Wall clock time and date at job start Tue Mar 31 2020 11:55:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.37105 * 120.00101 * 2 1 4 4 H 1.07999 * 119.99953 * 142.82360 * 3 2 1 5 5 C 1.38943 * 119.99612 * 322.81563 * 3 2 1 6 6 N 1.31414 * 119.99618 * 158.41228 * 5 3 2 7 7 Si 1.86801 * 120.00445 * 338.41317 * 5 3 2 8 8 H 1.48503 * 109.46869 * 95.71596 * 7 5 3 9 9 H 1.48500 * 109.47458 * 215.71895 * 7 5 3 10 10 H 1.48503 * 109.47001 * 335.72011 * 7 5 3 11 11 C 1.34779 * 119.99861 * 179.97438 * 2 1 3 12 12 O 1.21293 * 119.99837 * 180.02562 * 11 2 1 13 13 C 1.50693 * 120.00070 * 0.27853 * 11 2 1 14 14 C 1.52995 * 109.47253 * 179.72210 * 13 11 2 15 15 H 1.09002 * 109.47213 * 304.99954 * 14 13 11 16 16 O 1.42904 * 109.47173 * 65.00104 * 14 13 11 17 17 C 1.50702 * 109.47324 * 184.99934 * 14 13 11 18 18 C 1.38219 * 119.99008 * 279.72826 * 17 14 13 19 19 C 1.38355 * 120.01314 * 179.72703 * 18 17 14 20 20 Cl 1.73606 * 120.00470 * 180.27320 * 19 18 17 21 21 C 1.38329 * 119.98495 * 0.56492 * 19 18 17 22 22 C 1.38327 * 119.97533 * 359.70996 * 21 19 18 23 23 Cl 1.73601 * 120.00399 * 180.02562 * 22 21 19 24 24 C 1.38223 * 119.98474 * 99.99913 * 17 14 13 25 25 H 1.08993 * 109.47081 * 265.14133 * 1 2 3 26 26 H 1.08999 * 109.46484 * 25.14241 * 1 2 3 27 27 H 1.08994 * 109.46797 * 145.13628 * 1 2 3 28 28 H 0.97004 * 119.99987 * 180.02562 * 6 5 3 29 29 H 1.09002 * 109.47298 * 299.72270 * 13 11 2 30 30 H 1.09003 * 109.46833 * 59.72298 * 13 11 2 31 31 H 0.96701 * 113.99621 * 59.99692 * 16 14 13 32 32 H 1.08002 * 119.98793 * 0.02562 * 18 17 14 33 33 H 1.08007 * 120.01095 * 179.72577 * 21 19 18 34 34 H 1.08005 * 119.99312 * 0.02562 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1505 1.1874 0.0000 4 1 3.0659 1.2824 0.5652 5 6 1.6676 2.2683 -0.7273 6 7 2.0434 3.4889 -0.4178 7 14 0.4842 1.9865 -2.1449 8 1 -0.9111 2.1584 -1.6665 9 1 0.7620 2.9680 -3.2242 10 1 0.6610 0.6091 -2.6709 11 6 2.1389 -1.1672 0.0005 12 8 3.3518 -1.1672 0.0010 13 6 1.3854 -2.4723 -0.0052 14 6 2.3796 -3.6352 -0.0104 15 1 3.0637 -3.5246 -0.8517 16 8 3.1219 -3.6326 1.2108 17 6 1.6302 -4.9362 -0.1399 18 6 1.0335 -5.5033 0.9704 19 6 0.3406 -6.6949 0.8509 20 17 -0.4148 -7.4034 2.2442 21 6 0.2550 -7.3246 -0.3778 22 6 0.8572 -6.7595 -1.4875 23 17 0.7497 -7.5488 -3.0299 24 6 1.5446 -5.5648 -1.3680 25 1 -0.3633 -0.0870 1.0239 26 1 -0.3632 0.9303 -0.4366 27 1 -0.3633 -0.8432 -0.5874 28 1 1.7060 4.2436 -0.9253 29 1 0.7587 -2.5340 0.8845 30 1 0.7588 -2.5260 -0.8955 31 1 2.5758 -3.7275 2.0032 32 1 1.1041 -5.0137 1.9304 33 1 -0.2821 -8.2571 -0.4707 34 1 2.0152 -5.1236 -2.2343 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000091234096.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:27 Heat of formation + Delta-G solvation = -60.228794 kcal Electronic energy + Delta-G solvation = -21550.228738 eV Core-core repulsion = 17921.474333 eV Total energy + Delta-G solvation = -3628.754405 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -40.25470 -38.79259 -37.17352 -37.08908 -36.20749 -34.72077 -32.32364 -31.96890 -30.97124 -29.80948 -26.49404 -25.58668 -23.81469 -23.16489 -21.44128 -19.04336 -18.04767 -17.06805 -16.58030 -16.34691 -16.05317 -15.74082 -15.38919 -15.11348 -14.65576 -14.39375 -13.82745 -13.76061 -13.44650 -12.68388 -12.66824 -12.53855 -12.48677 -12.35532 -12.13146 -11.86151 -11.63710 -11.43324 -11.35465 -11.29384 -10.90930 -10.79385 -10.41141 -10.10828 -9.94358 -9.21252 -9.09077 -9.08315 -8.49114 -7.74908 -6.40519 -3.97522 0.62335 0.66899 1.45943 1.91677 3.00407 3.03298 3.19678 3.22917 3.70915 4.04475 4.13540 4.44018 4.48713 4.60855 4.63420 4.79667 4.89060 4.96620 5.10950 5.13897 5.35901 5.60131 5.63984 5.64898 5.73600 5.78689 5.88731 6.07385 6.13800 6.24062 6.24864 7.52890 7.72051 8.27599 8.49589 8.96297 9.30806 9.76244 10.71788 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.016426 B = 0.003429 C = 0.003169 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1704.207137 B = 8162.831760 C = 8832.581634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.473 5.473 3 C -0.316 4.316 4 H 0.106 0.894 5 C 0.058 3.942 6 N -0.865 5.865 7 Si 0.880 3.120 8 H -0.276 1.276 9 H -0.288 1.288 10 H -0.266 1.266 11 C 0.465 3.535 12 O -0.549 6.549 13 C -0.168 4.168 14 C 0.168 3.832 15 H 0.120 0.880 16 O -0.530 6.530 17 C -0.082 4.082 18 C -0.099 4.099 19 C -0.020 4.020 20 Cl -0.058 7.058 21 C -0.108 4.108 22 C -0.021 4.021 23 Cl -0.058 7.058 24 C -0.095 4.095 25 H 0.050 0.950 26 H 0.065 0.935 27 H 0.052 0.948 28 H 0.274 0.726 29 H 0.085 0.915 30 H 0.091 0.909 31 H 0.365 0.635 32 H 0.140 0.860 33 H 0.143 0.857 34 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.556 -22.043 -0.054 23.645 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 N -0.196 5.196 3 C -0.443 4.443 4 H 0.123 0.877 5 C -0.147 4.147 6 N -0.501 5.501 7 Si 0.708 3.292 8 H -0.204 1.204 9 H -0.215 1.215 10 H -0.190 1.190 11 C 0.252 3.748 12 O -0.429 6.429 13 C -0.208 4.208 14 C 0.108 3.892 15 H 0.138 0.862 16 O -0.334 6.334 17 C -0.084 4.084 18 C -0.118 4.118 19 C -0.047 4.047 20 Cl -0.029 7.029 21 C -0.127 4.127 22 C -0.048 4.048 23 Cl -0.029 7.029 24 C -0.114 4.114 25 H 0.069 0.931 26 H 0.084 0.916 27 H 0.071 0.929 28 H 0.084 0.916 29 H 0.104 0.896 30 H 0.110 0.890 31 H 0.211 0.789 32 H 0.158 0.842 33 H 0.161 0.839 34 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -7.506 -21.873 -0.510 23.131 hybrid contribution -1.550 -0.177 -0.489 1.635 sum -9.056 -22.050 -0.999 23.858 Atomic orbital electron populations 1.21989 0.83625 1.01518 1.00863 1.43679 1.03875 1.05751 1.66311 1.19062 1.10145 0.85471 1.29665 0.87686 1.25368 0.97469 0.94790 0.97108 1.69759 1.43924 0.98085 1.38360 0.86924 0.80185 0.78928 0.83159 1.20358 1.21453 1.19003 1.19968 0.88204 0.84316 0.82265 1.90613 1.13465 1.86632 1.52174 1.22427 0.99313 0.95065 1.04029 1.20576 0.92028 0.86679 0.89902 0.86210 1.86817 1.36225 1.95828 1.14502 1.20757 0.97275 0.97905 0.92419 1.20922 0.96671 0.94296 0.99864 1.20666 0.99853 0.95574 0.88589 1.98393 1.80424 1.83463 1.40664 1.20868 1.00881 1.01094 0.89880 1.20711 1.01477 0.95240 0.87329 1.98393 1.97097 1.79827 1.27604 1.21079 0.98399 0.93419 0.98506 0.93110 0.91632 0.92897 0.91607 0.89639 0.89045 0.78860 0.84218 0.83901 0.83805 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 1.20 8.79 59.85 0.53 1.73 16 2 N -0.47 -11.16 2.59 -122.20 -0.32 -11.48 16 3 C -0.32 -8.92 9.37 -14.93 -0.14 -9.06 16 4 H 0.11 3.35 7.90 -52.49 -0.41 2.94 16 5 C 0.06 1.60 5.29 -17.47 -0.09 1.51 16 6 N -0.86 -24.97 13.96 55.50 0.77 -24.20 16 7 Si 0.88 20.28 24.96 -169.99 -4.24 16.04 16 8 H -0.28 -5.90 6.69 56.52 0.38 -5.52 16 9 H -0.29 -6.70 7.11 56.52 0.40 -6.30 16 10 H -0.27 -6.01 7.11 56.52 0.40 -5.60 16 11 C 0.46 10.25 7.51 -10.99 -0.08 10.17 16 12 O -0.55 -14.41 15.28 -8.88 -0.14 -14.54 16 13 C -0.17 -2.52 3.98 -27.89 -0.11 -2.63 16 14 C 0.17 2.34 2.75 -27.88 -0.08 2.26 16 15 H 0.12 1.84 7.82 -51.93 -0.41 1.43 16 16 O -0.53 -8.05 12.42 -49.66 -0.62 -8.66 16 17 C -0.08 -0.91 4.97 -104.63 -0.52 -1.43 16 18 C -0.10 -0.96 9.11 -39.55 -0.36 -1.32 16 19 C -0.02 -0.19 6.32 -39.50 -0.25 -0.44 16 20 Cl -0.06 -0.51 28.96 -51.86 -1.50 -2.01 16 21 C -0.11 -0.98 9.61 -39.52 -0.38 -1.36 16 22 C -0.02 -0.20 6.32 -39.51 -0.25 -0.45 16 23 Cl -0.06 -0.53 28.96 -51.86 -1.50 -2.03 16 24 C -0.10 -0.99 9.45 -39.54 -0.37 -1.36 16 25 H 0.05 0.84 8.14 -51.93 -0.42 0.42 16 26 H 0.07 1.33 3.42 -51.93 -0.18 1.15 16 27 H 0.05 0.81 6.63 -51.93 -0.34 0.47 16 28 H 0.27 7.29 8.31 -40.82 -0.34 6.95 16 29 H 0.09 1.08 8.11 -51.93 -0.42 0.66 16 30 H 0.09 1.23 7.40 -51.93 -0.38 0.84 16 31 H 0.36 4.02 7.50 45.56 0.34 4.36 16 32 H 0.14 1.14 6.77 -52.49 -0.36 0.78 16 33 H 0.14 1.07 8.06 -52.48 -0.42 0.65 16 34 H 0.14 1.37 8.04 -52.48 -0.42 0.94 16 LS Contribution 319.61 15.07 4.82 4.82 Total: -1.00 -32.86 319.61 -7.42 -40.28 By element: Atomic # 1 Polarization: 6.76 SS G_CDS: -2.59 Total: 4.17 kcal Atomic # 6 Polarization: -0.28 SS G_CDS: -2.11 Total: -2.39 kcal Atomic # 7 Polarization: -36.13 SS G_CDS: 0.46 Total: -35.67 kcal Atomic # 8 Polarization: -22.45 SS G_CDS: -0.75 Total: -23.20 kcal Atomic # 14 Polarization: 20.28 SS G_CDS: -4.24 Total: 16.04 kcal Atomic # 17 Polarization: -1.04 SS G_CDS: -3.00 Total: -4.04 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -32.86 -7.42 -40.28 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000091234096.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.949 kcal (2) G-P(sol) polarization free energy of solvation -32.858 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.807 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.280 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.229 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds