Wall clock time and date at job start Tue Mar 31 2020 11:48:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 N 1.46500 * 109.47289 * 2 1 4 4 C 1.37095 * 120.00036 * 264.74591 * 3 2 1 5 5 H 1.08006 * 119.99879 * 146.16862 * 4 3 2 6 6 C 1.38949 * 120.00195 * 326.16747 * 4 3 2 7 7 N 1.31418 * 119.99850 * 337.68103 * 6 4 3 8 8 Si 1.86799 * 120.00029 * 157.67975 * 6 4 3 9 9 H 1.48499 * 109.47342 * 0.02562 * 8 6 4 10 10 H 1.48505 * 109.47134 * 120.00405 * 8 6 4 11 11 H 1.48502 * 109.46909 * 240.00032 * 8 6 4 12 12 C 1.34783 * 120.00158 * 84.74628 * 3 2 1 13 13 O 1.21286 * 119.99879 * 180.02562 * 12 3 2 14 14 C 1.50701 * 119.99643 * 0.02562 * 12 3 2 15 15 O 1.42895 * 109.46935 * 180.02562 * 14 12 3 16 16 C 1.35923 * 117.00268 * 179.97438 * 15 14 12 17 17 C 1.38696 * 120.05100 * 0.02562 * 16 15 14 18 18 C 1.38259 * 119.94487 * 179.97438 * 17 16 15 19 19 Cl 1.73601 * 119.97258 * 179.97438 * 18 17 16 20 20 C 1.38391 * 120.05210 * 359.97438 * 18 17 16 21 21 C 1.38235 * 120.10683 * 359.97438 * 20 18 17 22 22 C 1.38259 * 120.05374 * 0.02562 * 21 20 18 23 23 Cl 1.73600 * 120.02642 * 180.27272 * 22 21 20 24 24 H 1.08996 * 109.47213 * 300.00535 * 1 2 3 25 25 H 1.09004 * 109.46916 * 60.00190 * 1 2 3 26 26 H 1.08997 * 109.47534 * 179.97438 * 1 2 3 27 27 H 1.09000 * 109.47168 * 239.99980 * 2 1 3 28 28 H 1.09004 * 109.46916 * 119.99810 * 2 1 3 29 29 H 0.97002 * 119.99925 * 179.97438 * 7 6 4 30 30 H 1.09001 * 109.47597 * 59.99533 * 14 12 3 31 31 H 1.09003 * 109.46677 * 299.99410 * 14 12 3 32 32 H 1.08000 * 120.02413 * 359.95854 * 17 16 15 33 33 H 1.08004 * 119.94800 * 180.02562 * 20 18 17 34 34 H 1.07997 * 119.97464 * 180.02562 * 21 20 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.3493 1.9912 -1.1823 5 1 2.1816 3.0506 -1.3088 6 6 2.9007 1.2466 -2.2178 7 7 3.5052 0.1087 -1.9593 8 14 2.7825 1.8630 -3.9772 9 1 2.0592 3.1597 -4.0000 10 1 4.1485 2.0489 -4.5294 11 1 2.0465 0.8705 -4.8010 12 6 2.1422 2.0522 1.1623 13 8 2.5461 3.1959 1.1622 14 6 1.7789 1.3814 2.4620 15 8 1.9940 2.2903 3.5435 16 6 1.7123 1.8389 4.7942 17 6 1.2392 0.5479 4.9766 18 6 0.9538 0.0909 6.2498 19 17 0.3610 -1.5246 6.4788 20 6 1.1404 0.9202 7.3419 21 6 1.6128 2.2069 7.1627 22 6 1.8996 2.6685 5.8914 23 17 2.4996 4.2821 5.6679 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 1.8933 -0.5138 -0.8900 28 1 1.8933 -0.5138 0.8900 29 1 3.8898 -0.4113 -2.6823 30 1 2.4008 0.4971 2.6008 31 1 0.7295 1.0875 2.4381 32 1 1.0936 -0.0996 4.1246 33 1 0.9173 0.5613 8.3358 34 1 1.7580 2.8522 8.0165 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000068241163.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:24 Heat of formation + Delta-G solvation = -50.960916 kcal Electronic energy + Delta-G solvation = -21668.636933 eV Core-core repulsion = 18040.284413 eV Total energy + Delta-G solvation = -3628.352520 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -40.38101 -38.72509 -37.48447 -36.73708 -36.12675 -35.03151 -32.19725 -30.91592 -30.35033 -29.59588 -28.07520 -24.83807 -23.02279 -22.63617 -22.25811 -19.28205 -18.59806 -16.91075 -16.48746 -16.47682 -16.07383 -15.83861 -15.14881 -14.92557 -14.26124 -14.21106 -14.05817 -13.45889 -13.17847 -13.00114 -12.59544 -12.47486 -12.41449 -11.94204 -11.80210 -11.57081 -11.21378 -11.17412 -11.14581 -11.02832 -10.80328 -10.79825 -10.40407 -10.36794 -10.18855 -9.06656 -9.04801 -8.52029 -8.29371 -7.61729 -6.43046 -4.04305 0.73448 1.03786 1.79261 2.17635 2.98874 3.10283 3.23144 3.26002 3.30730 3.71516 4.10516 4.44342 4.70196 4.75356 4.80530 4.91560 5.12408 5.22639 5.33093 5.42119 5.54197 5.62675 5.81676 5.82917 5.88659 6.08806 6.18488 6.23045 6.36641 6.76621 7.13496 7.22266 7.51687 8.12322 8.39811 9.07072 9.26994 9.85288 10.60855 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.016527 B = 0.003719 C = 0.003129 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1693.789054 B = 7526.372810 C = 8947.105687 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.166 4.166 2 C 0.090 3.910 3 N -0.433 5.433 4 C -0.306 4.306 5 H 0.096 0.904 6 C 0.036 3.964 7 N -0.868 5.868 8 Si 0.920 3.080 9 H -0.266 1.266 10 H -0.281 1.281 11 H -0.279 1.279 12 C 0.457 3.543 13 O -0.556 6.556 14 C 0.041 3.959 15 O -0.266 6.266 16 C 0.163 3.837 17 C -0.198 4.198 18 C 0.010 3.990 19 Cl -0.062 7.062 20 C -0.147 4.147 21 C -0.060 4.060 22 C -0.071 4.071 23 Cl -0.043 7.043 24 H 0.040 0.960 25 H 0.060 0.940 26 H 0.053 0.947 27 H 0.118 0.882 28 H 0.046 0.954 29 H 0.269 0.731 30 H 0.084 0.916 31 H 0.081 0.919 32 H 0.149 0.851 33 H 0.142 0.858 34 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.413 -3.969 16.043 17.728 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.225 4.225 2 C -0.034 4.034 3 N -0.154 5.154 4 C -0.433 4.433 5 H 0.113 0.887 6 C -0.168 4.168 7 N -0.506 5.506 8 Si 0.746 3.254 9 H -0.191 1.191 10 H -0.207 1.207 11 H -0.205 1.205 12 C 0.243 3.757 13 O -0.438 6.438 14 C -0.037 4.037 15 O -0.177 6.177 16 C 0.114 3.886 17 C -0.217 4.217 18 C -0.017 4.017 19 Cl -0.033 7.033 20 C -0.166 4.166 21 C -0.079 4.079 22 C -0.098 4.098 23 Cl -0.014 7.014 24 H 0.059 0.941 25 H 0.079 0.921 26 H 0.072 0.928 27 H 0.136 0.864 28 H 0.064 0.936 29 H 0.079 0.921 30 H 0.102 0.898 31 H 0.099 0.901 32 H 0.166 0.834 33 H 0.159 0.841 34 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -6.030 -3.343 15.831 17.267 hybrid contribution -0.112 -0.328 -0.859 0.927 sum -6.141 -3.671 14.971 16.593 Atomic orbital electron populations 1.22230 0.97936 1.00624 1.01664 1.21690 0.91937 0.85314 1.04431 1.43449 1.55838 1.11917 1.04230 1.19537 1.40029 0.95729 0.88031 0.88664 1.25362 0.94251 0.96475 1.00704 1.69922 1.32361 1.15245 1.33026 0.85968 0.78239 0.79193 0.81955 1.19054 1.20674 1.20501 1.19694 0.83782 0.88473 0.83704 1.90586 1.49033 1.18102 1.86071 1.22929 1.01699 0.92694 0.86365 1.86345 1.80067 1.40170 1.11078 1.18712 0.93176 0.90972 0.85774 1.21150 1.07080 0.95790 0.97700 1.20684 0.99758 0.87031 0.94195 1.98384 1.86486 1.21174 1.97300 1.20837 1.04056 0.93252 0.98449 1.20827 0.96787 0.95378 0.94942 1.20303 1.08048 0.88896 0.92599 1.98397 1.86170 1.19408 1.97472 0.94087 0.92061 0.92763 0.86399 0.93559 0.92100 0.89827 0.90140 0.83367 0.84061 0.83476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -2.79 10.15 37.15 0.38 -2.42 16 2 C 0.09 1.85 5.43 -4.04 -0.02 1.82 16 3 N -0.43 -10.64 2.56 -114.81 -0.29 -10.93 16 4 C -0.31 -8.27 8.98 -14.93 -0.13 -8.40 16 5 H 0.10 2.72 7.70 -52.48 -0.40 2.32 16 6 C 0.04 0.93 4.92 -17.47 -0.09 0.84 16 7 N -0.87 -22.55 11.33 55.50 0.63 -21.92 16 8 Si 0.92 20.03 29.61 -169.99 -5.03 15.00 16 9 H -0.27 -5.81 7.11 56.52 0.40 -5.41 16 10 H -0.28 -6.16 7.11 56.52 0.40 -5.75 16 11 H -0.28 -5.88 7.11 56.52 0.40 -5.48 16 12 C 0.46 11.14 7.67 -10.98 -0.08 11.05 16 13 O -0.56 -15.91 16.32 -14.36 -0.23 -16.14 16 14 C 0.04 0.77 3.83 36.01 0.14 0.90 16 15 O -0.27 -5.06 9.13 -39.41 -0.36 -5.42 16 16 C 0.16 2.49 6.68 -39.20 -0.26 2.23 16 17 C -0.20 -2.57 8.82 -39.40 -0.35 -2.91 16 18 C 0.01 0.12 6.32 -39.52 -0.25 -0.13 16 19 Cl -0.06 -0.64 28.95 -51.86 -1.50 -2.14 16 20 C -0.15 -1.43 9.83 -39.53 -0.39 -1.82 16 21 C -0.06 -0.63 9.82 -39.57 -0.39 -1.02 16 22 C -0.07 -0.98 6.33 -39.36 -0.25 -1.23 16 23 Cl -0.04 -0.64 28.50 -51.86 -1.48 -2.12 16 24 H 0.04 0.64 6.60 -51.93 -0.34 0.29 16 25 H 0.06 1.10 8.14 -51.93 -0.42 0.68 16 26 H 0.05 0.76 8.14 -51.93 -0.42 0.33 16 27 H 0.12 2.68 5.34 -51.93 -0.28 2.41 16 28 H 0.05 0.84 6.66 -51.93 -0.35 0.49 16 29 H 0.27 6.55 8.31 -40.82 -0.34 6.21 16 30 H 0.08 1.39 6.93 -51.93 -0.36 1.03 16 31 H 0.08 1.27 6.06 -51.93 -0.31 0.96 16 32 H 0.15 1.79 6.30 -52.49 -0.33 1.46 16 33 H 0.14 1.01 8.06 -52.48 -0.42 0.59 16 34 H 0.15 1.12 8.06 -52.49 -0.42 0.69 16 LS Contribution 322.79 15.07 4.86 4.86 Total: -1.00 -30.76 322.79 -8.30 -39.06 By element: Atomic # 1 Polarization: 4.01 SS G_CDS: -3.20 Total: 0.81 kcal Atomic # 6 Polarization: 0.63 SS G_CDS: -1.70 Total: -1.07 kcal Atomic # 7 Polarization: -33.18 SS G_CDS: 0.34 Total: -32.85 kcal Atomic # 8 Polarization: -20.97 SS G_CDS: -0.59 Total: -21.56 kcal Atomic # 14 Polarization: 20.03 SS G_CDS: -5.03 Total: 15.00 kcal Atomic # 17 Polarization: -1.28 SS G_CDS: -2.98 Total: -4.26 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -30.76 -8.30 -39.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000068241163.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.899 kcal (2) G-P(sol) polarization free energy of solvation -30.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.656 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.305 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.062 kcal (6) G-S(sol) free energy of system = (1) + (5) -50.961 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds