Wall clock time and date at job start Tue Mar 31 2020 11:41:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 H 1.09003 * 109.47355 * 2 1 4 4 C 1.50704 * 109.47086 * 119.99754 * 2 1 3 5 5 H 1.07992 * 120.00120 * 116.68964 * 4 2 1 6 6 C 1.37875 * 119.99522 * 296.68843 * 4 2 1 7 7 N 1.31513 * 120.00501 * 352.38401 * 6 4 2 8 8 Si 1.86806 * 119.99715 * 172.66612 * 6 4 2 9 9 H 1.48497 * 109.47165 * 264.79730 * 8 6 4 10 10 H 1.48503 * 109.46939 * 24.79275 * 8 6 4 11 11 H 1.48498 * 109.47436 * 144.79640 * 8 6 4 12 12 N 1.46497 * 109.47488 * 239.99998 * 2 1 3 13 13 C 1.34780 * 120.00312 * 84.99823 * 12 2 1 14 14 O 1.21279 * 119.99812 * 0.02562 * 13 12 2 15 15 C 1.50703 * 119.99852 * 180.02562 * 13 12 2 16 16 O 1.42898 * 109.46619 * 179.97438 * 15 13 12 17 17 C 1.35898 * 116.99860 * 179.97438 * 16 15 13 18 18 C 1.38722 * 120.04435 * 359.72553 * 17 16 15 19 19 C 1.38261 * 119.96084 * 179.78699 * 18 17 16 20 20 Cl 1.73603 * 119.98021 * 180.25228 * 19 18 17 21 21 C 1.38365 * 120.04309 * 0.47057 * 19 18 17 22 22 C 1.38371 * 120.08461 * 359.78041 * 21 19 18 23 23 Cl 1.73592 * 119.98186 * 179.97438 * 22 21 19 24 24 C 1.38270 * 120.03848 * 359.97438 * 22 21 19 25 25 H 1.08995 * 109.47232 * 297.82001 * 1 2 3 26 26 H 1.09001 * 109.47019 * 57.81936 * 1 2 3 27 27 H 1.09001 * 109.47267 * 177.81203 * 1 2 3 28 28 H 0.96997 * 120.00137 * 180.27656 * 7 6 4 29 29 H 0.97006 * 119.99727 * 264.99964 * 12 2 1 30 30 H 1.09000 * 109.46993 * 299.99949 * 15 13 12 31 31 H 1.09000 * 109.46898 * 60.00268 * 15 13 12 32 32 H 1.08003 * 120.01440 * 0.02562 * 18 17 16 33 33 H 1.07996 * 119.96134 * 179.76408 * 21 19 18 34 34 H 1.08003 * 120.01625 * 179.97438 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0323 -0.7104 1.2305 5 1 2.6083 -1.6185 1.1324 6 6 1.7564 -0.2007 2.4815 7 7 1.1871 0.9789 2.6002 8 14 2.1985 -1.1822 4.0082 9 1 1.0150 -1.9586 4.4575 10 1 3.3110 -2.1140 3.6927 11 1 2.6209 -0.2546 5.0881 12 7 2.0184 -0.6906 -1.1961 13 6 2.1471 -0.0183 -2.3571 14 8 1.8591 1.1585 -2.4115 15 6 2.6490 -0.7289 -3.5877 16 8 2.6966 0.1892 -4.6817 17 6 3.1312 -0.2949 -5.8749 18 6 3.5094 -1.6247 -5.9887 19 6 3.9470 -2.1165 -7.2045 20 17 4.4142 -3.7822 -7.3491 21 6 4.0171 -1.2808 -8.3050 22 6 3.6453 0.0472 -8.1923 23 17 3.7350 1.0935 -9.5746 24 6 3.2023 0.5414 -6.9793 25 1 -0.3633 0.4796 0.9088 26 1 -0.3633 0.5473 -0.8698 27 1 -0.3634 -1.0269 -0.0392 28 1 0.9967 1.3391 3.4805 29 1 2.2491 -1.6318 -1.1525 30 1 3.6482 -1.1214 -3.3984 31 1 1.9761 -1.5507 -3.8325 32 1 3.4583 -2.2764 -5.1289 33 1 4.3628 -1.6654 -9.2531 34 1 2.9125 1.5782 -6.8916 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000079813081.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:41:37 Heat of formation + Delta-G solvation = -67.043227 kcal Electronic energy + Delta-G solvation = -20737.088806 eV Core-core repulsion = 17108.038905 eV Total energy + Delta-G solvation = -3629.049901 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.65731 -39.05663 -37.85353 -37.14055 -36.31024 -34.86066 -32.51743 -31.27451 -30.62838 -29.63142 -27.54115 -25.29885 -23.32930 -22.91738 -21.26835 -19.65016 -18.85080 -17.63193 -16.58260 -16.45043 -16.40966 -15.87008 -15.32526 -15.20319 -14.71705 -14.42554 -14.31122 -13.66571 -13.45954 -12.87305 -12.71786 -12.60245 -12.47308 -12.01796 -11.76810 -11.72484 -11.50444 -11.31625 -11.12525 -11.07158 -10.85094 -10.78999 -10.41967 -10.33889 -9.22055 -9.18833 -9.16122 -8.68695 -8.59312 -8.09299 -6.20767 -4.28030 0.54822 0.78420 1.36362 1.85862 2.68936 3.04802 3.12940 3.20483 3.28139 3.29682 4.03030 4.31266 4.45904 4.57197 4.57838 4.67833 4.89494 5.03529 5.04042 5.13410 5.25086 5.59161 5.65297 5.72375 5.91143 6.69036 6.81776 6.94215 7.00696 7.29066 7.44108 7.59336 7.77160 7.98759 8.48668 8.68678 8.93511 9.38409 10.87362 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.020985 B = 0.002496 C = 0.002279 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1333.987515 B =11214.337387 C =12285.519153 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C 0.265 3.735 3 H 0.055 0.945 4 C -0.538 4.538 5 H 0.063 0.937 6 C 0.068 3.932 7 N -0.881 5.881 8 Si 0.901 3.099 9 H -0.279 1.279 10 H -0.273 1.273 11 H -0.285 1.285 12 N -0.703 5.703 13 C 0.503 3.497 14 O -0.530 6.530 15 C 0.035 3.965 16 O -0.275 6.275 17 C 0.165 3.835 18 C -0.202 4.202 19 C 0.018 3.982 20 Cl -0.054 7.054 21 C -0.146 4.146 22 C 0.016 3.984 23 Cl -0.050 7.050 24 C -0.139 4.139 25 H 0.079 0.921 26 H 0.019 0.981 27 H 0.029 0.971 28 H 0.266 0.734 29 H 0.390 0.610 30 H 0.093 0.907 31 H 0.092 0.908 32 H 0.148 0.852 33 H 0.145 0.855 34 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.542 -7.471 -21.499 23.425 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.203 4.203 2 C 0.164 3.836 3 H 0.073 0.927 4 C -0.576 4.576 5 H 0.081 0.919 6 C -0.136 4.136 7 N -0.517 5.517 8 Si 0.728 3.272 9 H -0.205 1.205 10 H -0.198 1.198 11 H -0.211 1.211 12 N -0.353 5.353 13 C 0.286 3.714 14 O -0.406 6.406 15 C -0.044 4.044 16 O -0.186 6.186 17 C 0.118 3.882 18 C -0.222 4.222 19 C -0.010 4.010 20 Cl -0.025 7.025 21 C -0.166 4.166 22 C -0.012 4.012 23 Cl -0.021 7.021 24 C -0.159 4.159 25 H 0.098 0.902 26 H 0.038 0.962 27 H 0.048 0.952 28 H 0.075 0.925 29 H 0.223 0.777 30 H 0.111 0.889 31 H 0.110 0.890 32 H 0.165 0.835 33 H 0.162 0.838 34 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 5.238 -6.315 -21.434 22.951 hybrid contribution 0.405 -1.324 0.824 1.611 sum 5.643 -7.639 -20.610 22.693 Atomic orbital electron populations 1.22034 0.98544 0.98900 1.00820 1.18816 0.90814 0.94460 0.79521 0.92675 1.21166 1.35742 1.10535 0.90202 0.91929 1.24894 0.94880 0.94706 0.99084 1.69964 1.41807 1.15778 1.24188 0.86453 0.78666 0.79803 0.82298 1.20505 1.19793 1.21061 1.46424 1.65254 1.13667 1.09919 1.19761 0.79831 0.87750 0.84066 1.90725 1.49788 1.15547 1.84560 1.22810 1.03057 0.92583 0.85964 1.86255 1.79587 1.37372 1.15346 1.18663 0.92472 0.90891 0.86215 1.21272 1.06773 0.95589 0.98545 1.20387 1.00092 0.86320 0.94154 1.98398 1.90398 1.15592 1.98149 1.20745 1.05054 0.91534 0.99265 1.20311 1.00985 0.91047 0.88825 1.98397 1.96692 1.65937 1.41079 1.20351 1.04641 1.01645 0.89226 0.90230 0.96172 0.95164 0.92455 0.77723 0.88948 0.89034 0.83481 0.83753 0.83094 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.43 9.32 37.16 0.35 -3.08 16 2 C 0.26 6.48 2.45 -69.08 -0.17 6.31 16 3 H 0.06 1.58 7.57 -51.93 -0.39 1.19 16 4 C -0.54 -13.75 8.69 -34.44 -0.30 -14.05 16 5 H 0.06 1.51 7.73 -52.49 -0.41 1.11 16 6 C 0.07 1.80 5.21 -17.82 -0.09 1.70 16 7 N -0.88 -24.47 11.92 55.43 0.66 -23.81 16 8 Si 0.90 20.10 29.54 -169.99 -5.02 15.07 16 9 H -0.28 -6.17 7.11 56.52 0.40 -5.76 16 10 H -0.27 -5.96 7.11 56.52 0.40 -5.56 16 11 H -0.28 -6.40 7.11 56.52 0.40 -6.00 16 12 N -0.70 -13.57 5.07 -54.93 -0.28 -13.85 16 13 C 0.50 9.48 7.87 -10.98 -0.09 9.40 16 14 O -0.53 -12.57 16.16 -14.35 -0.23 -12.80 16 15 C 0.03 0.45 5.22 36.01 0.19 0.64 16 16 O -0.27 -4.01 9.67 -39.33 -0.38 -4.39 16 17 C 0.17 1.95 6.69 -39.22 -0.26 1.69 16 18 C -0.20 -2.02 8.82 -39.39 -0.35 -2.37 16 19 C 0.02 0.17 6.32 -39.53 -0.25 -0.08 16 20 Cl -0.05 -0.46 28.95 -51.86 -1.50 -1.97 16 21 C -0.15 -1.31 9.61 -39.49 -0.38 -1.69 16 22 C 0.02 0.15 6.32 -39.52 -0.25 -0.10 16 23 Cl -0.05 -0.44 28.95 -51.86 -1.50 -1.94 16 24 C -0.14 -1.52 9.77 -39.39 -0.38 -1.91 16 25 H 0.08 2.06 6.60 -51.93 -0.34 1.72 16 26 H 0.02 0.46 8.14 -51.93 -0.42 0.03 16 27 H 0.03 0.65 8.14 -51.93 -0.42 0.23 16 28 H 0.27 6.99 8.31 -40.82 -0.34 6.65 16 29 H 0.39 6.17 8.53 -40.82 -0.35 5.82 16 30 H 0.09 0.96 7.65 -51.93 -0.40 0.56 16 31 H 0.09 0.92 7.67 -51.93 -0.40 0.53 16 32 H 0.15 1.23 6.30 -52.48 -0.33 0.90 16 33 H 0.14 1.04 8.06 -52.49 -0.42 0.62 16 34 H 0.15 1.59 8.06 -52.48 -0.42 1.16 16 LS Contribution 330.62 15.07 4.98 4.98 Total: -1.00 -30.34 330.62 -8.70 -39.04 By element: Atomic # 1 Polarization: 6.64 SS G_CDS: -3.44 Total: 3.19 kcal Atomic # 6 Polarization: -1.54 SS G_CDS: -1.99 Total: -3.53 kcal Atomic # 7 Polarization: -38.05 SS G_CDS: 0.38 Total: -37.66 kcal Atomic # 8 Polarization: -16.58 SS G_CDS: -0.61 Total: -17.19 kcal Atomic # 14 Polarization: 20.10 SS G_CDS: -5.02 Total: 15.07 kcal Atomic # 17 Polarization: -0.90 SS G_CDS: -3.00 Total: -3.91 kcal Total LS contribution 4.98 Total: 4.98 kcal Total: -30.34 -8.70 -39.04 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000079813081.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.001 kcal (2) G-P(sol) polarization free energy of solvation -30.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.342 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.701 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.042 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.043 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds