Wall clock time and date at job start Tue Mar 31 2020 11:55:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46496 * 1 3 3 C 1.46502 * 119.99798 * 2 1 4 4 C 1.50703 * 109.46841 * 269.99673 * 3 2 1 5 5 H 1.07997 * 119.99827 * 359.97438 * 4 3 2 6 6 C 1.37875 * 120.00160 * 180.02562 * 4 3 2 7 7 N 1.31513 * 120.00038 * 359.97438 * 6 4 3 8 8 Si 1.86797 * 120.00419 * 179.97438 * 6 4 3 9 9 H 1.48501 * 109.47021 * 59.99314 * 8 6 4 10 10 H 1.48496 * 109.47781 * 179.97438 * 8 6 4 11 11 H 1.48505 * 109.46872 * 300.00081 * 8 6 4 12 12 C 1.34767 * 120.00185 * 179.97438 * 2 1 3 13 13 O 1.21285 * 120.00305 * 180.02562 * 12 2 1 14 14 C 1.50699 * 120.00316 * 0.02562 * 12 2 1 15 15 O 1.42896 * 109.47569 * 179.97438 * 14 12 2 16 16 C 1.35916 * 117.00381 * 180.02562 * 15 14 12 17 17 C 1.38749 * 120.03451 * 0.02562 * 16 15 14 18 18 C 1.38135 * 119.98189 * 179.97438 * 17 16 15 19 19 C 1.38359 * 120.05814 * 359.97438 * 18 17 16 20 20 Cl 1.73601 * 119.96592 * 180.27823 * 19 18 17 21 21 C 1.38465 * 120.06991 * 0.02562 * 19 18 17 22 22 Cl 1.73599 * 119.98882 * 180.02562 * 21 19 18 23 23 C 1.38272 * 120.01599 * 359.97438 * 21 19 18 24 24 H 1.08999 * 109.47933 * 270.00394 * 1 2 3 25 25 H 1.09000 * 109.47417 * 30.00784 * 1 2 3 26 26 H 1.09004 * 109.47077 * 150.00645 * 1 2 3 27 27 H 1.09000 * 109.47221 * 29.98876 * 3 2 1 28 28 H 1.08995 * 109.47604 * 149.99623 * 3 2 1 29 29 H 0.97002 * 120.00572 * 180.02562 * 7 6 4 30 30 H 1.09002 * 109.46917 * 59.99881 * 14 12 2 31 31 H 1.08999 * 109.47480 * 300.00372 * 14 12 2 32 32 H 1.08005 * 120.01261 * 0.02562 * 17 16 15 33 33 H 1.08004 * 119.97447 * 180.02562 * 18 17 16 34 34 H 1.08002 * 120.02305 * 179.97438 * 23 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4486 1.7037 -1.4209 5 1 2.0981 1.0956 -2.2417 6 6 3.1268 2.8774 -1.6729 7 7 3.5541 3.6176 -0.6734 8 14 3.4388 3.4162 -3.4341 9 1 2.1415 3.5939 -4.1345 10 1 4.1812 4.7023 -3.4342 11 1 4.2413 2.3808 -4.1336 12 6 2.1388 -1.1671 0.0005 13 8 3.3517 -1.1671 0.0010 14 6 1.3855 -2.4722 0.0005 15 8 2.3140 -3.5584 0.0005 16 6 1.7946 -4.8144 0.0000 17 6 0.4192 -4.9971 -0.0011 18 6 -0.1075 -6.2741 -0.0022 19 6 0.7353 -7.3713 -0.0027 20 17 0.0708 -8.9751 -0.0114 21 6 2.1083 -7.1916 -0.0017 22 17 3.1638 -8.5699 -0.0031 23 6 2.6387 -5.9147 -0.0006 24 1 -0.3635 0.0001 1.0276 25 1 -0.3634 0.8899 -0.5139 26 1 -0.3633 -0.8901 -0.5137 27 1 1.6082 2.0285 0.5137 28 1 3.1498 1.1386 0.5138 29 1 4.0309 4.4435 -0.8506 30 1 0.7591 -2.5302 -0.8897 31 1 0.7584 -2.5299 0.8902 32 1 -0.2395 -4.1412 -0.0019 33 1 -1.1781 -6.4162 -0.0034 34 1 3.7096 -5.7744 0.0006 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000037975752.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:09 Heat of formation + Delta-G solvation = -54.857415 kcal Electronic energy + Delta-G solvation = -20908.673884 eV Core-core repulsion = 17280.152399 eV Total energy + Delta-G solvation = -3628.521485 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -40.63938 -39.11248 -37.88333 -36.81813 -36.36095 -34.95524 -32.72919 -31.53548 -30.30217 -28.98481 -27.28208 -25.78357 -23.56344 -23.07236 -22.19065 -18.87976 -18.80735 -16.92943 -16.84051 -16.74538 -16.23873 -16.10554 -15.33543 -15.18091 -14.58346 -14.42042 -14.17539 -13.95584 -13.52757 -12.84387 -12.67627 -12.65348 -12.28418 -12.17662 -12.01471 -11.83104 -11.75206 -11.31222 -11.27691 -11.15224 -10.99121 -10.83335 -10.64020 -10.22661 -9.73776 -9.32854 -9.10360 -8.50246 -8.49611 -7.82740 -6.10911 -4.16453 0.61269 0.78155 1.51658 1.85172 2.73767 3.08532 3.15287 3.28354 3.33343 3.36874 3.93631 4.23759 4.39411 4.49872 4.60722 4.80048 4.87801 4.92903 5.01897 5.23934 5.32311 5.38239 5.44803 5.65020 5.75002 5.80524 5.94085 6.05057 6.83190 7.04961 7.31400 7.38936 7.84276 8.13441 8.19046 8.76389 8.91173 9.48878 10.97257 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.026418 B = 0.002459 C = 0.002373 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1059.610364 B =11383.427687 C =11794.094814 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.597 5.597 3 C 0.247 3.753 4 C -0.531 4.531 5 H 0.057 0.943 6 C 0.062 3.938 7 N -0.894 5.894 8 Si 0.900 3.100 9 H -0.277 1.277 10 H -0.286 1.286 11 H -0.275 1.275 12 C 0.506 3.494 13 O -0.516 6.516 14 C 0.039 3.961 15 O -0.277 6.277 16 C 0.158 3.842 17 C -0.198 4.198 18 C -0.055 4.055 19 C -0.076 4.076 20 Cl -0.055 7.055 21 C 0.010 3.990 22 Cl -0.043 7.043 23 C -0.134 4.134 24 H 0.049 0.951 25 H 0.080 0.920 26 H 0.055 0.945 27 H 0.037 0.963 28 H 0.046 0.954 29 H 0.265 0.735 30 H 0.091 0.909 31 H 0.090 0.910 32 H 0.145 0.855 33 H 0.146 0.854 34 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.786 -21.435 2.879 24.168 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 N -0.331 5.331 3 C 0.128 3.872 4 C -0.570 4.570 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.532 5.532 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.201 1.201 12 C 0.290 3.710 13 O -0.391 6.391 14 C -0.040 4.040 15 O -0.188 6.188 16 C 0.110 3.890 17 C -0.217 4.217 18 C -0.074 4.074 19 C -0.103 4.103 20 Cl -0.027 7.027 21 C -0.018 4.018 22 Cl -0.013 7.013 23 C -0.153 4.153 24 H 0.067 0.933 25 H 0.098 0.902 26 H 0.073 0.927 27 H 0.055 0.945 28 H 0.064 0.936 29 H 0.075 0.925 30 H 0.109 0.891 31 H 0.108 0.892 32 H 0.163 0.837 33 H 0.163 0.837 34 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges -9.780 -21.422 2.929 23.730 hybrid contribution -0.166 0.201 -1.005 1.038 sum -9.946 -21.221 1.924 23.515 Atomic orbital electron populations 1.21726 0.81186 1.02886 1.00764 1.48099 1.06300 1.07244 1.71486 1.19365 0.92653 0.77402 0.97767 1.21368 1.37040 1.06471 0.92129 0.92438 1.24933 0.95187 0.96323 0.97571 1.69914 1.38080 1.14359 1.30883 0.86536 0.78406 0.77892 0.84469 1.20216 1.21105 1.20091 1.19631 0.88171 0.84159 0.79059 1.90740 1.13373 1.86595 1.48380 1.22816 0.92129 0.85774 1.03269 1.86244 1.34599 1.10922 1.87083 1.18939 0.91441 0.85193 0.93403 1.21384 0.94087 0.98392 1.07837 1.20789 1.00059 0.89881 0.96646 1.20574 0.91304 0.87620 1.10840 1.98376 1.85407 1.21804 1.97068 1.20369 0.89308 0.89126 1.02948 1.98399 1.65217 1.41184 1.96549 1.20213 1.01460 0.87745 1.05926 0.93277 0.90160 0.92669 0.94550 0.93613 0.92530 0.89073 0.89193 0.83696 0.83663 0.82860 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 1.07 10.24 59.84 0.61 1.68 16 2 N -0.60 -11.83 2.86 -182.96 -0.52 -12.35 16 3 C 0.25 6.21 5.16 -5.19 -0.03 6.19 16 4 C -0.53 -14.66 9.39 -34.44 -0.32 -14.99 16 5 H 0.06 1.58 7.81 -52.49 -0.41 1.17 16 6 C 0.06 1.75 5.46 -17.82 -0.10 1.65 16 7 N -0.89 -26.07 13.29 55.43 0.74 -25.33 16 8 Si 0.90 21.46 29.54 -169.99 -5.02 16.44 16 9 H -0.28 -6.37 7.11 56.52 0.40 -5.97 16 10 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 11 H -0.28 -6.63 7.11 56.52 0.40 -6.23 16 12 C 0.51 10.05 7.75 -10.99 -0.09 9.96 16 13 O -0.52 -12.99 16.08 -14.36 -0.23 -13.22 16 14 C 0.04 0.52 3.77 36.00 0.14 0.66 16 15 O -0.28 -4.20 9.67 -39.39 -0.38 -4.58 16 16 C 0.16 1.90 6.69 -39.23 -0.26 1.64 16 17 C -0.20 -1.83 9.04 -39.43 -0.36 -2.18 16 18 C -0.05 -0.46 9.82 -39.57 -0.39 -0.85 16 19 C -0.08 -0.75 6.32 -39.45 -0.25 -1.00 16 20 Cl -0.06 -0.51 27.95 -51.86 -1.45 -1.96 16 21 C 0.01 0.11 6.32 -39.49 -0.25 -0.14 16 22 Cl -0.04 -0.43 27.95 -51.86 -1.45 -1.88 16 23 C -0.13 -1.55 9.77 -39.41 -0.38 -1.94 16 24 H 0.05 0.55 8.14 -51.93 -0.42 0.13 16 25 H 0.08 1.15 8.07 -51.93 -0.42 0.73 16 26 H 0.05 0.56 6.44 -51.93 -0.33 0.22 16 27 H 0.04 0.92 8.07 -51.93 -0.42 0.50 16 28 H 0.05 1.31 7.42 -51.93 -0.39 0.92 16 29 H 0.27 7.32 8.31 -40.82 -0.34 6.98 16 30 H 0.09 0.99 6.92 -51.93 -0.36 0.63 16 31 H 0.09 0.91 7.63 -51.93 -0.40 0.52 16 32 H 0.15 0.99 6.30 -52.48 -0.33 0.66 16 33 H 0.15 0.86 8.06 -52.48 -0.42 0.44 16 34 H 0.15 1.72 8.06 -52.49 -0.42 1.30 16 LS Contribution 329.61 15.07 4.97 4.97 Total: -1.00 -33.07 329.61 -8.48 -41.55 By element: Atomic # 1 Polarization: -0.85 SS G_CDS: -3.46 Total: -4.31 kcal Atomic # 6 Polarization: 2.36 SS G_CDS: -1.67 Total: 0.68 kcal Atomic # 7 Polarization: -37.90 SS G_CDS: 0.21 Total: -37.69 kcal Atomic # 8 Polarization: -17.19 SS G_CDS: -0.61 Total: -17.80 kcal Atomic # 14 Polarization: 21.46 SS G_CDS: -5.02 Total: 16.44 kcal Atomic # 17 Polarization: -0.94 SS G_CDS: -2.90 Total: -3.84 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -33.07 -8.48 -41.55 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000037975752.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.306 kcal (2) G-P(sol) polarization free energy of solvation -33.068 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.374 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.551 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.857 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds