Wall clock time and date at job start Tue Mar 31 2020 11:57:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45196 * 1 3 3 C 1.34225 * 117.00166 * 2 1 4 4 O 1.20827 * 120.00058 * 0.02562 * 3 2 1 5 5 C 1.50695 * 120.00231 * 179.97438 * 3 2 1 6 6 N 1.46495 * 109.47566 * 180.02562 * 5 3 2 7 7 C 1.36941 * 120.00286 * 262.87183 * 6 5 3 8 8 H 1.07999 * 119.99844 * 143.00696 * 7 6 5 9 9 C 1.38809 * 119.99691 * 323.00359 * 7 6 5 10 10 N 1.31617 * 120.00113 * 156.12154 * 9 7 6 11 11 Si 1.86800 * 120.00254 * 336.12495 * 9 7 6 12 12 H 1.48501 * 109.47254 * 95.19933 * 11 9 7 13 13 H 1.48500 * 109.47252 * 215.19686 * 11 9 7 14 14 H 1.48503 * 109.47082 * 335.19824 * 11 9 7 15 15 C 1.46499 * 120.00010 * 82.86564 * 6 5 3 16 16 C 1.50702 * 109.47276 * 90.00241 * 15 6 5 17 17 C 1.38222 * 119.98855 * 269.72729 * 16 15 6 18 18 C 1.38356 * 120.01369 * 179.76564 * 17 16 15 19 19 Cl 1.73595 * 120.00917 * 180.27695 * 18 17 16 20 20 C 1.38333 * 119.98445 * 0.52852 * 18 17 16 21 21 C 1.38331 * 119.97447 * 359.72380 * 20 18 17 22 22 Cl 1.73602 * 120.00659 * 179.97438 * 21 20 18 23 23 C 1.38221 * 119.98397 * 89.99952 * 16 15 6 24 24 H 1.09006 * 109.47160 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47117 * 299.99393 * 1 2 3 26 26 H 1.09006 * 109.47294 * 59.99649 * 1 2 3 27 27 H 1.08999 * 109.47533 * 300.00854 * 5 3 2 28 28 H 1.09002 * 109.47336 * 60.00550 * 5 3 2 29 29 H 0.96999 * 120.00733 * 180.02562 * 10 9 7 30 30 H 1.09004 * 109.47636 * 210.00305 * 15 6 5 31 31 H 1.09000 * 109.47367 * 330.00497 * 15 6 5 32 32 H 1.07999 * 119.98809 * 359.97438 * 17 16 15 33 33 H 1.08003 * 120.01381 * 179.70153 * 20 18 17 34 34 H 1.07998 * 119.99603 * 359.97438 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5663 1.2748 0.0006 6 7 3.9817 2.6796 0.0011 7 6 4.3175 3.2948 -1.1754 8 1 4.0532 4.3292 -1.3384 9 6 4.9974 2.5889 -2.1583 10 7 4.9179 2.9691 -3.4158 11 14 6.0254 1.0991 -1.6963 12 1 5.2175 -0.1342 -1.8742 13 1 7.2248 1.0353 -2.5694 14 1 6.4509 1.2119 -0.2780 15 6 4.0379 3.4264 1.2602 16 6 5.4090 3.2827 1.8688 17 6 5.6705 2.2468 2.7458 18 6 6.9305 2.1115 3.3011 19 17 7.2608 0.8063 4.3969 20 6 7.9256 3.0197 2.9869 21 6 7.6618 4.0592 2.1132 22 17 8.9098 5.1997 1.7189 23 6 6.4030 4.1902 1.5541 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3633 0.5138 0.8901 26 1 -0.3634 0.5139 -0.8900 27 1 3.9557 0.7808 0.8907 28 1 3.9564 0.7806 -0.8892 29 1 5.3927 2.4757 -4.1028 30 1 3.8346 4.4798 1.0673 31 1 3.2912 3.0327 1.9498 32 1 4.8920 1.5409 2.9949 33 1 8.9080 2.9173 3.4239 34 1 6.1970 5.0017 0.8720 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000093562311.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:57:57 Heat of formation + Delta-G solvation = -47.393702 kcal Electronic energy + Delta-G solvation = -22109.516387 eV Core-core repulsion = 18481.318553 eV Total energy + Delta-G solvation = -3628.197834 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -39.79264 -39.27711 -36.69644 -36.61193 -36.01442 -35.19440 -32.28317 -31.11836 -30.41454 -28.60165 -26.66645 -26.02382 -22.70516 -22.54415 -21.14922 -20.19301 -17.37978 -17.15172 -16.85150 -16.14795 -15.68680 -15.60534 -15.49376 -14.96747 -14.49012 -14.17155 -13.64018 -13.46094 -13.17967 -12.87164 -12.67750 -12.39486 -12.22459 -11.88063 -11.76266 -11.66370 -11.41473 -11.05998 -10.86782 -10.84242 -10.71630 -10.64919 -10.40852 -10.29086 -9.86690 -9.74042 -8.83440 -8.57544 -8.51519 -7.27014 -6.23522 -3.66775 1.22919 1.29262 1.93958 2.42347 2.93508 3.13878 3.25891 3.35979 3.39260 3.68022 4.30053 4.76951 4.87326 5.07914 5.15459 5.24095 5.38121 5.43258 5.44788 5.49429 5.53268 5.74963 5.79316 5.88132 5.96350 6.04703 6.18219 6.32300 6.43290 6.73260 6.83472 6.95991 7.69830 8.12692 8.44317 8.69005 9.41414 9.73893 10.90158 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.011730 B = 0.005489 C = 0.004480 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2386.480485 B = 5099.795356 C = 6249.152737 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.376 6.376 3 C 0.429 3.571 4 O -0.495 6.495 5 C 0.139 3.861 6 N -0.561 5.561 7 C -0.276 4.276 8 H 0.088 0.912 9 C 0.046 3.954 10 N -0.879 5.879 11 Si 0.855 3.145 12 H -0.280 1.280 13 H -0.292 1.292 14 H -0.257 1.257 15 C 0.183 3.817 16 C -0.059 4.059 17 C -0.105 4.105 18 C -0.026 4.026 19 Cl -0.074 7.074 20 C -0.119 4.119 21 C -0.024 4.024 22 Cl -0.070 7.070 23 C -0.080 4.080 24 H 0.090 0.910 25 H 0.055 0.945 26 H 0.057 0.943 27 H 0.081 0.919 28 H 0.101 0.899 29 H 0.268 0.732 30 H 0.076 0.924 31 H 0.060 0.940 32 H 0.132 0.868 33 H 0.136 0.864 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.655 -3.166 12.909 13.395 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.293 6.293 3 C 0.268 3.732 4 O -0.380 6.380 5 C 0.010 3.990 6 N -0.279 5.279 7 C -0.404 4.404 8 H 0.105 0.895 9 C -0.158 4.158 10 N -0.517 5.517 11 Si 0.683 3.317 12 H -0.208 1.208 13 H -0.220 1.220 14 H -0.181 1.181 15 C 0.058 3.942 16 C -0.063 4.063 17 C -0.125 4.125 18 C -0.053 4.053 19 Cl -0.046 7.046 20 C -0.139 4.139 21 C -0.051 4.051 22 Cl -0.041 7.041 23 C -0.099 4.099 24 H 0.109 0.891 25 H 0.074 0.926 26 H 0.076 0.924 27 H 0.099 0.901 28 H 0.119 0.881 29 H 0.078 0.922 30 H 0.095 0.905 31 H 0.078 0.922 32 H 0.150 0.850 33 H 0.154 0.846 34 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 1.600 -2.845 12.744 13.155 hybrid contribution 0.644 -0.972 -0.020 1.166 sum 2.243 -3.817 12.725 13.473 Atomic orbital electron populations 1.23085 0.78425 1.02521 1.01956 1.86610 1.22150 1.35628 1.84880 1.26353 0.94070 0.80882 0.71918 1.90573 1.66785 1.36358 1.44268 1.21263 0.85314 0.89072 1.03322 1.43853 1.72564 1.07973 1.03554 1.18799 1.32286 0.98871 0.90455 0.89488 1.25480 0.97216 0.97918 0.95137 1.69874 1.41200 1.41202 0.99467 0.87245 0.81449 0.83077 0.79960 1.20756 1.21958 1.18102 1.20076 0.88824 0.98401 0.86920 1.20972 0.99561 0.92682 0.93091 1.21036 0.95175 0.98868 0.97406 1.20651 0.95177 0.92143 0.97287 1.98351 1.95649 1.48140 1.62423 1.20690 0.99464 0.94114 0.99651 1.20755 0.90624 0.93536 1.00135 1.98360 1.52855 1.59684 1.93212 1.21145 0.90344 1.00322 0.98114 0.89120 0.92644 0.92405 0.90097 0.88135 0.92178 0.90528 0.92211 0.84998 0.84628 0.83898 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.47 10.56 101.05 1.07 1.54 16 2 O -0.38 -6.62 10.56 -39.24 -0.41 -7.04 16 3 C 0.43 8.66 8.00 36.00 0.29 8.95 16 4 O -0.49 -11.18 16.10 -18.75 -0.30 -11.48 16 5 C 0.14 2.83 4.87 -5.20 -0.03 2.81 16 6 N -0.56 -12.17 1.58 -175.99 -0.28 -12.45 16 7 C -0.28 -7.10 9.90 -15.06 -0.15 -7.25 16 8 H 0.09 2.44 8.06 -52.49 -0.42 2.02 16 9 C 0.05 1.23 5.23 -17.43 -0.09 1.13 16 10 N -0.88 -25.35 13.97 55.49 0.78 -24.58 16 11 Si 0.85 20.29 25.15 -169.99 -4.28 16.02 16 12 H -0.28 -6.41 6.66 56.52 0.38 -6.04 16 13 H -0.29 -7.18 7.11 56.52 0.40 -6.78 16 14 H -0.26 -5.92 7.11 56.52 0.40 -5.52 16 15 C 0.18 3.28 5.71 -5.19 -0.03 3.25 16 16 C -0.06 -0.99 5.46 -104.63 -0.57 -1.56 16 17 C -0.11 -1.60 9.48 -39.54 -0.38 -1.97 16 18 C -0.03 -0.37 6.32 -39.50 -0.25 -0.62 16 19 Cl -0.07 -0.95 28.96 -51.86 -1.50 -2.45 16 20 C -0.12 -1.71 9.62 -39.51 -0.38 -2.09 16 21 C -0.02 -0.36 6.32 -39.50 -0.25 -0.61 16 22 Cl -0.07 -0.99 28.96 -51.86 -1.50 -2.49 16 23 C -0.08 -1.32 9.48 -39.54 -0.38 -1.69 16 24 H 0.09 0.92 8.14 -51.93 -0.42 0.50 16 25 H 0.05 0.71 8.13 -51.93 -0.42 0.29 16 26 H 0.06 0.82 8.13 -51.93 -0.42 0.40 16 27 H 0.08 1.39 8.12 -51.93 -0.42 0.97 16 28 H 0.10 2.23 3.69 -51.93 -0.19 2.04 16 29 H 0.27 7.33 8.31 -40.82 -0.34 6.99 16 30 H 0.08 1.36 7.98 -51.93 -0.41 0.95 16 31 H 0.06 0.97 8.01 -51.93 -0.42 0.55 16 32 H 0.13 1.79 8.06 -52.49 -0.42 1.36 16 33 H 0.14 1.68 8.06 -52.48 -0.42 1.26 16 34 H 0.14 2.38 8.06 -52.49 -0.42 1.95 16 LS Contribution 329.86 15.07 4.97 4.97 Total: -1.00 -29.45 329.86 -7.23 -36.68 By element: Atomic # 1 Polarization: 4.50 SS G_CDS: -3.56 Total: 0.94 kcal Atomic # 6 Polarization: 3.02 SS G_CDS: -1.14 Total: 1.88 kcal Atomic # 7 Polarization: -37.52 SS G_CDS: 0.50 Total: -37.03 kcal Atomic # 8 Polarization: -17.80 SS G_CDS: -0.72 Total: -18.52 kcal Atomic # 14 Polarization: 20.29 SS G_CDS: -4.28 Total: 16.02 kcal Atomic # 17 Polarization: -1.94 SS G_CDS: -3.00 Total: -4.94 kcal Total LS contribution 4.97 Total: 4.97 kcal Total: -29.45 -7.23 -36.68 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000093562311.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.716 kcal (2) G-P(sol) polarization free energy of solvation -29.446 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.162 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.232 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds