Wall clock time and date at job start Tue Mar 31 2020 11:58:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45208 * 1 3 3 C 1.34223 * 116.99731 * 2 1 4 4 O 1.20827 * 120.00332 * 0.02562 * 3 2 1 5 5 C 1.50706 * 119.99720 * 180.02562 * 3 2 1 6 6 N 1.46503 * 109.47052 * 180.02562 * 5 3 2 7 7 C 1.36933 * 120.00291 * 84.46536 * 6 5 3 8 8 H 1.08003 * 119.99782 * 319.67092 * 7 6 5 9 9 C 1.38807 * 119.99686 * 139.39174 * 7 6 5 10 10 N 1.31627 * 119.99768 * 162.98137 * 9 7 6 11 11 Si 1.86798 * 120.00286 * 342.98031 * 9 7 6 12 12 H 1.48494 * 109.47314 * 93.32170 * 11 9 7 13 13 H 1.48500 * 109.46947 * 213.32362 * 11 9 7 14 14 H 1.48501 * 109.47296 * 333.32210 * 11 9 7 15 15 C 1.46502 * 119.99751 * 264.46565 * 6 5 3 16 16 C 1.50707 * 109.47100 * 83.44802 * 15 6 5 17 17 C 1.38251 * 119.99884 * 263.01477 * 16 15 6 18 18 C 1.38226 * 120.03594 * 179.76852 * 17 16 15 19 19 C 1.38247 * 120.03484 * 0.50651 * 18 17 16 20 20 C 1.38301 * 120.00358 * 359.74688 * 19 18 17 21 21 Cl 1.73600 * 120.02170 * 179.97438 * 20 19 18 22 22 C 1.38302 * 119.99982 * 83.28864 * 16 15 6 23 23 Cl 1.73606 * 120.01671 * 359.97438 * 22 16 15 24 24 H 1.08998 * 109.47293 * 299.99942 * 1 2 3 25 25 H 1.08998 * 109.47310 * 60.00296 * 1 2 3 26 26 H 1.09000 * 109.46940 * 180.02562 * 1 2 3 27 27 H 1.09001 * 109.47205 * 59.99840 * 5 3 2 28 28 H 1.08998 * 109.46805 * 299.99422 * 5 3 2 29 29 H 0.96998 * 119.99881 * 179.97438 * 10 9 7 30 30 H 1.08989 * 109.47281 * 203.44860 * 15 6 5 31 31 H 1.09005 * 109.46728 * 323.45032 * 15 6 5 32 32 H 1.07997 * 119.98259 * 0.02562 * 17 16 15 33 33 H 1.08001 * 119.98006 * 180.27111 * 18 17 16 34 34 H 1.08001 * 119.99605 * 179.76753 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 0.0005 5 6 3.5664 1.2748 -0.0006 6 7 3.9817 2.6797 0.0002 7 6 4.0667 3.3680 1.1809 8 1 3.3145 3.2277 1.9431 9 6 5.1227 4.2417 1.4004 10 7 5.0443 5.1415 2.3580 11 14 6.6552 4.1407 0.3370 12 1 6.5296 5.0837 -0.8031 13 1 7.8455 4.5008 1.1487 14 1 6.8087 2.7570 -0.1798 15 6 4.3062 3.3483 -1.2624 16 6 3.0377 3.8391 -1.9114 17 6 2.4273 3.0834 -2.8951 18 6 1.2613 3.5306 -3.4875 19 6 0.7098 4.7390 -3.1043 20 6 1.3220 5.4988 -2.1242 21 17 0.6303 7.0167 -1.6432 22 6 2.4874 5.0483 -1.5269 23 17 3.2570 6.0007 -0.2963 24 1 -0.3634 0.5138 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 3.9558 0.7809 -0.8908 28 1 3.9564 0.7806 0.8892 29 1 5.7824 5.7518 2.5116 30 1 4.9651 4.1942 -1.0668 31 1 4.8062 2.6446 -1.9281 32 1 2.8595 2.1412 -3.1979 33 1 0.7828 2.9374 -4.2527 34 1 -0.1993 5.0896 -3.5703 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000093562589.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:58:00 Heat of formation + Delta-G solvation = -36.790804 kcal Electronic energy + Delta-G solvation = -23101.525523 eV Core-core repulsion = 19473.787466 eV Total energy + Delta-G solvation = -3627.738058 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -39.73029 -38.99888 -36.52310 -35.97211 -35.50587 -35.15498 -31.93448 -31.12467 -30.10225 -28.52778 -26.61121 -25.75110 -22.54013 -22.26933 -21.18006 -19.98177 -17.38779 -16.85623 -16.52368 -16.01448 -15.85026 -15.58861 -15.32430 -14.88264 -14.10227 -13.67286 -13.49751 -13.25527 -13.14597 -12.84685 -12.51759 -12.34897 -11.75623 -11.57424 -11.54386 -11.27291 -11.18788 -10.95969 -10.73355 -10.69946 -10.45422 -10.25283 -10.01007 -9.82523 -9.75766 -9.68582 -8.55909 -8.33830 -8.03991 -7.09131 -6.03004 -3.53409 1.46798 1.58167 2.40443 3.03196 3.06810 3.23885 3.33055 3.40818 3.43105 3.90183 4.44076 4.89821 5.02773 5.15216 5.26563 5.38362 5.44624 5.45831 5.54496 5.59006 5.67887 5.80904 5.87172 6.00671 6.09140 6.19890 6.33867 6.42615 6.57313 6.81713 7.01465 7.05763 7.88976 8.23268 8.60644 8.82027 9.59371 9.88225 11.10153 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.009982 B = 0.009288 C = 0.005893 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2804.454015 B = 3014.080960 C = 4750.023013 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.377 6.377 3 C 0.416 3.584 4 O -0.479 6.479 5 C 0.158 3.842 6 N -0.562 5.562 7 C -0.268 4.268 8 H 0.079 0.921 9 C 0.059 3.941 10 N -0.884 5.884 11 Si 0.862 3.138 12 H -0.279 1.279 13 H -0.298 1.298 14 H -0.265 1.265 15 C 0.154 3.846 16 C -0.060 4.060 17 C -0.108 4.108 18 C -0.114 4.114 19 C -0.116 4.116 20 C -0.033 4.033 21 Cl -0.069 7.069 22 C -0.007 4.007 23 Cl -0.006 7.006 24 H 0.055 0.945 25 H 0.053 0.947 26 H 0.089 0.911 27 H 0.083 0.917 28 H 0.102 0.898 29 H 0.264 0.736 30 H 0.083 0.917 31 H 0.056 0.944 32 H 0.122 0.878 33 H 0.124 0.876 34 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.885 -5.755 -10.960 13.707 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 O -0.295 6.295 3 C 0.254 3.746 4 O -0.362 6.362 5 C 0.029 3.971 6 N -0.280 5.280 7 C -0.396 4.396 8 H 0.097 0.903 9 C -0.143 4.143 10 N -0.524 5.524 11 Si 0.692 3.308 12 H -0.207 1.207 13 H -0.226 1.226 14 H -0.189 1.189 15 C 0.029 3.971 16 C -0.064 4.064 17 C -0.127 4.127 18 C -0.132 4.132 19 C -0.136 4.136 20 C -0.061 4.061 21 Cl -0.040 7.040 22 C -0.036 4.036 23 Cl 0.024 6.976 24 H 0.074 0.926 25 H 0.072 0.928 26 H 0.107 0.893 27 H 0.101 0.899 28 H 0.120 0.880 29 H 0.074 0.926 30 H 0.101 0.899 31 H 0.074 0.926 32 H 0.140 0.860 33 H 0.142 0.858 34 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges -5.972 -5.053 -10.634 13.201 hybrid contribution 0.221 0.392 -0.379 0.588 sum -5.750 -4.662 -11.013 13.269 Atomic orbital electron populations 1.23020 0.78550 1.02248 1.01870 1.86566 1.21934 1.35755 1.85229 1.26366 0.94520 0.80906 0.72814 1.90668 1.66606 1.36036 1.42920 1.20521 0.85235 0.87982 1.03403 1.43947 1.76051 1.05517 1.02471 1.18618 1.06401 1.22217 0.92359 0.90306 1.25286 0.96894 0.96422 0.95686 1.69826 1.31802 1.17890 1.32834 0.87163 0.84555 0.78876 0.80222 1.20700 1.22616 1.18934 1.20684 0.91456 0.97460 0.87527 1.20693 1.00136 0.91543 0.94029 1.20955 0.95869 0.99444 0.96437 1.20921 0.96200 0.95700 1.00428 1.20762 1.00354 0.95056 0.97404 1.20754 0.95503 0.89987 0.99847 1.98344 1.83995 1.30291 1.91370 1.20811 0.93994 0.94690 0.94096 1.98490 1.79005 1.70375 1.49763 0.92620 0.92797 0.89299 0.89911 0.88041 0.92628 0.89919 0.92600 0.85957 0.85757 0.85361 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.50 10.56 101.05 1.07 1.57 16 2 O -0.38 -6.09 10.57 -39.24 -0.41 -6.51 16 3 C 0.42 7.81 7.99 36.01 0.29 8.10 16 4 O -0.48 -10.65 14.88 -18.75 -0.28 -10.93 16 5 C 0.16 2.86 6.30 -5.19 -0.03 2.82 16 6 N -0.56 -12.30 1.60 -175.98 -0.28 -12.58 16 7 C -0.27 -6.96 8.58 -15.06 -0.13 -7.09 16 8 H 0.08 2.35 8.06 -52.48 -0.42 1.93 16 9 C 0.06 1.58 3.70 -17.43 -0.06 1.52 16 10 N -0.88 -25.25 13.97 55.49 0.78 -24.48 16 11 Si 0.86 20.51 24.89 -169.99 -4.23 16.28 16 12 H -0.28 -6.53 6.66 56.52 0.38 -6.15 16 13 H -0.30 -7.31 7.11 56.52 0.40 -6.91 16 14 H -0.26 -5.94 7.11 56.52 0.40 -5.54 16 15 C 0.15 3.14 3.90 -5.19 -0.02 3.12 16 16 C -0.06 -1.17 4.37 -104.59 -0.46 -1.63 16 17 C -0.11 -1.73 9.57 -39.58 -0.38 -2.11 16 18 C -0.11 -1.65 10.04 -39.58 -0.40 -2.05 16 19 C -0.12 -1.82 9.83 -39.56 -0.39 -2.21 16 20 C -0.03 -0.62 6.32 -39.47 -0.25 -0.87 16 21 Cl -0.07 -1.20 27.96 -51.86 -1.45 -2.65 16 22 C -0.01 -0.15 6.32 -39.47 -0.25 -0.40 16 23 Cl -0.01 -0.14 23.50 -51.86 -1.22 -1.36 16 24 H 0.06 0.78 8.13 -51.93 -0.42 0.36 16 25 H 0.05 0.71 8.13 -51.93 -0.42 0.29 16 26 H 0.09 0.86 8.14 -51.93 -0.42 0.44 16 27 H 0.08 1.21 7.90 -51.93 -0.41 0.80 16 28 H 0.10 1.75 8.08 -51.93 -0.42 1.33 16 29 H 0.26 7.25 8.31 -40.82 -0.34 6.92 16 30 H 0.08 1.87 2.65 -51.93 -0.14 1.73 16 31 H 0.06 0.97 7.86 -51.93 -0.41 0.56 16 32 H 0.12 1.65 8.06 -52.49 -0.42 1.23 16 33 H 0.12 1.38 8.06 -52.49 -0.42 0.96 16 34 H 0.13 1.65 8.06 -52.49 -0.42 1.23 16 LS Contribution 317.16 15.07 4.78 4.78 Total: -1.00 -30.69 317.16 -6.83 -37.52 By element: Atomic # 1 Polarization: 2.65 SS G_CDS: -3.49 Total: -0.84 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: -1.01 Total: 0.77 kcal Atomic # 7 Polarization: -37.55 SS G_CDS: 0.49 Total: -37.06 kcal Atomic # 8 Polarization: -16.75 SS G_CDS: -0.69 Total: -17.44 kcal Atomic # 14 Polarization: 20.51 SS G_CDS: -4.23 Total: 16.28 kcal Atomic # 17 Polarization: -1.34 SS G_CDS: -2.67 Total: -4.01 kcal Total LS contribution 4.78 Total: 4.78 kcal Total: -30.69 -6.83 -37.52 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000093562589.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.724 kcal (2) G-P(sol) polarization free energy of solvation -30.687 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.828 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.515 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.791 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds