Wall clock time and date at job start Tue Mar 31 2020 11:25:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 H 1.08993 * 109.47037 * 2 1 4 4 C 1.50697 * 109.46969 * 120.00347 * 2 1 3 5 5 O 1.21283 * 120.00521 * 119.72525 * 4 2 1 6 6 N 1.34784 * 119.99774 * 299.99631 * 4 2 1 7 7 C 1.46499 * 119.99893 * 179.72962 * 6 4 2 8 8 C 1.50699 * 109.46700 * 180.02562 * 7 6 4 9 9 H 1.08002 * 120.00629 * 359.97438 * 8 7 6 10 10 C 1.37878 * 119.99714 * 180.02562 * 8 7 6 11 11 N 1.31520 * 120.00194 * 180.02562 * 10 8 7 12 12 Si 1.86799 * 120.00298 * 359.97438 * 10 8 7 13 13 H 1.48500 * 109.46756 * 90.00237 * 12 10 8 14 14 H 1.48496 * 109.47426 * 210.00339 * 12 10 8 15 15 H 1.48507 * 109.47018 * 330.00525 * 12 10 8 16 16 C 1.50700 * 109.47038 * 239.99584 * 2 1 3 17 17 C 1.33368 * 125.19070 * 120.00161 * 16 2 1 18 18 C 1.38448 * 114.93044 * 179.97438 * 17 16 2 19 19 C 1.33484 * 114.89336 * 0.02562 * 18 17 16 20 20 Br 1.89099 * 125.20774 * 179.97438 * 19 18 17 21 21 S 1.75877 * 109.58231 * 359.73442 * 19 18 17 22 22 H 1.09001 * 109.47339 * 180.02562 * 1 2 3 23 23 H 1.08996 * 109.47277 * 299.99945 * 1 2 3 24 24 H 1.09003 * 109.47126 * 59.99926 * 1 2 3 25 25 H 0.97005 * 119.99846 * 359.72750 * 6 4 2 26 26 H 1.08998 * 109.47134 * 299.99552 * 7 6 4 27 27 H 1.08994 * 109.47397 * 59.99843 * 7 6 4 28 28 H 0.96996 * 120.00207 * 180.02562 * 11 10 8 29 29 H 1.08000 * 122.53086 * 0.02562 * 17 16 2 30 30 H 1.08000 * 122.55932 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0323 -0.7105 1.2304 5 8 2.7254 -1.6995 1.1192 6 7 1.7067 -0.2500 2.4546 7 6 2.1901 -0.9441 3.6507 8 6 1.6883 -0.2332 4.8811 9 1 1.0714 0.6477 4.7821 10 6 2.0176 -0.7069 6.1334 11 7 1.5793 -0.0869 7.2073 12 14 3.0851 -2.2302 6.3049 13 1 4.5144 -1.8300 6.3529 14 1 2.7292 -2.9458 7.5564 15 1 2.8606 -3.1255 5.1416 16 6 2.0323 -0.7105 -1.2304 17 6 2.8023 -0.1646 -2.1726 18 6 3.1406 -1.0126 -3.2135 19 6 2.6441 -2.2478 -3.1159 20 35 2.9209 -3.6362 -4.3695 21 16 1.6987 -2.3882 -1.6395 22 1 -0.3634 -1.0277 0.0005 23 1 -0.3633 0.5138 0.8899 24 1 -0.3633 0.5139 -0.8900 25 1 1.1523 0.5411 2.5436 26 1 1.8222 -1.9701 3.6490 27 1 3.2800 -0.9489 3.6525 28 1 1.8113 -0.4199 8.0882 29 1 3.1373 0.8611 -2.1267 30 1 3.7591 -0.6987 -4.0413 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000331207092.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:25:17 Heat of formation + Delta-G solvation = -11.272192 kcal Electronic energy + Delta-G solvation = -15958.541055 eV Core-core repulsion = 13119.525588 eV Total energy + Delta-G solvation = -2839.015467 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 316.983 amu Computer time = 0.21 seconds Orbital eigenvalues (eV) -39.50923 -37.79275 -34.40670 -34.02758 -32.37374 -31.51304 -28.29086 -27.64075 -24.66210 -23.38706 -21.82889 -19.93680 -19.37549 -17.76402 -16.77146 -16.01430 -15.80617 -15.13198 -14.77556 -14.24097 -13.70648 -13.47245 -13.17555 -12.99565 -12.68713 -12.45151 -12.35421 -12.05726 -11.84907 -11.56874 -11.06169 -10.91024 -10.82493 -10.75549 -10.40329 -10.00777 -9.54561 -9.33709 -8.82229 -8.59619 -8.42952 -8.22242 -6.25379 -4.28110 0.71928 1.02623 1.73557 1.92130 2.52740 3.08903 3.24289 3.31172 3.39265 3.88110 4.30056 4.44387 4.94045 5.03861 5.10106 5.18434 5.30007 5.39948 5.60451 5.69319 5.84991 5.97187 6.07828 6.26290 6.74908 7.01603 7.12984 7.33134 8.05852 8.43354 8.68794 8.82263 9.34421 10.86464 Molecular weight = 316.98amu Principal moments of inertia in cm(-1) A = 0.029029 B = 0.003149 C = 0.002942 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 964.331034 B = 8890.687599 C = 9514.528348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.048 4.048 3 H 0.115 0.885 4 C 0.500 3.500 5 O -0.545 6.545 6 N -0.700 5.700 7 C 0.221 3.779 8 C -0.545 4.545 9 H 0.080 0.920 10 C 0.078 3.922 11 N -0.892 5.892 12 Si 0.876 3.124 13 H -0.273 1.273 14 H -0.283 1.283 15 H -0.261 1.261 16 C -0.133 4.133 17 C -0.146 4.146 18 C -0.090 4.090 19 C -0.224 4.224 20 Br -0.004 7.004 21 S 0.208 5.792 22 H 0.062 0.938 23 H 0.075 0.925 24 H 0.070 0.930 25 H 0.397 0.603 26 H 0.026 0.974 27 H 0.021 0.979 28 H 0.268 0.732 29 H 0.145 0.855 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.466 -1.826 -24.379 24.452 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.071 4.071 3 H 0.133 0.867 4 C 0.283 3.717 5 O -0.423 6.423 6 N -0.348 5.348 7 C 0.099 3.901 8 C -0.583 4.583 9 H 0.098 0.902 10 C -0.126 4.126 11 N -0.529 5.529 12 Si 0.702 3.298 13 H -0.198 1.198 14 H -0.208 1.208 15 H -0.185 1.185 16 C -0.253 4.253 17 C -0.177 4.177 18 C -0.124 4.124 19 C -0.421 4.421 20 Br 0.080 6.920 21 S 0.473 5.527 22 H 0.081 0.919 23 H 0.094 0.906 24 H 0.089 0.911 25 H 0.231 0.769 26 H 0.044 0.956 27 H 0.039 0.961 28 H 0.078 0.922 29 H 0.163 0.837 30 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -0.698 -4.266 -23.988 24.375 hybrid contribution 1.184 1.153 -0.046 1.654 sum 0.486 -3.113 -24.035 24.240 Atomic orbital electron populations 1.21860 0.91602 1.03275 1.03442 1.19957 0.97766 1.00113 0.89314 0.86717 1.20267 0.81370 0.85248 0.84773 1.90702 1.38591 1.26342 1.86679 1.46146 1.51935 1.31116 1.05650 1.19517 0.94944 0.93361 0.82325 1.21074 1.34211 1.14146 0.88840 0.90214 1.24790 0.95374 0.96927 0.95463 1.69876 1.44755 1.40152 0.98080 0.86829 0.81137 0.83512 0.78294 1.19825 1.20842 1.18498 1.24235 1.03775 0.97557 0.99730 1.19955 1.01378 1.01751 0.94604 1.20055 1.00805 0.91318 1.00235 1.26153 1.14280 0.98571 1.03107 1.96655 1.96131 1.45305 1.53913 1.84485 1.47821 1.08938 1.11440 0.91892 0.90623 0.91096 0.76898 0.95612 0.96086 0.92209 0.83688 0.83849 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.54 9.01 37.16 0.33 -1.21 16 2 C -0.05 -0.62 3.10 -92.93 -0.29 -0.91 16 3 H 0.11 1.21 8.08 -51.93 -0.42 0.79 16 4 C 0.50 9.04 7.12 -10.98 -0.08 8.96 16 5 O -0.54 -11.89 15.23 5.56 0.08 -11.80 16 6 N -0.70 -13.50 5.44 -61.48 -0.33 -13.83 16 7 C 0.22 5.29 4.50 -5.19 -0.02 5.27 16 8 C -0.54 -14.62 9.83 -34.44 -0.34 -14.96 16 9 H 0.08 2.21 7.84 -52.49 -0.41 1.80 16 10 C 0.08 2.19 5.47 -17.82 -0.10 2.09 16 11 N -0.89 -26.13 13.96 55.43 0.77 -25.36 16 12 Si 0.88 21.23 27.47 -169.99 -4.67 16.56 16 13 H -0.27 -6.53 7.11 56.52 0.40 -6.13 16 14 H -0.28 -6.72 7.11 56.52 0.40 -6.32 16 15 H -0.26 -6.29 6.54 56.52 0.37 -5.92 16 16 C -0.13 -1.77 4.61 -36.01 -0.17 -1.94 16 17 C -0.15 -1.70 10.01 -41.21 -0.41 -2.11 16 18 C -0.09 -1.02 10.11 -41.17 -0.42 -1.44 16 19 C -0.22 -2.82 6.97 29.07 0.20 -2.61 16 20 Br 0.00 -0.04 34.07 -68.01 -2.32 -2.36 16 21 S 0.21 2.89 22.16 -107.50 -2.38 0.51 16 22 H 0.06 0.73 8.01 -51.93 -0.42 0.31 16 23 H 0.07 0.76 7.57 -51.93 -0.39 0.36 16 24 H 0.07 0.61 8.14 -51.93 -0.42 0.19 16 25 H 0.40 6.62 7.75 -40.82 -0.32 6.30 16 26 H 0.03 0.66 7.20 -51.93 -0.37 0.28 16 27 H 0.02 0.53 7.57 -51.93 -0.39 0.14 16 28 H 0.27 7.36 8.31 -40.82 -0.34 7.02 16 29 H 0.15 1.33 8.06 -52.49 -0.42 0.91 16 30 H 0.14 1.31 8.06 -52.49 -0.42 0.89 16 LS Contribution 296.40 15.07 4.47 4.47 Total: -1.00 -31.23 296.40 -8.82 -40.05 By element: Atomic # 1 Polarization: 3.77 SS G_CDS: -3.16 Total: 0.62 kcal Atomic # 6 Polarization: -7.58 SS G_CDS: -1.28 Total: -8.86 kcal Atomic # 7 Polarization: -39.63 SS G_CDS: 0.44 Total: -39.19 kcal Atomic # 8 Polarization: -11.89 SS G_CDS: 0.08 Total: -11.80 kcal Atomic # 14 Polarization: 21.23 SS G_CDS: -4.67 Total: 16.56 kcal Atomic # 16 Polarization: 2.89 SS G_CDS: -2.38 Total: 0.51 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.32 Total: -2.36 kcal Total LS contribution 4.47 Total: 4.47 kcal Total: -31.23 -8.82 -40.05 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000331207092.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 28.779 kcal (2) G-P(sol) polarization free energy of solvation -31.232 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.453 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.820 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.051 kcal (6) G-S(sol) free energy of system = (1) + (5) -11.272 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.21 seconds