Wall clock time and date at job start Tue Mar 31 2020 11:01:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.36873 * 120.00433 * 2 1 4 4 H 1.07998 * 120.00201 * 193.24847 * 3 2 1 5 5 C 1.39045 * 119.99471 * 13.51519 * 3 2 1 6 6 N 1.31368 * 120.00052 * 215.78626 * 5 3 2 7 7 Si 1.86801 * 120.00364 * 35.78946 * 5 3 2 8 8 H 1.48498 * 109.47087 * 97.47471 * 7 5 3 9 9 H 1.48497 * 109.47139 * 217.47639 * 7 5 3 10 10 H 1.48503 * 109.46541 * 337.47600 * 7 5 3 11 11 C 1.34777 * 119.99776 * 179.97438 * 2 1 3 12 12 O 1.21595 * 119.99845 * 177.23977 * 11 2 1 13 13 C 1.47733 * 120.00334 * 357.24135 * 11 2 1 14 14 C 1.39654 * 120.13437 * 24.32871 * 13 11 2 15 15 C 1.38051 * 119.84578 * 179.72582 * 14 13 11 16 16 Cl 1.73598 * 119.92639 * 180.32006 * 15 14 13 17 17 C 1.38484 * 120.13627 * 0.57249 * 15 14 13 18 18 C 1.38420 * 120.28511 * 359.70500 * 17 15 14 19 19 Br 1.89099 * 119.92662 * 180.02562 * 18 17 15 20 20 C 1.38054 * 120.14614 * 359.97438 * 18 17 15 21 21 H 1.08997 * 109.46725 * 343.97497 * 1 2 3 22 22 H 1.08997 * 109.47271 * 103.97986 * 1 2 3 23 23 H 1.08996 * 109.47226 * 223.98000 * 1 2 3 24 24 H 0.96999 * 120.00258 * 180.02562 * 6 5 3 25 25 H 1.07994 * 120.07507 * 359.97438 * 14 13 11 26 26 H 1.07996 * 119.85640 * 179.71696 * 17 15 14 27 27 H 1.07997 * 120.07151 * 180.02562 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1494 1.1853 0.0000 4 1 3.2079 1.1977 -0.2143 5 6 1.4831 2.3728 0.2814 6 7 1.8218 3.4793 -0.3403 7 14 0.1062 2.3948 1.5436 8 1 0.6393 2.8589 2.8496 9 1 -0.9659 3.3170 1.0906 10 1 -0.4492 1.0257 1.6940 11 6 2.1388 -1.1672 0.0005 12 8 3.3537 -1.1679 -0.0502 13 6 1.4015 -2.4459 0.0627 14 6 0.0782 -2.5143 -0.3786 15 6 -0.6034 -3.7135 -0.3231 16 17 -2.2456 -3.8029 -0.8788 17 6 0.0185 -4.8441 0.1798 18 6 1.3280 -4.7812 0.6240 19 35 2.1676 -6.3314 1.3081 20 6 2.0228 -3.5896 0.5678 21 1 -0.3633 0.9877 0.2837 22 1 -0.3633 -0.2483 -0.9972 23 1 -0.3633 -0.7395 0.7136 24 1 1.3572 4.3078 -0.1437 25 1 -0.4094 -1.6320 -0.7661 26 1 -0.5204 -5.7788 0.2254 27 1 3.0445 -3.5420 0.9143 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000129370462.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:01:19 Heat of formation + Delta-G solvation = 44.235125 kcal Electronic energy + Delta-G solvation = -16269.137903 eV Core-core repulsion = 13294.652613 eV Total energy + Delta-G solvation = -2974.485290 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 316.956 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -39.98917 -38.00000 -36.48170 -35.19223 -32.88975 -32.00432 -30.83061 -29.41149 -27.02238 -25.77726 -23.09577 -22.31612 -19.61733 -17.54794 -16.91566 -16.68806 -15.68863 -15.47881 -14.96958 -14.63036 -13.91713 -13.69820 -13.49883 -12.84673 -12.70271 -12.49999 -12.18876 -11.93408 -11.69899 -11.33670 -11.03048 -10.97584 -10.67023 -10.43612 -10.37810 -9.54928 -9.22456 -8.82660 -8.69313 -8.62862 -8.19205 -6.78805 -3.97326 0.84881 1.03358 1.43263 2.09366 2.85057 3.01365 3.06277 3.21342 3.85294 3.93576 4.22333 4.71223 4.83596 4.97412 5.07704 5.23745 5.43035 5.48562 5.61306 5.83828 5.98343 6.06454 6.09197 6.33029 6.56340 7.17345 7.95600 8.19763 8.71218 9.06590 9.56891 10.30098 Molecular weight = 316.96amu Principal moments of inertia in cm(-1) A = 0.018093 B = 0.004773 C = 0.004031 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1547.149148 B = 5865.111358 C = 6944.467575 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.430 5.430 3 C -0.322 4.322 4 H 0.123 0.877 5 C 0.061 3.939 6 N -0.819 5.819 7 Si 0.847 3.153 8 H -0.278 1.278 9 H -0.274 1.274 10 H -0.237 1.237 11 C 0.465 3.535 12 O -0.573 6.573 13 C -0.074 4.074 14 C -0.117 4.117 15 C -0.032 4.032 16 Cl -0.067 7.067 17 C -0.089 4.089 18 C -0.085 4.085 19 Br -0.045 7.045 20 C -0.045 4.045 21 H 0.075 0.925 22 H 0.063 0.937 23 H 0.069 0.931 24 H 0.280 0.720 25 H 0.169 0.831 26 H 0.139 0.861 27 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.666 -16.321 2.288 18.176 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 N -0.147 5.147 3 C -0.448 4.448 4 H 0.140 0.860 5 C -0.149 4.149 6 N -0.451 5.451 7 Si 0.672 3.328 8 H -0.204 1.204 9 H -0.200 1.200 10 H -0.161 1.161 11 C 0.257 3.743 12 O -0.458 6.458 13 C -0.079 4.079 14 C -0.137 4.137 15 C -0.060 4.060 16 Cl -0.038 7.038 17 C -0.111 4.111 18 C -0.165 4.165 19 Br 0.040 6.960 20 C -0.067 4.067 21 H 0.093 0.907 22 H 0.081 0.919 23 H 0.087 0.913 24 H 0.091 0.909 25 H 0.185 0.815 26 H 0.157 0.843 27 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -6.905 -16.611 2.409 18.149 hybrid contribution -1.162 0.573 0.490 1.385 sum -8.067 -16.037 2.899 18.184 Atomic orbital electron populations 1.23052 0.83259 1.02916 1.00088 1.43711 1.04235 1.06027 1.60708 1.19294 0.97333 0.80839 1.47288 0.85980 1.25261 0.97783 0.94925 0.96950 1.69955 1.40484 1.01102 1.33583 0.87894 0.81818 0.79644 0.83446 1.20436 1.19982 1.16149 1.17445 0.87218 0.82258 0.87413 1.90661 1.12762 1.86045 1.56324 1.20238 0.93240 0.95407 0.99001 1.22663 0.94361 0.98276 0.98360 1.20685 0.87016 0.94980 1.03309 1.98365 1.18677 1.98591 1.88182 1.20917 0.93218 0.98190 0.98747 1.21471 0.95571 0.93092 1.06337 1.96694 1.80196 1.33779 1.85345 1.21249 1.00414 0.89473 0.95529 0.90728 0.91901 0.91306 0.90936 0.81456 0.84291 0.83545 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 16. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 0.93 6.57 59.85 0.39 1.32 15 2 N -0.43 -10.09 2.91 -123.32 -0.36 -10.44 15 3 C -0.32 -8.65 9.70 -15.00 -0.15 -8.80 15 4 H 0.12 3.71 7.45 -52.49 -0.39 3.32 15 5 C 0.06 1.56 5.20 -17.45 -0.09 1.47 15 6 N -0.82 -21.84 13.95 55.50 0.77 -21.07 15 7 Si 0.85 17.86 26.01 -169.99 -4.42 13.44 15 8 H -0.28 -6.08 7.11 56.52 0.40 -5.68 15 9 H -0.27 -5.61 7.11 56.52 0.40 -5.20 15 10 H -0.24 -4.50 4.79 56.52 0.27 -4.23 15 11 C 0.47 10.82 7.47 -12.38 -0.09 10.73 15 12 O -0.57 -15.41 16.21 5.28 0.09 -15.33 15 13 C -0.07 -1.36 5.62 -104.97 -0.59 -1.95 15 14 C -0.12 -1.84 7.53 -39.12 -0.29 -2.13 15 15 C -0.03 -0.44 6.31 -39.56 -0.25 -0.69 15 16 Cl -0.07 -0.80 28.95 -51.86 -1.50 -2.30 15 17 C -0.09 -1.16 9.56 -39.42 -0.38 -1.54 15 18 C -0.09 -1.20 6.22 -39.58 -0.25 -1.44 15 19 Br -0.05 -0.55 33.69 -68.01 -2.29 -2.84 15 20 C -0.05 -0.76 9.33 -39.13 -0.37 -1.12 15 21 H 0.07 1.44 2.29 -51.93 -0.12 1.32 15 22 H 0.06 1.02 6.34 -51.93 -0.33 0.69 15 23 H 0.07 1.15 5.92 -51.93 -0.31 0.84 15 24 H 0.28 6.80 8.31 -40.82 -0.34 6.47 15 25 H 0.17 2.51 3.63 -52.49 -0.19 2.32 15 26 H 0.14 1.49 8.06 -52.49 -0.42 1.07 15 27 H 0.15 2.50 7.84 -52.49 -0.41 2.09 15 LS Contribution 264.08 15.07 3.98 3.98 Total: -1.00 -28.49 264.08 -7.23 -35.72 By element: Atomic # 1 Polarization: 4.44 SS G_CDS: -1.44 Total: 3.00 kcal Atomic # 6 Polarization: -2.10 SS G_CDS: -2.06 Total: -4.16 kcal Atomic # 7 Polarization: -31.93 SS G_CDS: 0.42 Total: -31.51 kcal Atomic # 8 Polarization: -15.41 SS G_CDS: 0.09 Total: -15.33 kcal Atomic # 14 Polarization: 17.86 SS G_CDS: -4.42 Total: 13.44 kcal Atomic # 17 Polarization: -0.80 SS G_CDS: -1.50 Total: -2.30 kcal Atomic # 35 Polarization: -0.55 SS G_CDS: -2.29 Total: -2.84 kcal Total LS contribution 3.98 Total: 3.98 kcal Total: -28.49 -7.23 -35.72 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000129370462.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.952 kcal (2) G-P(sol) polarization free energy of solvation -28.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.463 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.228 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.717 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds