Wall clock time and date at job start Tue Mar 31 2020 10:58:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31518 * 1 3 3 Si 1.86803 * 120.00123 * 2 1 4 4 H 1.48490 * 109.47181 * 180.02562 * 3 2 1 5 5 H 1.48498 * 109.46716 * 300.00150 * 3 2 1 6 6 H 1.48500 * 109.46999 * 59.99848 * 3 2 1 7 7 C 1.37874 * 120.00144 * 179.97438 * 2 1 3 8 8 H 1.07994 * 120.00812 * 179.97438 * 7 2 1 9 9 C 1.50703 * 119.99789 * 0.02562 * 7 2 1 10 10 N 1.46506 * 109.47289 * 179.97438 * 9 7 2 11 11 C 1.34774 * 120.00072 * 179.97438 * 10 9 7 12 12 O 1.21559 * 120.00081 * 359.97438 * 11 10 9 13 13 C 1.47796 * 119.99688 * 180.02562 * 11 10 9 14 14 C 1.39606 * 120.14722 * 359.71887 * 13 11 10 15 15 C 1.38022 * 119.84607 * 179.81301 * 14 13 11 16 16 Cl 1.73605 * 119.92638 * 180.19346 * 15 14 13 17 17 C 1.38523 * 120.14649 * 0.44359 * 15 14 13 18 18 C 1.38266 * 120.29953 * 359.79359 * 17 15 14 19 19 C 1.38119 * 120.14523 * 359.97438 * 18 17 15 20 20 Br 1.89101 * 120.06891 * 179.97438 * 19 18 17 21 21 H 0.96997 * 119.99752 * 0.02562 * 1 2 3 22 22 H 1.09001 * 109.47438 * 59.99575 * 9 7 2 23 23 H 1.09004 * 109.47113 * 299.99830 * 9 7 2 24 24 H 0.97001 * 119.99251 * 0.02562 * 10 9 7 25 25 H 1.07996 * 120.07606 * 0.03364 * 14 13 11 26 26 H 1.08002 * 119.84944 * 179.76481 * 17 15 14 27 27 H 1.07998 * 119.92327 * 179.97438 * 18 17 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2492 1.6177 0.0000 4 1 3.7091 1.3464 -0.0006 5 1 1.8904 2.3964 -1.2125 6 1 1.8904 2.3964 1.2125 7 6 2.0046 -1.1940 0.0005 8 1 3.0845 -1.1941 0.0001 9 6 1.2510 -2.4991 0.0005 10 7 2.2030 -3.6127 0.0005 11 6 1.7538 -4.8834 0.0011 12 8 0.5586 -5.1055 0.0020 13 6 2.7142 -6.0067 0.0016 14 6 4.0874 -5.7551 -0.0043 15 6 4.9788 -6.8088 0.0002 16 17 6.6869 -6.4983 -0.0021 17 6 4.5136 -8.1136 0.0013 18 6 3.1549 -8.3698 0.0022 19 6 2.2520 -7.3246 0.0025 20 35 0.3942 -7.6774 0.0030 21 1 -0.4849 0.8400 -0.0004 22 1 0.6247 -2.5571 -0.8896 23 1 0.6240 -2.5567 0.8903 24 1 3.1567 -3.4354 0.0009 25 1 4.4513 -4.7383 -0.0088 26 1 5.2154 -8.9346 0.0009 27 1 2.7989 -9.3894 0.0026 RHF calculation, no. of doubly occupied orbitals= 43 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000220947655.mol2 27 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:58:25 Heat of formation + Delta-G solvation = -8.342467 kcal Electronic energy + Delta-G solvation = -15691.968488 eV Core-core repulsion = 12715.203263 eV Total energy + Delta-G solvation = -2976.765225 eV No. of doubly occupied orbitals = 43 Molecular weight (most abundant/longest-lived isotopes) = 316.956 amu Computer time = 0.22 seconds Orbital eigenvalues (eV) -40.03183 -38.14625 -36.65388 -34.37787 -32.63464 -32.09131 -31.40969 -29.16715 -27.30036 -24.22865 -22.94081 -21.94332 -20.03598 -18.30672 -16.51405 -16.14576 -15.69424 -15.13828 -14.89125 -14.72310 -14.16751 -14.11904 -13.59971 -12.98627 -12.24715 -12.19694 -12.05205 -11.73906 -11.71092 -11.28954 -11.02684 -10.93547 -10.57498 -10.53204 -10.19212 -9.41120 -9.33935 -8.80332 -8.70969 -8.53818 -7.93765 -6.19582 -4.26726 0.51793 0.78739 1.61858 1.87387 2.88748 3.22202 3.29456 3.32284 3.82662 3.84069 4.31727 4.41547 4.57579 4.89784 5.04605 5.16984 5.26505 5.48868 5.54964 5.79317 5.91277 6.24184 7.24282 7.31459 7.47127 7.60741 7.92335 8.50285 8.70860 8.95655 9.39708 10.90534 Molecular weight = 316.96amu Principal moments of inertia in cm(-1) A = 0.013059 B = 0.004854 C = 0.003545 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2143.582909 B = 5767.582983 C = 7896.021117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.884 5.884 2 C 0.065 3.935 3 Si 0.903 3.097 4 H -0.272 1.272 5 H -0.282 1.282 6 H -0.282 1.282 7 C -0.545 4.545 8 H 0.064 0.936 9 C 0.250 3.750 10 N -0.701 5.701 11 C 0.528 3.472 12 O -0.516 6.516 13 C -0.085 4.085 14 C -0.075 4.075 15 C -0.031 4.031 16 Cl -0.061 7.061 17 C -0.092 4.092 18 C -0.089 4.089 19 C -0.047 4.047 20 Br -0.002 7.002 21 H 0.266 0.734 22 H 0.031 0.969 23 H 0.031 0.969 24 H 0.388 0.612 25 H 0.147 0.853 26 H 0.144 0.856 27 H 0.146 0.854 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.167 -18.496 -0.002 20.643 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.521 5.521 2 C -0.139 4.139 3 Si 0.731 3.269 4 H -0.196 1.196 5 H -0.208 1.208 6 H -0.208 1.208 7 C -0.583 4.583 8 H 0.082 0.918 9 C 0.130 3.870 10 N -0.350 5.350 11 C 0.311 3.689 12 O -0.393 6.393 13 C -0.090 4.090 14 C -0.096 4.096 15 C -0.058 4.058 16 Cl -0.032 7.032 17 C -0.112 4.112 18 C -0.109 4.109 19 C -0.129 4.129 20 Br 0.085 6.915 21 H 0.075 0.925 22 H 0.049 0.951 23 H 0.049 0.951 24 H 0.222 0.778 25 H 0.165 0.835 26 H 0.161 0.839 27 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 7.546 -18.578 -0.002 20.052 hybrid contribution 1.567 1.176 -0.001 1.959 sum 9.113 -17.402 -0.003 19.644 Atomic orbital electron populations 1.69981 1.06088 1.27258 1.48791 1.24938 0.94914 0.99445 0.94624 0.86363 0.79854 0.82943 0.77786 1.19603 1.20771 1.20764 1.21238 0.93306 0.90367 1.53377 0.91831 1.19184 0.88159 0.81561 0.98079 1.46475 1.11275 1.05795 1.71452 1.18019 0.88110 0.83221 0.79558 1.90935 1.15147 1.83721 1.49521 1.20128 0.93520 0.94060 1.01331 1.21302 0.91071 0.99560 0.97636 1.20889 0.85477 0.94627 1.04840 1.98390 1.11834 1.96104 1.96833 1.21168 0.95596 0.95285 0.99117 1.21059 0.91607 0.98859 0.99382 1.22135 0.93619 0.94321 1.02810 1.96805 1.03939 1.94019 1.96712 0.92450 0.95130 0.95119 0.77784 0.83517 0.83868 0.83641 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.88 -25.71 13.29 55.43 0.74 -24.97 15 2 C 0.06 1.77 5.46 -17.82 -0.10 1.67 15 3 Si 0.90 20.64 29.54 -169.99 -5.02 15.62 15 4 H -0.27 -6.00 7.11 56.52 0.40 -5.60 15 5 H -0.28 -6.41 7.11 56.52 0.40 -6.01 15 6 H -0.28 -6.41 7.11 56.52 0.40 -6.01 15 7 C -0.54 -14.52 9.28 -34.44 -0.32 -14.84 15 8 H 0.06 1.59 7.60 -52.49 -0.40 1.19 15 9 C 0.25 6.49 5.43 -5.19 -0.03 6.46 15 10 N -0.70 -14.57 5.50 -62.44 -0.34 -14.91 15 11 C 0.53 10.53 7.76 -12.35 -0.10 10.44 15 12 O -0.52 -11.80 13.47 5.31 0.07 -11.72 15 13 C -0.08 -1.33 5.88 -104.95 -0.62 -1.95 15 14 C -0.08 -0.98 9.32 -39.15 -0.36 -1.35 15 15 C -0.03 -0.34 6.31 -39.56 -0.25 -0.59 15 16 Cl -0.06 -0.61 28.95 -51.86 -1.50 -2.11 15 17 C -0.09 -0.87 9.82 -39.47 -0.39 -1.26 15 18 C -0.09 -0.93 9.77 -39.61 -0.39 -1.32 15 19 C -0.05 -0.67 6.26 -39.10 -0.24 -0.92 15 20 Br 0.00 -0.03 30.39 -68.01 -2.07 -2.09 15 21 H 0.27 7.24 8.31 -40.82 -0.34 6.90 15 22 H 0.03 0.87 8.14 -51.93 -0.42 0.45 15 23 H 0.03 0.88 8.14 -51.93 -0.42 0.46 15 24 H 0.39 6.93 6.35 -40.82 -0.26 6.67 15 25 H 0.15 1.76 6.41 -52.49 -0.34 1.43 15 26 H 0.14 0.95 8.06 -52.49 -0.42 0.53 15 27 H 0.15 1.14 8.06 -52.49 -0.42 0.71 15 LS Contribution 278.81 15.07 4.20 4.20 Total: -1.00 -30.39 278.81 -8.53 -38.92 By element: Atomic # 1 Polarization: 2.54 SS G_CDS: -1.82 Total: 0.72 kcal Atomic # 6 Polarization: -0.86 SS G_CDS: -2.79 Total: -3.65 kcal Atomic # 7 Polarization: -40.28 SS G_CDS: 0.39 Total: -39.88 kcal Atomic # 8 Polarization: -11.80 SS G_CDS: 0.07 Total: -11.72 kcal Atomic # 14 Polarization: 20.64 SS G_CDS: -5.02 Total: 15.62 kcal Atomic # 17 Polarization: -0.61 SS G_CDS: -1.50 Total: -2.11 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -2.07 Total: -2.09 kcal Total LS contribution 4.20 Total: 4.20 kcal Total: -30.39 -8.53 -38.92 kcal The number of atoms in the molecule is 27 The average number of expansion shells was 15.00 The maximum number of expansion shells was 15 The minimum number of expansion shells was 15 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000220947655.mol2 27 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 30.579 kcal (2) G-P(sol) polarization free energy of solvation -30.387 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.192 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.535 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.921 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.342 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.22 seconds