Wall clock time and date at job start Tue Mar 31 2020 11:50:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13596 * 1 3 3 C 1.43201 * 179.97438 * 2 1 4 4 C 1.39589 * 120.45292 * 232.38416 * 3 2 1 5 5 C 1.37715 * 120.18517 * 179.97438 * 4 3 2 6 6 C 1.39820 * 121.16846 * 0.02562 * 5 4 3 7 7 C 1.48314 * 119.53596 * 179.97438 * 6 5 4 8 8 C 1.39416 * 120.10141 * 0.02562 * 7 6 5 9 9 C 1.37963 * 119.90873 * 179.97438 * 8 7 6 10 10 C 1.38453 * 120.12732 * 359.97438 * 9 8 7 11 11 Cl 1.73599 * 119.89266 * 180.02562 * 10 9 8 12 12 C 1.38540 * 120.21401 * 359.97438 * 10 9 8 13 13 Cl 1.73600 * 119.95807 * 180.02562 * 12 10 9 14 14 C 1.38117 * 120.08321 * 359.76289 * 12 10 9 15 15 C 1.38606 * 120.93054 * 359.97438 * 6 5 4 16 16 C 1.40606 * 119.73208 * 359.75391 * 15 6 5 17 17 C 1.40843 * 120.55383 * 180.27628 * 16 15 6 18 18 H 1.08003 * 120.00329 * 204.61782 * 17 16 15 19 19 C 1.40230 * 120.00041 * 24.62259 * 17 16 15 20 20 N 1.30662 * 120.00323 * 17.32417 * 19 17 16 21 21 Si 1.86799 * 120.00305 * 197.32610 * 19 17 16 22 22 H 1.48503 * 109.46883 * 359.97438 * 21 19 17 23 23 H 1.48504 * 109.47510 * 119.99629 * 21 19 17 24 24 H 1.48497 * 109.47400 * 239.99708 * 21 19 17 25 25 H 1.07994 * 119.90721 * 359.97438 * 4 3 2 26 26 H 1.07999 * 119.41278 * 179.97438 * 5 4 3 27 27 H 1.07992 * 120.04526 * 359.97426 * 8 7 6 28 28 H 1.08002 * 119.93935 * 179.97438 * 9 8 7 29 29 H 1.08007 * 120.05953 * 180.25748 * 14 12 10 30 30 H 1.08009 * 120.13483 * 180.02562 * 15 6 5 31 31 H 0.96995 * 120.00466 * 184.51518 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.5680 0.0006 0.0000 4 6 3.2751 0.7354 0.9532 5 6 4.6522 0.7317 0.9484 6 6 5.3706 -0.0003 -0.0019 7 6 6.8533 0.0219 0.0261 8 6 7.5233 0.7680 0.9947 9 6 8.9026 0.7854 1.0174 10 6 9.6222 0.0632 0.0806 11 17 11.3577 0.0889 0.1152 12 6 8.9618 -0.6808 -0.8836 13 17 9.8707 -1.5843 -2.0545 14 6 7.5812 -0.7088 -0.9110 15 6 4.7166 -0.7464 -0.9698 16 6 3.3111 -0.7746 -0.9970 17 6 2.6289 -1.5315 -1.9692 18 1 1.6218 -1.2639 -2.2533 19 6 3.2571 -2.6328 -2.5683 20 7 4.3118 -3.1662 -2.0113 21 14 2.5861 -3.3374 -4.1630 22 1 1.3934 -2.5597 -4.5846 23 1 3.6286 -3.2562 -5.2175 24 1 2.2027 -4.7568 -3.9544 25 1 2.7408 1.3084 1.6964 26 1 5.1868 1.3050 1.6914 27 1 6.9633 1.3314 1.7263 28 1 9.4221 1.3635 1.7673 29 1 7.0667 -1.2922 -1.6603 30 1 5.2844 -1.3074 -1.6975 31 1 4.7850 -3.8853 -2.4582 RHF calculation, no. of doubly occupied orbitals= 50 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC001222353057.mol2 31 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:50:46 Heat of formation + Delta-G solvation = 43.971600 kcal Electronic energy + Delta-G solvation = -19934.738804 eV Core-core repulsion = 16617.811787 eV Total energy + Delta-G solvation = -3316.927017 eV No. of doubly occupied orbitals = 50 Molecular weight (most abundant/longest-lived isotopes) = 317.007 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -39.49139 -37.72326 -36.44212 -36.38089 -35.18464 -34.25377 -31.94029 -30.97846 -29.96671 -28.40878 -25.99184 -23.60696 -22.92204 -20.96819 -20.83069 -18.08817 -17.34306 -17.06002 -15.90863 -15.52633 -15.15836 -14.46485 -13.97329 -13.95858 -13.76635 -13.50743 -12.89840 -12.79758 -12.58989 -12.06582 -11.89052 -11.81297 -11.73351 -11.67663 -11.55120 -11.33153 -11.28425 -10.95617 -10.81789 -10.78024 -10.60551 -10.16369 -9.83269 -9.61861 -8.96026 -8.72932 -7.91974 -7.43085 -7.19253 -4.84210 0.83305 1.25100 1.93226 2.14186 2.30904 2.53053 2.87869 2.93090 2.96540 3.56644 3.63089 3.83357 4.21543 4.35488 4.74243 4.98218 5.21099 5.28048 5.32419 5.40221 5.46582 5.76895 5.91078 6.07733 6.17148 6.21861 6.40472 6.59197 6.70182 6.74019 6.87515 7.04978 7.32257 7.51273 7.58866 7.72244 8.05812 8.29593 8.38764 8.73398 9.63367 Molecular weight = 317.01amu Principal moments of inertia in cm(-1) A = 0.014033 B = 0.004280 C = 0.003312 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1994.845979 B = 6540.177740 C = 8452.511870 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.507 5.507 2 C 0.298 3.702 3 C -0.182 4.182 4 C -0.027 4.027 5 C -0.235 4.235 6 C -0.029 4.029 7 C 0.004 3.996 8 C -0.104 4.104 9 C -0.099 4.099 10 C -0.048 4.048 11 Cl -0.066 7.066 12 C -0.025 4.025 13 Cl -0.060 7.060 14 C -0.095 4.095 15 C -0.135 4.135 16 C 0.147 3.853 17 C -0.424 4.424 18 H 0.088 0.912 19 C 0.076 3.924 20 N -0.762 5.762 21 Si 0.913 3.087 22 H -0.255 1.255 23 H -0.265 1.265 24 H -0.268 1.268 25 H 0.102 0.898 26 H 0.103 0.897 27 H 0.142 0.858 28 H 0.138 0.862 29 H 0.151 0.849 30 H 0.133 0.867 31 H 0.292 0.708 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.786 3.133 1.433 13.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.186 5.186 2 C -0.011 4.011 3 C -0.188 4.188 4 C -0.047 4.047 5 C -0.254 4.254 6 C -0.030 4.030 7 C 0.003 3.997 8 C -0.122 4.122 9 C -0.118 4.118 10 C -0.075 4.075 11 Cl -0.037 7.037 12 C -0.053 4.053 13 Cl -0.031 7.031 14 C -0.113 4.113 15 C -0.154 4.154 16 C 0.141 3.859 17 C -0.451 4.451 18 H 0.106 0.894 19 C -0.147 4.147 20 N -0.385 5.385 21 Si 0.735 3.265 22 H -0.178 1.178 23 H -0.189 1.189 24 H -0.193 1.193 25 H 0.120 0.880 26 H 0.121 0.879 27 H 0.159 0.841 28 H 0.155 0.845 29 H 0.168 0.832 30 H 0.150 0.850 31 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 11.402 2.802 1.338 11.817 hybrid contribution 0.540 -0.546 -0.736 1.063 sum 11.942 2.256 0.602 12.168 Atomic orbital electron populations 1.81030 1.12743 1.13230 1.11567 1.25780 0.92726 0.91194 0.91450 1.16982 0.83298 1.14699 1.03812 1.20384 0.93542 0.95590 0.95208 1.20099 0.93088 1.08587 1.03663 1.18381 0.88830 0.98554 0.97218 1.19157 0.93968 0.93628 0.92928 1.21379 0.92923 0.99109 0.98836 1.20892 0.93957 0.99063 0.97916 1.20710 0.84740 1.02972 0.99113 1.98355 1.09547 1.97686 1.98150 1.20650 0.92281 0.98627 0.93715 1.98368 1.74306 1.73257 1.57149 1.21330 0.90359 0.99540 1.00103 1.21469 0.93940 1.00414 0.99528 1.18342 0.91106 0.88151 0.88279 1.19849 1.01622 1.07588 1.16021 0.89413 1.26098 0.94390 0.95515 0.98671 1.69694 1.15065 1.18531 1.35168 0.86140 0.80601 0.79420 0.80306 1.17843 1.18917 1.19333 0.87982 0.87949 0.84067 0.84450 0.83187 0.84971 0.89612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 17. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.51 -11.84 18.54 41.84 0.78 -11.06 16 2 C 0.30 6.73 14.28 -22.47 -0.32 6.41 16 3 C -0.18 -3.94 5.95 -104.12 -0.62 -4.56 16 4 C -0.03 -0.50 9.74 -39.27 -0.38 -0.88 16 5 C -0.23 -4.16 9.37 -39.18 -0.37 -4.53 16 6 C -0.03 -0.54 5.86 -105.02 -0.62 -1.15 16 7 C 0.00 0.06 5.88 -104.90 -0.62 -0.56 16 8 C -0.10 -1.40 9.41 -39.24 -0.37 -1.77 16 9 C -0.10 -1.22 9.81 -39.60 -0.39 -1.61 16 10 C -0.05 -0.65 6.33 -39.39 -0.25 -0.90 16 11 Cl -0.07 -0.81 27.94 -51.86 -1.45 -2.25 16 12 C -0.03 -0.37 6.32 -39.51 -0.25 -0.62 16 13 Cl -0.06 -0.83 27.94 -51.86 -1.45 -2.28 16 14 C -0.09 -1.51 9.19 -39.21 -0.36 -1.87 16 15 C -0.13 -2.84 8.06 -38.55 -0.31 -3.15 16 16 C 0.15 3.34 5.73 -104.68 -0.60 2.74 16 17 C -0.42 -9.84 8.58 -37.85 -0.32 -10.17 16 18 H 0.09 2.09 7.37 -52.48 -0.39 1.70 16 19 C 0.08 1.64 5.16 -17.30 -0.09 1.55 16 20 N -0.76 -16.45 10.95 55.56 0.61 -15.84 16 21 Si 0.91 16.53 29.60 -169.99 -5.03 11.50 16 22 H -0.26 -4.75 7.11 56.52 0.40 -4.35 16 23 H -0.26 -4.63 7.11 56.52 0.40 -4.23 16 24 H -0.27 -4.86 7.11 56.52 0.40 -4.45 16 25 H 0.10 1.68 8.06 -52.49 -0.42 1.26 16 26 H 0.10 1.50 6.09 -52.49 -0.32 1.19 16 27 H 0.14 1.63 6.13 -52.49 -0.32 1.31 16 28 H 0.14 1.31 8.06 -52.49 -0.42 0.89 16 29 H 0.15 2.50 6.15 -52.48 -0.32 2.17 16 30 H 0.13 2.79 4.24 -52.48 -0.22 2.56 16 31 H 0.29 5.66 8.30 -40.82 -0.34 5.33 16 LS Contribution 310.34 15.07 4.68 4.68 Total: -1.00 -23.66 310.34 -9.29 -32.95 By element: Atomic # 1 Polarization: 4.93 SS G_CDS: -1.55 Total: 3.38 kcal Atomic # 6 Polarization: -15.20 SS G_CDS: -5.86 Total: -21.07 kcal Atomic # 7 Polarization: -28.29 SS G_CDS: 1.38 Total: -26.90 kcal Atomic # 14 Polarization: 16.53 SS G_CDS: -5.03 Total: 11.50 kcal Atomic # 17 Polarization: -1.63 SS G_CDS: -2.90 Total: -4.53 kcal Total LS contribution 4.68 Total: 4.68 kcal Total: -23.66 -9.29 -32.95 kcal The number of atoms in the molecule is 31 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC001222353057.mol2 31 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 76.920 kcal (2) G-P(sol) polarization free energy of solvation -23.662 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.286 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.948 kcal (6) G-S(sol) free energy of system = (1) + (5) 43.972 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds