Wall clock time and date at job start Tue Mar 31 2020 11:55:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34227 * 117.00039 * 2 1 4 4 O 1.20823 * 120.00198 * 359.97438 * 3 2 1 5 5 C 1.50703 * 120.00016 * 179.97438 * 3 2 1 6 6 H 1.08996 * 109.47398 * 300.00100 * 5 3 2 7 7 C 1.50699 * 109.46981 * 60.00086 * 5 3 2 8 8 C 1.38246 * 119.99507 * 16.67832 * 7 5 3 9 9 C 1.38202 * 120.02835 * 179.97438 * 8 7 5 10 10 C 1.38380 * 120.01363 * 359.97438 * 9 8 7 11 11 Cl 1.73590 * 120.00873 * 179.97438 * 10 9 8 12 12 C 1.38307 * 119.98452 * 359.97438 * 10 9 8 13 13 C 1.38340 * 119.99338 * 196.40211 * 7 5 3 14 14 Cl 1.73600 * 120.00827 * 0.02562 * 13 7 5 15 15 N 1.46500 * 109.47123 * 180.02562 * 5 3 2 16 16 C 1.46504 * 119.99667 * 293.93920 * 15 5 3 17 17 C 1.36934 * 120.00200 * 113.94498 * 15 5 3 18 18 H 1.08004 * 119.99396 * 339.93027 * 17 15 5 19 19 C 1.38808 * 120.00133 * 159.93603 * 17 15 5 20 20 N 1.31622 * 120.00017 * 339.99119 * 19 17 15 21 21 Si 1.86801 * 119.99820 * 160.26936 * 19 17 15 22 22 H 1.48502 * 109.47003 * 264.73432 * 21 19 17 23 23 H 1.48501 * 109.47345 * 24.73693 * 21 19 17 24 24 H 1.48497 * 109.46915 * 144.73554 * 21 19 17 25 25 H 1.08999 * 109.47300 * 60.00127 * 1 2 3 26 26 H 1.08995 * 109.47144 * 180.02562 * 1 2 3 27 27 H 1.09003 * 109.47070 * 299.99771 * 1 2 3 28 28 H 1.08000 * 119.98661 * 359.95359 * 8 7 5 29 29 H 1.07996 * 119.99036 * 179.97438 * 9 8 7 30 30 H 1.08005 * 120.01575 * 180.02562 * 12 10 9 31 31 H 1.08996 * 109.47449 * 265.00894 * 16 15 5 32 32 H 1.08998 * 109.47067 * 25.00857 * 16 15 5 33 33 H 1.08998 * 109.46776 * 145.00969 * 16 15 5 34 34 H 0.96992 * 119.99922 * 180.27535 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 3.9557 0.7809 0.8908 7 6 4.1056 0.5915 -1.2295 8 6 3.2677 0.3277 -2.2970 9 6 3.7616 -0.2985 -3.4257 10 6 5.0955 -0.6614 -3.4881 11 17 5.7157 -1.4486 -4.9056 12 6 5.9345 -0.3968 -2.4209 13 6 5.4403 0.2333 -1.2927 14 17 6.4939 0.5705 0.0452 15 7 3.9817 2.6797 0.0011 16 6 3.6961 3.5284 -1.1585 17 6 4.6370 3.1996 1.0853 18 1 4.5691 2.7074 2.0442 19 6 5.3883 4.3591 0.9518 20 7 5.8017 4.7421 -0.2377 21 14 5.8193 5.3717 2.4612 22 1 4.8261 6.4636 2.6248 23 1 5.8000 4.5006 3.6637 24 1 7.1743 5.9559 2.2949 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 2.2265 0.6107 -2.2488 29 1 3.1064 -0.5047 -4.2590 30 1 6.9758 -0.6795 -2.4693 31 1 4.5620 3.5428 -1.8203 32 1 2.8347 3.1316 -1.6957 33 1 3.4791 4.5421 -0.8220 34 1 6.3301 5.5502 -0.3305 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000072596832.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:15 Heat of formation + Delta-G solvation = -38.578788 kcal Electronic energy + Delta-G solvation = -22739.907216 eV Core-core repulsion = 19112.091626 eV Total energy + Delta-G solvation = -3627.815590 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.28845 -38.95058 -36.68743 -36.20127 -35.76447 -35.13114 -32.37092 -30.68428 -30.10946 -28.01499 -26.44713 -25.79702 -22.98429 -22.29561 -21.74481 -19.72057 -17.49091 -17.22899 -16.64873 -16.27805 -15.81416 -15.32529 -15.12349 -14.63169 -14.00751 -13.84369 -13.52246 -13.37785 -13.22229 -12.71573 -12.37471 -12.22084 -11.86226 -11.73966 -11.54927 -11.17658 -10.95477 -10.90731 -10.83766 -10.70404 -10.59053 -10.35040 -10.25404 -10.14597 -10.02357 -9.77307 -8.68495 -8.64894 -8.28924 -7.03466 -5.87940 -3.27966 1.23508 1.36530 2.09669 2.73219 2.81256 3.14483 3.35940 3.42242 3.42428 3.69294 4.42439 4.88463 4.98498 5.08303 5.25391 5.31688 5.35461 5.37774 5.47266 5.53873 5.63800 5.77592 5.85683 5.97509 6.19411 6.33199 6.57013 6.68836 6.77736 6.86735 7.30723 7.58816 7.70984 8.13101 8.39712 9.02634 9.63198 10.08898 11.16541 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.012160 B = 0.006074 C = 0.004642 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2302.151214 B = 4608.397282 C = 6030.972564 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.368 6.368 3 C 0.433 3.567 4 O -0.490 6.490 5 C 0.218 3.782 6 H 0.116 0.884 7 C -0.064 4.064 8 C -0.088 4.088 9 C -0.109 4.109 10 C -0.032 4.032 11 Cl -0.076 7.076 12 C -0.107 4.107 13 C 0.004 3.996 14 Cl -0.032 7.032 15 N -0.544 5.544 16 C 0.163 3.837 17 C -0.259 4.259 18 H 0.073 0.927 19 C 0.017 3.983 20 N -0.885 5.885 21 Si 0.903 3.097 22 H -0.286 1.286 23 H -0.277 1.277 24 H -0.290 1.290 25 H 0.056 0.944 26 H 0.092 0.908 27 H 0.057 0.943 28 H 0.127 0.873 29 H 0.133 0.867 30 H 0.139 0.861 31 H 0.035 0.965 32 H 0.005 0.995 33 H 0.047 0.953 34 H 0.256 0.744 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.946 -12.462 -4.982 13.989 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 O -0.284 6.284 3 C 0.272 3.728 4 O -0.375 6.375 5 C 0.105 3.895 6 H 0.134 0.866 7 C -0.069 4.069 8 C -0.107 4.107 9 C -0.128 4.128 10 C -0.060 4.060 11 Cl -0.047 7.047 12 C -0.126 4.126 13 C -0.025 4.025 14 Cl -0.002 7.002 15 N -0.260 5.260 16 C 0.019 3.981 17 C -0.388 4.388 18 H 0.091 0.909 19 C -0.184 4.184 20 N -0.527 5.527 21 Si 0.733 3.267 22 H -0.213 1.213 23 H -0.202 1.202 24 H -0.217 1.217 25 H 0.074 0.926 26 H 0.111 0.889 27 H 0.075 0.925 28 H 0.145 0.855 29 H 0.150 0.850 30 H 0.157 0.843 31 H 0.053 0.947 32 H 0.024 0.976 33 H 0.066 0.934 34 H 0.066 0.934 Dipole moment (debyes) X Y Z Total from point charges -3.896 -11.929 -5.007 13.511 hybrid contribution 0.125 0.744 0.621 0.977 sum -3.770 -11.185 -4.386 12.592 Atomic orbital electron populations 1.23114 0.78385 1.02699 1.01988 1.86654 1.21998 1.35093 1.84700 1.26129 0.93790 0.80962 0.71958 1.90612 1.66682 1.36354 1.43816 1.18791 0.85685 0.88928 0.96108 0.86604 1.20257 0.92626 0.95941 0.98045 1.20863 0.99415 0.98203 0.92245 1.20930 0.93482 0.99573 0.98783 1.20580 0.94007 1.02150 0.89228 1.98346 1.87690 1.79220 1.39436 1.20797 1.00248 1.00274 0.91286 1.20485 0.91257 0.99664 0.91049 1.98419 1.64632 1.93410 1.43756 1.43896 1.62652 1.01239 1.18258 1.20841 0.95423 0.93839 0.87998 1.19137 1.24812 1.07650 0.87189 0.90873 1.24884 0.97096 0.99786 0.96588 1.70131 1.36477 1.24493 1.21575 0.86269 0.77363 0.80632 0.82478 1.21305 1.20222 1.21683 0.92573 0.88908 0.92459 0.85489 0.84957 0.84339 0.94664 0.97620 0.93431 0.93425 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.40 10.56 101.05 1.07 1.47 16 2 O -0.37 -5.88 9.74 -39.25 -0.38 -6.27 16 3 C 0.43 8.33 5.37 36.01 0.19 8.53 16 4 O -0.49 -10.78 14.87 -18.75 -0.28 -11.06 16 5 C 0.22 4.39 2.18 -70.23 -0.15 4.24 16 6 H 0.12 2.29 7.25 -51.93 -0.38 1.91 16 7 C -0.06 -1.16 4.62 -104.58 -0.48 -1.65 16 8 C -0.09 -1.40 8.84 -39.59 -0.35 -1.75 16 9 C -0.11 -1.52 9.83 -39.54 -0.39 -1.91 16 10 C -0.03 -0.46 6.32 -39.50 -0.25 -0.71 16 11 Cl -0.08 -0.94 28.96 -51.86 -1.50 -2.44 16 12 C -0.11 -1.64 9.62 -39.51 -0.38 -2.02 16 13 C 0.00 0.06 6.31 -39.50 -0.25 -0.19 16 14 Cl -0.03 -0.59 27.21 -51.86 -1.41 -2.00 16 15 N -0.54 -12.94 2.49 -176.15 -0.44 -13.38 16 16 C 0.16 3.98 7.69 59.85 0.46 4.44 16 17 C -0.26 -6.66 9.20 -15.06 -0.14 -6.80 16 18 H 0.07 1.86 7.87 -52.48 -0.41 1.44 16 19 C 0.02 0.45 4.95 -17.43 -0.09 0.37 16 20 N -0.89 -24.37 10.96 55.49 0.61 -23.77 16 21 Si 0.90 21.19 29.60 -169.99 -5.03 16.16 16 22 H -0.29 -6.82 7.11 56.52 0.40 -6.42 16 23 H -0.28 -6.35 7.11 56.52 0.40 -5.95 16 24 H -0.29 -6.88 7.11 56.52 0.40 -6.48 16 25 H 0.06 0.67 8.13 -51.93 -0.42 0.25 16 26 H 0.09 0.83 8.14 -51.93 -0.42 0.40 16 27 H 0.06 0.72 8.13 -51.93 -0.42 0.29 16 28 H 0.13 1.97 6.39 -52.49 -0.34 1.64 16 29 H 0.13 1.51 8.06 -52.49 -0.42 1.09 16 30 H 0.14 1.90 8.06 -52.48 -0.42 1.48 16 31 H 0.04 0.92 7.41 -51.93 -0.38 0.53 16 32 H 0.01 0.12 6.97 -51.93 -0.36 -0.24 16 33 H 0.05 1.26 7.32 -51.93 -0.38 0.88 16 34 H 0.26 6.88 8.31 -40.82 -0.34 6.54 16 LS Contribution 322.67 15.07 4.86 4.86 Total: -1.00 -28.67 322.67 -7.83 -36.50 By element: Atomic # 1 Polarization: 0.87 SS G_CDS: -3.50 Total: -2.63 kcal Atomic # 6 Polarization: 4.77 SS G_CDS: -0.76 Total: 4.02 kcal Atomic # 7 Polarization: -37.32 SS G_CDS: 0.17 Total: -37.15 kcal Atomic # 8 Polarization: -16.67 SS G_CDS: -0.66 Total: -17.33 kcal Atomic # 14 Polarization: 21.19 SS G_CDS: -5.03 Total: 16.16 kcal Atomic # 17 Polarization: -1.53 SS G_CDS: -2.91 Total: -4.44 kcal Total LS contribution 4.86 Total: 4.86 kcal Total: -28.67 -7.83 -36.50 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000072596832.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.078 kcal (2) G-P(sol) polarization free energy of solvation -28.671 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.749 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.830 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.501 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.579 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds