Wall clock time and date at job start Tue Mar 31 2020 11:41:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 H 1.08998 * 109.47533 * 2 1 4 4 C 1.50697 * 109.47466 * 120.00144 * 2 1 3 5 5 H 1.07998 * 120.00039 * 119.99581 * 4 2 1 6 6 C 1.37880 * 119.99815 * 300.00179 * 4 2 1 7 7 N 1.31508 * 119.99915 * 359.97438 * 6 4 2 8 8 Si 1.86805 * 119.99777 * 179.97438 * 6 4 2 9 9 H 1.48501 * 109.47152 * 359.97438 * 8 6 4 10 10 H 1.48494 * 109.47204 * 119.99883 * 8 6 4 11 11 H 1.48496 * 109.47191 * 240.00215 * 8 6 4 12 12 N 1.46506 * 109.47289 * 240.00326 * 2 1 3 13 13 C 1.34777 * 120.00033 * 84.99600 * 12 2 1 14 14 O 1.21287 * 119.99681 * 0.02562 * 13 12 2 15 15 C 1.50696 * 120.00198 * 180.02562 * 13 12 2 16 16 H 1.09001 * 109.46698 * 55.00116 * 15 13 12 17 17 O 1.42899 * 109.47365 * 174.99894 * 15 13 12 18 18 C 1.50695 * 109.47245 * 295.00458 * 15 13 12 19 19 C 1.38219 * 119.98643 * 279.72212 * 18 15 13 20 20 C 1.38363 * 120.01463 * 179.72408 * 19 18 15 21 21 Cl 1.73598 * 120.00845 * 180.27421 * 20 19 18 22 22 C 1.38331 * 119.98475 * 0.57358 * 20 19 18 23 23 C 1.38331 * 119.97497 * 359.70082 * 22 20 19 24 24 Cl 1.73602 * 120.01020 * 180.02562 * 23 22 20 25 25 C 1.38222 * 119.98980 * 99.99737 * 18 15 13 26 26 H 1.09002 * 109.47153 * 299.99629 * 1 2 3 27 27 H 1.09001 * 109.46832 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.47261 * 59.99801 * 1 2 3 29 29 H 0.97001 * 119.99839 * 180.02562 * 7 6 4 30 30 H 0.96992 * 120.00062 * 265.00053 * 12 2 1 31 31 H 0.96701 * 113.99566 * 60.00119 * 17 15 13 32 32 H 1.08002 * 119.99120 * 0.02562 * 19 18 15 33 33 H 1.08005 * 120.01389 * 179.72361 * 22 20 19 34 34 H 1.08005 * 119.99377 * 359.97438 * 25 18 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8934 1.0276 0.0000 4 6 2.0324 -0.7104 1.2304 5 1 2.6532 -1.5885 1.1313 6 6 1.6993 -0.2394 2.4827 7 7 0.9436 0.8301 2.6034 8 14 2.3215 -1.1204 4.0079 9 1 3.1456 -2.2878 3.6036 10 1 3.1467 -0.1875 4.8164 11 1 1.1663 -1.5869 4.8160 12 7 2.0184 -0.6906 -1.1962 13 6 2.1470 -0.0182 -2.3572 14 8 1.8589 1.1587 -2.4114 15 6 2.6488 -0.7286 -3.5878 16 1 2.0274 -1.6029 -3.7813 17 8 2.5871 0.1570 -4.7076 18 6 4.0749 -1.1643 -3.3700 19 6 5.1057 -0.2561 -3.5225 20 6 6.4148 -0.6541 -3.3170 21 17 7.7087 0.4884 -3.5017 22 6 6.6928 -1.9641 -2.9705 23 6 5.6613 -2.8740 -2.8235 24 17 6.0091 -4.5181 -2.3880 25 6 4.3521 -2.4733 -3.0232 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5139 -0.8900 29 1 0.7096 1.1617 3.4844 30 1 2.2491 -1.6316 -1.1527 31 1 3.1178 0.9588 -4.6046 32 1 4.8888 0.7656 -3.7974 33 1 7.7149 -2.2763 -2.8144 34 1 3.5466 -3.1835 -2.9081 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000162271084.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:41:11 Heat of formation + Delta-G solvation = -83.414809 kcal Electronic energy + Delta-G solvation = -21800.647492 eV Core-core repulsion = 18170.887666 eV Total energy + Delta-G solvation = -3629.759826 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.40350 -38.86166 -36.98070 -36.82068 -36.12051 -34.78331 -32.69057 -31.75394 -30.89031 -29.21348 -26.81096 -25.30063 -23.11328 -22.63970 -21.16164 -19.66435 -18.26554 -17.86080 -16.52696 -16.25979 -16.02265 -15.53847 -15.14190 -14.81388 -14.50678 -14.36726 -13.98696 -13.55207 -13.19325 -12.57488 -12.55549 -12.47876 -12.26974 -11.99136 -11.70142 -11.45883 -11.31905 -11.17671 -11.15023 -11.01058 -10.86592 -10.74848 -10.36636 -10.29220 -9.45862 -9.11162 -8.98501 -8.80797 -8.61412 -8.05459 -6.17484 -4.26997 0.72054 0.72709 1.56834 2.02427 2.99257 3.17360 3.20746 3.28873 3.31328 3.81151 4.23694 4.30693 4.37214 4.63575 4.69260 4.81637 4.90745 5.14996 5.15947 5.28577 5.36655 5.70806 5.78033 5.97897 6.19195 6.74913 6.88543 7.07092 7.31773 7.35708 7.48135 7.62568 7.83483 8.07993 8.50043 8.68147 8.93077 9.40446 10.88504 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.010718 B = 0.004558 C = 0.003991 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2611.687970 B = 6142.137978 C = 7013.285813 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.264 3.736 3 H 0.049 0.951 4 C -0.533 4.533 5 H 0.062 0.938 6 C 0.067 3.933 7 N -0.883 5.883 8 Si 0.900 3.100 9 H -0.272 1.272 10 H -0.282 1.282 11 H -0.282 1.282 12 N -0.698 5.698 13 C 0.477 3.523 14 O -0.541 6.541 15 C 0.132 3.868 16 H 0.133 0.867 17 O -0.530 6.530 18 C -0.084 4.084 19 C -0.091 4.091 20 C -0.017 4.017 21 Cl -0.056 7.056 22 C -0.102 4.102 23 C -0.018 4.018 24 Cl -0.055 7.055 25 C -0.092 4.092 26 H 0.091 0.909 27 H 0.027 0.973 28 H 0.015 0.985 29 H 0.264 0.736 30 H 0.389 0.611 31 H 0.382 0.618 32 H 0.140 0.860 33 H 0.145 0.855 34 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.497 -7.491 -12.695 18.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.162 3.838 3 H 0.067 0.933 4 C -0.572 4.572 5 H 0.080 0.920 6 C -0.136 4.136 7 N -0.520 5.520 8 Si 0.728 3.272 9 H -0.197 1.197 10 H -0.208 1.208 11 H -0.208 1.208 12 N -0.347 5.347 13 C 0.260 3.740 14 O -0.420 6.420 15 C 0.068 3.932 16 H 0.151 0.849 17 O -0.335 6.335 18 C -0.086 4.086 19 C -0.109 4.109 20 C -0.044 4.044 21 Cl -0.027 7.027 22 C -0.121 4.121 23 C -0.045 4.045 24 Cl -0.026 7.026 25 C -0.111 4.111 26 H 0.110 0.890 27 H 0.046 0.954 28 H 0.034 0.966 29 H 0.074 0.926 30 H 0.221 0.779 31 H 0.232 0.768 32 H 0.158 0.842 33 H 0.163 0.837 34 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 9.948 -7.007 -12.773 17.641 hybrid contribution 0.959 -0.561 1.276 1.692 sum 10.908 -7.567 -11.496 17.562 Atomic orbital electron populations 1.22085 0.98263 0.99238 1.01041 1.18803 0.91142 0.93977 0.79838 0.93313 1.21215 1.32495 1.13269 0.90198 0.92001 1.24876 0.94745 0.94923 0.99065 1.69904 1.35826 1.22403 1.23860 0.86411 0.78664 0.79593 0.82582 1.19670 1.20838 1.20807 1.46559 1.64098 1.13622 1.10378 1.20947 0.79685 0.88134 0.85247 1.90698 1.51178 1.15624 1.84453 1.20813 0.91368 0.94033 0.86941 0.84923 1.86596 1.73621 1.35232 1.38073 1.20204 0.95749 0.93248 0.99353 1.20881 0.90299 1.00615 0.99152 1.20613 0.89535 0.90699 1.03568 1.98392 1.48774 1.59626 1.95891 1.20902 0.99933 0.90889 1.00381 1.20638 0.94024 0.86841 1.02976 1.98395 1.95302 1.17626 1.91285 1.20986 0.95540 0.95787 0.98781 0.89024 0.95355 0.96590 0.92566 0.77890 0.76825 0.84183 0.83736 0.83679 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.58 9.26 37.16 0.34 -3.24 16 2 C 0.26 6.49 2.56 -69.08 -0.18 6.32 16 3 H 0.05 1.39 7.58 -51.93 -0.39 1.00 16 4 C -0.53 -13.76 8.73 -34.44 -0.30 -14.06 16 5 H 0.06 1.53 7.74 -52.49 -0.41 1.13 16 6 C 0.07 1.78 5.30 -17.82 -0.09 1.68 16 7 N -0.88 -24.46 11.32 55.43 0.63 -23.83 16 8 Si 0.90 20.38 29.54 -169.99 -5.02 15.36 16 9 H -0.27 -6.04 7.11 56.52 0.40 -5.63 16 10 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 11 H -0.28 -6.34 7.11 56.52 0.40 -5.94 16 12 N -0.70 -13.67 5.02 -54.93 -0.28 -13.94 16 13 C 0.48 8.83 7.11 -10.99 -0.08 8.75 16 14 O -0.54 -12.21 15.99 -14.31 -0.23 -12.44 16 15 C 0.13 1.78 3.62 -29.04 -0.11 1.67 16 16 H 0.13 1.48 8.00 -51.93 -0.42 1.07 16 17 O -0.53 -7.27 12.84 -55.09 -0.71 -7.98 16 18 C -0.08 -1.02 4.92 -104.64 -0.51 -1.54 16 19 C -0.09 -1.09 9.10 -39.54 -0.36 -1.45 16 20 C -0.02 -0.20 6.32 -39.50 -0.25 -0.45 16 21 Cl -0.06 -0.60 28.96 -51.86 -1.50 -2.10 16 22 C -0.10 -1.10 9.62 -39.51 -0.38 -1.48 16 23 C -0.02 -0.20 6.32 -39.50 -0.25 -0.45 16 24 Cl -0.06 -0.57 28.96 -51.86 -1.50 -2.07 16 25 C -0.09 -1.01 9.45 -39.54 -0.37 -1.39 16 26 H 0.09 2.43 6.07 -51.93 -0.32 2.11 16 27 H 0.03 0.63 8.14 -51.93 -0.42 0.21 16 28 H 0.02 0.36 8.14 -51.93 -0.42 -0.06 16 29 H 0.26 6.94 8.31 -40.82 -0.34 6.61 16 30 H 0.39 6.54 8.54 -40.82 -0.35 6.19 16 31 H 0.38 4.51 7.24 45.56 0.33 4.84 16 32 H 0.14 1.55 6.77 -52.49 -0.36 1.20 16 33 H 0.14 1.31 8.06 -52.48 -0.42 0.89 16 34 H 0.15 1.30 8.04 -52.48 -0.42 0.88 16 LS Contribution 328.89 15.07 4.96 4.96 Total: -1.00 -30.29 328.89 -8.92 -39.21 By element: Atomic # 1 Polarization: 11.19 SS G_CDS: -2.73 Total: 8.46 kcal Atomic # 6 Polarization: -3.08 SS G_CDS: -2.54 Total: -5.62 kcal Atomic # 7 Polarization: -38.13 SS G_CDS: 0.35 Total: -37.78 kcal Atomic # 8 Polarization: -19.48 SS G_CDS: -0.94 Total: -20.42 kcal Atomic # 14 Polarization: 20.38 SS G_CDS: -5.02 Total: 15.36 kcal Atomic # 17 Polarization: -1.17 SS G_CDS: -3.00 Total: -4.17 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -30.29 -8.92 -39.21 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000162271084.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -44.204 kcal (2) G-P(sol) polarization free energy of solvation -30.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.494 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.921 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -83.415 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds