Wall clock time and date at job start Tue Mar 31 2020 11:11:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.33780 * 124.50438 * 2 1 4 4 C 1.37578 * 115.09904 * 179.72927 * 3 2 1 5 5 Br 1.89096 * 123.37487 * 180.33023 * 4 3 2 6 6 C 1.36754 * 113.24950 * 0.49089 * 4 3 2 7 7 C 1.46477 * 125.45889 * 179.79813 * 6 4 3 8 8 O 1.21712 * 120.00243 * 359.72536 * 7 6 4 9 9 N 1.34783 * 120.00160 * 179.72004 * 7 6 4 10 10 C 1.46494 * 120.00384 * 179.72909 * 9 7 6 11 11 H 1.09004 * 109.46687 * 35.27357 * 10 9 7 12 12 C 1.52998 * 109.46982 * 275.27567 * 10 9 7 13 13 C 1.50690 * 109.47448 * 155.27429 * 10 9 7 14 14 H 1.08010 * 120.00077 * 35.00619 * 13 10 9 15 15 C 1.37875 * 120.00575 * 214.99957 * 13 10 9 16 16 N 1.31507 * 120.00838 * 184.91339 * 15 13 10 17 17 Si 1.86802 * 119.99561 * 4.92029 * 15 13 10 18 18 H 1.48497 * 109.47562 * 84.83087 * 17 15 13 19 19 H 1.48500 * 109.47279 * 204.83188 * 17 15 13 20 20 H 1.48498 * 109.47101 * 324.82952 * 17 15 13 21 21 S 1.70610 * 124.50780 * 180.02562 * 2 1 3 22 22 H 1.09000 * 109.46782 * 180.02562 * 1 2 3 23 23 H 1.08999 * 109.46790 * 300.02454 * 1 2 3 24 24 H 1.08999 * 109.47123 * 60.02111 * 1 2 3 25 25 H 1.08004 * 122.44921 * 0.02562 * 3 2 1 26 26 H 0.97000 * 119.99420 * 0.02562 * 9 7 6 27 27 H 1.09010 * 109.47030 * 55.03496 * 12 10 9 28 28 H 1.09003 * 109.47583 * 175.03207 * 12 10 9 29 29 H 1.08995 * 109.47327 * 295.03794 * 12 10 9 30 30 H 0.97002 * 120.01001 * 180.02562 * 16 15 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2649 1.1025 0.0000 4 6 3.6221 0.8776 0.0059 5 35 4.9064 2.2655 0.0163 6 6 3.9494 -0.4502 -0.0001 7 6 5.3112 -0.9897 -0.0002 8 8 6.2652 -0.2339 0.0003 9 7 5.5078 -2.3231 -0.0007 10 6 6.8697 -2.8627 -0.0068 11 1 7.5192 -2.2163 0.5835 12 6 7.3860 -2.9277 -1.4455 13 6 6.8641 -4.2473 0.5879 14 1 6.0207 -4.9019 0.4244 15 6 7.9357 -4.6787 1.3407 16 7 7.9753 -5.9181 1.7785 17 14 9.3312 -3.5025 1.7388 18 1 8.9814 -2.7093 2.9445 19 1 10.5720 -4.2761 1.9981 20 1 9.5497 -2.5869 0.5903 21 16 2.4736 -1.4059 -0.0006 22 1 -0.3633 -1.0277 0.0005 23 1 -0.3633 0.5142 0.8898 24 1 -0.3633 0.5135 -0.8902 25 1 1.8420 2.0963 0.0004 26 1 4.7474 -2.9254 -0.0013 27 1 7.3075 -1.9421 -1.9046 28 1 8.4287 -3.2454 -1.4435 29 1 6.7898 -3.6417 -2.0137 30 1 8.7290 -6.2216 2.3084 RHF calculation, no. of doubly occupied orbitals= 44 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000334576354.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:11:00 Heat of formation + Delta-G solvation = -7.614957 kcal Electronic energy + Delta-G solvation = -16261.570197 eV Core-core repulsion = 13422.713320 eV Total energy + Delta-G solvation = -2838.856877 eV No. of doubly occupied orbitals = 44 Molecular weight (most abundant/longest-lived isotopes) = 316.983 amu Computer time = 0.23 seconds Orbital eigenvalues (eV) -39.27647 -37.81605 -34.90418 -32.62862 -32.35114 -30.46876 -29.71229 -27.18643 -25.32549 -23.25827 -21.98691 -19.88906 -19.14531 -17.98977 -16.81170 -16.05540 -15.27707 -14.82889 -14.73054 -13.97111 -13.91002 -13.36793 -13.11071 -12.84367 -12.58816 -12.50425 -12.31352 -11.96846 -11.47428 -11.11704 -11.11043 -10.82760 -10.61987 -10.57317 -10.17865 -9.87604 -9.23490 -9.04928 -8.76883 -8.71932 -8.49874 -8.12318 -6.25340 -4.29636 0.39343 1.09941 1.59469 2.15881 2.20857 3.26243 3.34225 3.41728 3.62860 3.83197 4.31590 4.57144 4.98145 5.05715 5.11132 5.23296 5.28995 5.57018 5.71953 5.84520 5.99839 6.32699 6.50885 6.65754 6.90597 7.14946 7.32972 7.49011 8.06628 8.48418 8.73368 8.83748 9.36166 10.86156 Molecular weight = 316.98amu Principal moments of inertia in cm(-1) A = 0.017592 B = 0.005204 C = 0.004262 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1591.266372 B = 5379.464879 C = 6567.762876 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 C -0.207 4.207 3 C -0.134 4.134 4 C -0.047 4.047 5 Br -0.001 7.001 6 C -0.225 4.225 7 C 0.564 3.436 8 O -0.520 6.520 9 N -0.696 5.696 10 C 0.233 3.767 11 H 0.053 0.947 12 C -0.148 4.148 13 C -0.532 4.532 14 H 0.079 0.921 15 C 0.083 3.917 16 N -0.887 5.887 17 Si 0.873 3.127 18 H -0.272 1.272 19 H -0.285 1.285 20 H -0.259 1.259 21 S 0.245 5.755 22 H 0.070 0.930 23 H 0.079 0.921 24 H 0.079 0.921 25 H 0.148 0.852 26 H 0.389 0.611 27 H 0.030 0.970 28 H 0.054 0.946 29 H 0.047 0.953 30 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.796 13.936 -4.106 20.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C -0.327 4.327 3 C -0.165 4.165 4 C -0.142 4.142 5 Br 0.084 6.916 6 C -0.349 4.349 7 C 0.348 3.652 8 O -0.399 6.399 9 N -0.345 5.345 10 C 0.131 3.869 11 H 0.071 0.929 12 C -0.207 4.207 13 C -0.570 4.570 14 H 0.097 0.903 15 C -0.122 4.122 16 N -0.523 5.523 17 Si 0.699 3.301 18 H -0.198 1.198 19 H -0.211 1.211 20 H -0.184 1.184 21 S 0.512 5.488 22 H 0.089 0.911 23 H 0.098 0.902 24 H 0.098 0.902 25 H 0.166 0.834 26 H 0.223 0.777 27 H 0.050 0.950 28 H 0.073 0.927 29 H 0.066 0.934 30 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges -13.804 13.253 -3.990 19.547 hybrid contribution 0.336 1.449 0.320 1.522 sum -13.467 14.702 -3.671 20.273 Atomic orbital electron populations 1.20360 0.87029 1.03252 1.03344 1.24157 1.01710 0.97904 1.08968 1.19649 0.90553 1.00218 1.06118 1.21208 0.94170 0.92503 1.06282 1.96720 1.55092 1.42707 1.97121 1.24959 0.99263 0.96476 1.14230 1.16989 0.85938 0.83752 0.78565 1.90866 1.40954 1.57718 1.50351 1.46619 1.11436 1.04457 1.71971 1.19185 0.78971 0.94802 0.93955 0.92890 1.22223 1.00931 0.98943 0.98589 1.20982 1.06394 0.96661 1.32924 0.90282 1.24919 0.97904 0.95058 0.94272 1.69871 1.31524 1.15657 1.35281 0.86912 0.81709 0.81329 0.80124 1.19756 1.21130 1.18358 1.83210 0.92870 1.06339 1.66407 0.91082 0.90224 0.90246 0.83415 0.77748 0.95049 0.92724 0.93365 0.92176 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.57 10.33 36.01 0.37 -0.20 16 2 C -0.21 -2.21 6.28 -35.87 -0.23 -2.43 16 3 C -0.13 -1.60 9.88 -41.39 -0.41 -2.01 16 4 C -0.05 -0.71 6.29 -40.36 -0.25 -0.97 16 5 Br 0.00 -0.02 31.69 -68.01 -2.16 -2.17 16 6 C -0.23 -3.73 6.45 -36.80 -0.24 -3.97 16 7 C 0.56 11.49 7.74 -12.94 -0.10 11.39 16 8 O -0.52 -12.01 14.38 5.18 0.07 -11.93 16 9 N -0.70 -14.48 5.07 -56.31 -0.29 -14.76 16 10 C 0.23 5.57 2.22 -69.09 -0.15 5.42 16 11 H 0.05 1.38 4.73 -51.93 -0.25 1.13 16 12 C -0.15 -3.26 9.46 37.16 0.35 -2.91 16 13 C -0.53 -14.23 9.05 -34.45 -0.31 -14.54 16 14 H 0.08 2.22 8.06 -52.48 -0.42 1.80 16 15 C 0.08 2.32 5.47 -17.82 -0.10 2.22 16 16 N -0.89 -25.93 13.96 55.43 0.77 -25.16 16 17 Si 0.87 21.55 26.99 -169.99 -4.59 16.96 16 18 H -0.27 -6.76 7.11 56.52 0.40 -6.36 16 19 H -0.29 -6.89 7.11 56.52 0.40 -6.49 16 20 H -0.26 -6.30 6.82 56.52 0.39 -5.92 16 21 S 0.24 3.02 22.08 -107.50 -2.37 0.65 16 22 H 0.07 0.43 8.11 -51.93 -0.42 0.01 16 23 H 0.08 0.47 8.14 -51.93 -0.42 0.05 16 24 H 0.08 0.46 8.14 -51.93 -0.42 0.04 16 25 H 0.15 1.44 8.06 -52.48 -0.42 1.01 16 26 H 0.39 7.22 7.70 -40.82 -0.31 6.90 16 27 H 0.03 0.66 8.14 -51.92 -0.42 0.23 16 28 H 0.05 1.20 8.14 -51.93 -0.42 0.78 16 29 H 0.05 0.99 8.14 -51.93 -0.42 0.57 16 30 H 0.27 7.38 8.31 -40.82 -0.34 7.04 16 LS Contribution 294.04 15.07 4.43 4.43 Total: -1.00 -30.91 294.04 -8.28 -39.19 By element: Atomic # 1 Polarization: 3.89 SS G_CDS: -3.09 Total: 0.80 kcal Atomic # 6 Polarization: -6.93 SS G_CDS: -1.06 Total: -8.00 kcal Atomic # 7 Polarization: -40.41 SS G_CDS: 0.49 Total: -39.92 kcal Atomic # 8 Polarization: -12.01 SS G_CDS: 0.07 Total: -11.93 kcal Atomic # 14 Polarization: 21.55 SS G_CDS: -4.59 Total: 16.96 kcal Atomic # 16 Polarization: 3.02 SS G_CDS: -2.37 Total: 0.65 kcal Atomic # 35 Polarization: -0.02 SS G_CDS: -2.16 Total: -2.17 kcal Total LS contribution 4.43 Total: 4.43 kcal Total: -30.91 -8.28 -39.19 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000334576354.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 31.574 kcal (2) G-P(sol) polarization free energy of solvation -30.910 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 0.664 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.279 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.189 kcal (6) G-S(sol) free energy of system = (1) + (5) -7.615 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.23 seconds