Wall clock time and date at job start Tue Mar 31 2020 12:03:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.17404 * 1 3 3 C 1.47200 * 179.97438 * 2 1 4 4 N 1.46498 * 109.47149 * 297.53682 * 3 2 1 5 5 C 1.36918 * 120.00496 * 264.71323 * 4 3 2 6 6 H 1.08000 * 120.00515 * 126.79819 * 5 4 3 7 7 C 1.38950 * 119.99776 * 306.79359 * 5 4 3 8 8 N 1.31434 * 120.00189 * 4.23534 * 7 5 4 9 9 Si 1.86803 * 120.00124 * 184.23050 * 7 5 4 10 10 H 1.48503 * 109.47012 * 89.99960 * 9 7 5 11 11 H 1.48489 * 109.47440 * 210.00446 * 9 7 5 12 12 H 1.48507 * 109.46961 * 330.00421 * 9 7 5 13 13 C 1.34780 * 119.99488 * 84.71455 * 4 3 2 14 14 O 1.21851 * 120.00069 * 3.85683 * 13 4 3 15 15 C 1.41308 * 119.99770 * 183.85322 * 13 4 3 16 16 S 1.75815 * 125.49716 * 352.73335 * 15 13 4 17 17 C 1.70558 * 91.71201 * 180.02562 * 16 15 13 18 18 C 1.33482 * 111.27452 * 359.97438 * 17 16 15 19 19 C 1.37763 * 125.49685 * 172.75193 * 15 13 4 20 20 S 1.76201 * 123.54668 * 0.02562 * 19 15 13 21 21 C 1.81402 * 102.99954 * 179.97438 * 20 19 15 22 22 F 1.39891 * 109.47160 * 299.99958 * 21 20 19 23 23 F 1.39899 * 109.46804 * 60.00097 * 21 20 19 24 24 H 4.40636 * 5.51448 * 179.97438 * 4 1 2 25 25 H 1.09006 * 109.46996 * 177.54249 * 3 2 1 26 26 H 1.09001 * 109.47028 * 57.54449 * 3 2 1 27 27 H 0.97003 * 120.00324 * 179.97438 * 8 7 5 28 28 H 1.08001 * 124.35671 * 179.73283 * 17 16 15 29 29 H 1.08004 * 122.44521 * 179.97438 * 18 17 16 30 30 H 1.09000 * 109.47023 * 179.97438 * 21 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.1740 0.0000 0.0000 3 6 2.6460 0.0007 0.0000 4 7 3.1347 -0.6377 1.2247 5 6 3.4656 0.1278 2.3107 6 1 3.0306 -0.0871 3.2756 7 6 4.3611 1.1810 2.1713 8 7 4.8264 1.4951 0.9829 9 14 4.9036 2.1507 3.6730 10 1 6.1166 1.5229 4.2559 11 1 5.2116 3.5478 3.2753 12 1 3.8136 2.1520 4.6816 13 6 3.2585 -1.9785 1.2824 14 8 3.0315 -2.6545 0.2943 15 6 3.6517 -2.6005 2.4888 16 16 4.1868 -1.7655 3.9406 17 6 4.4156 -3.2404 4.7662 18 6 4.1062 -4.2822 3.9912 19 6 3.6778 -3.9588 2.7170 20 16 3.2150 -5.1578 1.5117 21 6 3.4567 -6.7291 2.3853 22 9 4.7957 -6.8458 2.7731 23 9 2.6380 -6.7628 3.5192 24 1 -1.0499 0.0001 0.0003 25 1 3.0089 1.0276 -0.0441 26 1 3.0096 -0.5507 -0.8672 27 1 5.4513 2.2306 0.8856 28 1 4.7692 -3.3209 5.7835 29 1 4.1858 -5.3033 4.3341 30 1 3.1960 -7.5559 1.7246 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000491020993.mol2 30 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:03:54 Heat of formation + Delta-G solvation = -27.812031 kcal Electronic energy + Delta-G solvation = -21694.708166 eV Core-core repulsion = 17960.359355 eV Total energy + Delta-G solvation = -3734.348812 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 317.010 amu Computer time = 1.94 seconds Orbital eigenvalues (eV) -49.01679 -47.06010 -39.07161 -36.89272 -35.10392 -32.73628 -31.58412 -29.49927 -26.85682 -26.74094 -25.46961 -23.83371 -20.62073 -19.38903 -18.63224 -17.92685 -17.53960 -17.49177 -17.27766 -16.25437 -15.39096 -15.19636 -14.67965 -14.30129 -14.20413 -13.97107 -13.78327 -13.41125 -13.11841 -13.08776 -12.71527 -12.23763 -12.02034 -12.01185 -11.76025 -11.60577 -11.39228 -11.06140 -10.61288 -10.17886 -10.02982 -9.79191 -9.43464 -9.20530 -9.03409 -8.74557 -8.05934 -7.78762 -7.05533 -6.76093 -4.68213 1.13495 1.16492 2.02765 2.64989 2.81980 2.90539 3.01093 3.03566 3.05331 3.42527 3.66340 3.81927 3.88569 4.19681 4.51287 4.60915 4.63303 4.79122 5.29036 5.48825 5.72954 6.02740 6.32667 6.52307 6.67401 6.68320 6.70752 6.87857 7.04769 7.67947 7.93948 8.39630 8.62690 9.09762 9.56292 10.23178 Molecular weight = 317.01amu Principal moments of inertia in cm(-1) A = 0.015872 B = 0.005757 C = 0.004630 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1763.679477 B = 4862.447614 C = 6045.648850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.252 4.252 2 C -0.157 4.157 3 C 0.215 3.785 4 N -0.434 5.434 5 C -0.348 4.348 6 H 0.101 0.899 7 C 0.069 3.931 8 N -0.840 5.840 9 Si 0.904 3.096 10 H -0.262 1.262 11 H -0.273 1.273 12 H -0.257 1.257 13 C 0.547 3.453 14 O -0.571 6.571 15 C -0.204 4.204 16 S 0.329 5.671 17 C -0.311 4.311 18 C -0.149 4.149 19 C -0.087 4.087 20 S 0.013 5.987 21 C 0.227 3.773 22 F -0.191 7.191 23 F -0.192 7.192 24 H 0.207 0.793 25 H 0.128 0.872 26 H 0.084 0.916 27 H 0.281 0.719 28 H 0.153 0.847 29 H 0.125 0.875 30 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.944 -6.454 4.434 7.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.271 4.271 2 C -0.158 4.158 3 C 0.093 3.907 4 N -0.152 5.152 5 C -0.483 4.483 6 H 0.117 0.883 7 C -0.143 4.143 8 N -0.472 5.472 9 Si 0.727 3.273 10 H -0.186 1.186 11 H -0.198 1.198 12 H -0.181 1.181 13 C 0.338 3.662 14 O -0.457 6.457 15 C -0.333 4.333 16 S 0.604 5.396 17 C -0.449 4.449 18 C -0.183 4.183 19 C -0.216 4.216 20 S 0.247 5.753 21 C 0.065 3.935 22 F -0.172 7.172 23 F -0.174 7.174 24 H 0.224 0.776 25 H 0.146 0.854 26 H 0.102 0.898 27 H 0.092 0.908 28 H 0.170 0.830 29 H 0.143 0.857 30 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges -1.021 -5.149 3.248 6.173 hybrid contribution 0.405 -1.233 1.865 2.272 sum -0.616 -6.383 5.113 8.201 Atomic orbital electron populations 1.24613 0.95652 1.04344 1.02488 1.24371 0.95500 0.97512 0.98419 1.18545 0.81380 1.02005 0.88782 1.43095 1.55973 1.03365 1.12784 1.19320 1.26038 1.14251 0.88649 0.88265 1.25706 0.93778 0.97000 0.97854 1.69713 1.27611 1.27419 1.22477 0.86232 0.80435 0.79323 0.81295 1.18633 1.19791 1.18117 1.16065 0.80462 0.83265 0.86434 1.90690 1.55877 1.63248 1.35932 1.23236 1.14253 0.94602 1.01172 1.84556 1.54957 1.00712 0.99413 1.26504 1.08011 1.04792 1.05580 1.19669 1.06015 1.00216 0.92363 1.20964 1.07790 0.95208 0.97645 1.87074 1.82721 0.91275 1.14230 1.25023 0.74962 1.06096 0.87445 1.93069 1.34501 1.97210 1.92466 1.93070 1.71990 1.97633 1.54668 0.77554 0.85433 0.89818 0.90783 0.82969 0.85744 0.83896 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.25 -4.89 19.25 29.55 0.57 -4.32 16 2 C -0.16 -3.47 13.62 -37.12 -0.51 -3.97 16 3 C 0.22 5.02 5.35 -6.83 -0.04 4.99 16 4 N -0.43 -10.62 2.43 -121.27 -0.29 -10.91 16 5 C -0.35 -8.13 6.52 -15.02 -0.10 -8.23 16 6 H 0.10 2.24 5.56 -32.87 -0.18 2.06 16 7 C 0.07 1.57 5.34 -17.46 -0.09 1.48 16 8 N -0.84 -19.93 11.35 55.50 0.63 -19.30 16 9 Si 0.90 17.23 29.56 -169.99 -5.02 12.20 16 10 H -0.26 -4.87 7.11 56.52 0.40 -4.47 16 11 H -0.27 -5.17 7.11 56.52 0.40 -4.77 16 12 H -0.26 -4.74 7.11 56.52 0.40 -4.34 16 13 C 0.55 13.62 7.36 -15.09 -0.11 13.51 16 14 O -0.57 -15.00 14.45 5.05 0.07 -14.92 16 15 C -0.20 -4.60 6.15 -38.59 -0.24 -4.83 16 16 S 0.33 6.34 18.21 -107.50 -1.96 4.38 16 17 C -0.31 -5.38 10.89 29.07 0.32 -5.07 16 18 C -0.15 -2.78 8.82 -41.24 -0.36 -3.14 16 19 C -0.09 -1.81 6.14 -39.75 -0.24 -2.06 16 20 S 0.01 0.24 20.14 -107.50 -2.17 -1.92 16 21 C 0.23 3.19 5.38 101.05 0.54 3.73 16 22 F -0.19 -2.91 15.91 2.25 0.04 -2.87 16 23 F -0.19 -2.90 15.91 2.25 0.04 -2.86 16 24 H 0.21 3.05 7.80 -54.10 -0.42 2.63 16 25 H 0.13 3.02 5.94 -51.93 -0.31 2.71 16 26 H 0.08 1.98 7.53 -51.93 -0.39 1.59 16 27 H 0.28 6.21 8.31 -40.82 -0.34 5.87 16 28 H 0.15 2.16 8.06 -52.49 -0.42 1.73 16 29 H 0.12 2.16 5.42 -52.48 -0.28 1.88 16 30 H 0.14 1.38 8.14 -51.92 -0.42 0.95 16 LS Contribution 300.84 15.07 4.53 4.53 Total: -1.00 -27.77 300.84 -5.96 -33.73 By element: Atomic # 1 Polarization: 7.42 SS G_CDS: -1.57 Total: 5.85 kcal Atomic # 6 Polarization: -7.65 SS G_CDS: -0.26 Total: -7.91 kcal Atomic # 7 Polarization: -30.54 SS G_CDS: 0.34 Total: -30.21 kcal Atomic # 8 Polarization: -15.00 SS G_CDS: 0.07 Total: -14.92 kcal Atomic # 9 Polarization: -5.81 SS G_CDS: 0.07 Total: -5.74 kcal Atomic # 14 Polarization: 17.23 SS G_CDS: -5.02 Total: 12.20 kcal Atomic # 16 Polarization: 6.58 SS G_CDS: -4.12 Total: 2.46 kcal Total LS contribution 4.53 Total: 4.53 kcal Total: -27.77 -5.96 -33.73 kcal The number of atoms in the molecule is 30 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000491020993.mol2 30 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.918 kcal (2) G-P(sol) polarization free energy of solvation -27.767 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -21.849 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.730 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.94 seconds