978 eV No. of doubly occupied orbitals = 61 Molecular weight (most abundant/longest-lived isotopes) = 316.221 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -39.73916 -38.80436 -36.57003 -35.06004 -32.69873 -31.19983 -30.41424 -29.85684 -28.46712 -27.79883 -26.62110 -24.97744 -24.14741 -22.76610 -22.48553 -21.67926 -21.09933 -19.49684 -18.68450 -16.63173 -16.43270 -16.05557 -15.67981 -15.19800 -14.93413 -14.74870 -14.31551 -14.16476 -13.82693 -13.67564 -13.35443 -12.97725 -12.93546 -12.84518 -12.52483 -12.33899 -12.14670 -12.03393 -11.96685 -11.68998 -11.63607 -11.50049 -11.43983 -11.34588 -11.21419 -10.94382 -10.77251 -10.67064 -10.63999 -10.22160 -10.16280 -9.86623 -9.76828 -9.71393 -8.79801 -8.49049 -8.23309 -8.14409 -6.43441 -5.99513 -4.15632 2.15013 2.25499 3.27619 3.34501 3.39630 3.52653 4.03413 4.18445 4.43210 4.47440 4.62009 4.69677 4.76424 4.95328 5.17192 5.21607 5.23315 5.31565 5.33441 5.42380 5.53658 5.56757 5.59572 5.64553 5.67570 5.69683 5.76522 5.80387 5.84834 5.86017 5.92509 5.98637 6.04472 6.05365 6.10633 6.11965 6.24413 6.30170 6.35641 6.43299 6.47715 6.67619 6.96232 7.04870 7.14570 7.23070 7.27940 7.31334 7.41972 7.64720 7.82938 8.17524 8.29447 8.51886 8.93578 9.51267 10.97313 Molecular weight = 316.22amu Principal moments of inertia in cm(-1) A = 0.014315 B = 0.003079 C = 0.002784 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1955.457126 B = 9090.934321 C =10055.273134 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.145 4.145 2 C 0.119 3.881 3 H 0.034 0.966 4 N -0.525 5.525 5 C 0.023 3.977 6 C 0.107 3.893 7 C -0.164 4.164 8 C -0.051 4.051 9 C -0.188 4.188 10 C 0.241 3.759 11 N -0.616 5.616 12 C 0.099 3.901 13 C 0.249 3.751 14 C -0.530 4.530 15 H 0.059 0.941 16 C 0.062 3.938 17 N -0.896 5.896 18 Si 0.895 3.105 19 H -0.281 1.281 20 H -0.285 1.285 21 H -0.273 1.273 22 C -0.222 4.222 23 C -0.068 4.068 24 C -0.109 4.109 25 C -0.107 4.107 26 C -0.179 4.179 27 C -0.176 4.176 28 H 0.068 0.932 29 H 0.057 0.943 30 H 0.055 0.945 31 H 0.075 0.925 32 H 0.015 0.985 33 H 0.069 0.931 34 H 0.029 0.971 35 H 0.078 0.922 36 H 0.111 0.889 37 H 0.131 0.869 38 H 0.035 0.965 39 H 0.066 0.934 40 H 0.054 0.946 41 H 0.029 0.971 42 H 0.036 0.964 43 H 0.264 0.736 44 H 0.111 0.889 45 H 0.103 0.897 46 H 0.060 0.940 47 H 0.046 0.954 48 H 0.071 0.929 49 H 0.089 0.911 50 H 0.093 0.907 51 H 0.093 0.907 52 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.210 14.382 -15.451 21.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C 0.011 3.989 3 H 0.052 0.948 4 N -0.249 5.249 5 C -0.125 4.125 6 C -0.020 4.020 7 C -0.167 4.167 8 C -0.071 4.071 9 C -0.210 4.210 10 C 0.134 3.866 11 N -0.322 5.322 12 C -0.045 4.045 13 C 0.129 3.871 14 C -0.569 4.569 15 H 0.077 0.923 16 C -0.141 4.141 17 N -0.535 5.535 18 Si 0.723 3.277 19 H -0.207 1.207 20 H -0.211 1.211 21 H -0.197 1.197 22 C -0.245 4.245 23 C -0.087 4.087 24 C -0.110 4.110 25 C -0.164 4.164 26 C -0.216 4.216 27 C -0.213 4.213 28 H 0.087 0.913 29 H 0.076 0.924 30 H 0.074 0.926 31 H 0.094 0.906 32 H 0.033 0.967 33 H 0.087 0.913 34 H 0.047 0.953 35 H 0.096 0.904 36 H 0.129 0.871 37 H 0.149 0.851 38 H 0.053 0.947 39 H 0.085 0.915 40 H 0.073 0.927 41 H 0.047 0.953 42 H 0.054 0.946 43 H 0.073 0.927 44 H 0.129 0.871 45 H 0.121 0.879 46 H 0.079 0.921 47 H 0.065 0.935 48 H 0.090 0.910 49 H 0.108 0.892 50 H 0.111 0.889 51 H 0.111 0.889 52 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 3.891 13.666 -15.140 20.764 hybrid contribution 0.598 -0.233 -0.408 0.761 sum 4.489 13.434 -15.548 21.032 Atomic orbital electron populations 1.21858 0.94142 1.02954 1.01242 1.21086 0.95464 0.93902 0.88495 0.94800 1.62016 1.11764 1.50418 1.00672 1.22478 0.87315 0.99413 1.03283 1.20906 1.00314 0.93290 0.87462 1.19110 0.95856 1.02847 0.98852 1.20615 0.98042 0.93770 0.94654 1.20885 0.97489 1.03749 0.98908 1.17939 0.92938 0.88894 0.86823 1.47089 1.16431 1.40034 1.28672 1.21457 0.85776 1.01142 0.96149 1.19274 0.86930 0.86224 0.94624 1.21581 1.15956 0.95536 1.23840 0.92268 1.24956 0.94953 0.99011 0.95134 1.69929 1.18638 1.32074 1.32831 0.86530 0.77535 0.83535 0.80104 1.20663 1.21072 1.19744 1.20509 0.99825 1.02493 1.01716 1.20497 0.95521 0.97898 0.94826 1.21429 1.00171 0.96246 0.93142 1.21231 1.01892 0.91912 1.01361 1.23097 0.90851 1.03372 1.04270 1.23047 1.01582 1.00849 0.95841 0.91347 0.92387 0.92558 0.90646 0.96673 0.91267 0.95317 0.90406 0.87128 0.85150 0.94693 0.91506 0.92747 0.95273 0.94620 0.92666 0.87061 0.87873 0.92122 0.93482 0.90995 0.89248 0.88880 0.88866 0.89174 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.40 8.88 37.16 0.33 -1.07 16 2 C 0.12 1.24 1.94 -67.72 -0.13 1.11 16 3 H 0.03 0.36 8.09 -51.93 -0.42 -0.06 16 4 N -0.52 -6.45 4.18 -236.33 -0.99 -7.44 16 5 C 0.02 0.28 8.23 60.07 0.49 0.77 16 6 C 0.11 1.37 4.96 -4.98 -0.02 1.35 16 7 C -0.16 -2.55 4.90 -104.58 -0.51 -3.06 16 8 C -0.05 -0.90 9.69 -39.61 -0.38 -1.28 16 9 C -0.19 -3.84 9.21 -39.38 -0.36 -4.20 16 10 C 0.24 4.91 6.55 -83.79 -0.55 4.37 16 11 N -0.62 -13.32 2.99 -181.01 -0.54 -13.86 16 12 C 0.10 1.75 10.19 59.85 0.61 2.36 16 13 C 0.25 6.29 4.91 -5.20 -0.03 6.27 16 14 C -0.53 -14.57 9.39 -34.44 -0.32 -14.89 16 15 H 0.06 1.67 7.81 -52.49 -0.41 1.26 16 16 C 0.06 1.71 5.46 -17.82 -0.10 1.61 16 17 N -0.90 -25.79 13.29 55.43 0.74 -25.05 16 18 Si 0.90 21.45 29.54 -169.99 -5.02 16.43 16 19 H -0.28 -6.62 7.11 56.52 0.40 -6.22 16 20 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 21 H -0.27 -6.54 7.11 56.52 0.40 -6.13 16 22 C -0.22 -3.89 9.21 -39.38 -0.36 -4.25 16 23 C -0.07 -1.06 7.88 -39.61 -0.31 -1.37 16 24 C -0.11 -1.05 0.79 -154.50 -0.12 -1.17 16 25 C -0.11 -1.09 9.10 37.16 0.34 -0.75 16 26 C -0.18 -1.55 8.29 -26.69 -0.22 -1.78 16 27 C -0.18 -1.44 9.96 -26.69 -0.27 -1.70 16 28 H 0.07 0.72 7.06 -51.93 -0.37 0.35 16 29 H 0.06 0.55 6.25 -51.93 -0.32 0.23 16 30 H 0.06 0.47 8.14 -51.93 -0.42 0.05 16 31 H 0.07 1.03 5.79 -51.93 -0.30 0.73 16 32 H 0.01 0.17 8.14 -51.93 -0.42 -0.26 16 33 H 0.07 0.80 5.45 -51.93 -0.28 0.51 16 34 H 0.03 0.35 8.06 -51.93 -0.42 -0.07 16 35 H 0.08 0.94 5.85 -51.93 -0.30 0.64 16 36 H 0.11 1.75 8.06 -52.49 -0.42 1.33 16 37 H 0.13 2.95 6.14 -52.49 -0.32 2.62 16 38 H 0.03 0.56 8.14 -51.93 -0.42 0.14 16 39 H 0.07 1.21 8.07 -51.93 -0.42 0.79 16 40 H 0.05 0.86 6.20 -51.93 -0.32 0.53 16 41 H 0.03 0.77 8.07 -51.93 -0.42 0.35 16 42 H 0.04 0.95 6.20 -51.93 -0.32 0.63 16 43 H 0.26 7.20 8.31 -40.82 -0.34 6.86 16 44 H 0.11 1.77 6.14 -52.48 -0.32 1.44 16 45 H 0.10 1.38 7.96 -52.49 -0.42 0.96 16 46 H 0.06 0.62 7.10 -51.93 -0.37 0.25 16 47 H 0.05 0.43 8.11 -51.93 -0.42 0.01 16 48 H 0.07 0.86 7.16 -51.93 -0.37 0.48 16 49 H 0.09 0.78 8.14 -51.93 -0.42 0.35 16 50 H 0.09 0.77 8.14 -51.93 -0.42 0.35 16 51 H 0.09 0.70 8.14 -51.93 -0.42 0.28 16 52 H 0.09 0.69 8.14 -51.93 -0.42 0.27 16 LS Contribution 399.72 15.07 6.02 6.02 Total: -1.00 -28.49 399.72 -10.76 -39.25 By element: Atomic # 1 Polarization: 11.40 SS G_CDS: -9.05 Total: 2.35 kcal Atomic # 6 Polarization: -15.78 SS G_CDS: -1.92 Total: -17.70 kcal Atomic # 7 Polarization: -45.56 SS G_CDS: -0.79 Total: -46.35 kcal Atomic # 14 Polarization: 21.45 SS G_CDS: -5.02 Total: 16.43 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -28.49 -10.76 -39.25 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000091900742.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 99.651 kcal (2) G-P(sol) polarization free energy of solvation -28.493 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 71.158 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.254 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.396 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds