Wall clock time and date at job start Tue Mar 31 2020 11:10:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31514 * 1 3 3 Si 1.86800 * 119.99869 * 2 1 4 4 H 1.48496 * 109.47180 * 359.97438 * 3 2 1 5 5 H 1.48503 * 109.47084 * 120.00052 * 3 2 1 6 6 H 1.48501 * 109.46867 * 239.99627 * 3 2 1 7 7 C 1.37880 * 119.99867 * 179.97438 * 2 1 3 8 8 H 1.07997 * 119.99971 * 180.02562 * 7 2 1 9 9 C 1.50697 * 120.00052 * 359.97438 * 7 2 1 10 10 O 1.42901 * 112.94172 * 50.33602 * 9 7 2 11 11 C 1.53940 * 113.74429 * 278.74524 * 9 7 2 12 12 N 1.47816 * 86.03510 * 222.08516 * 11 9 7 13 13 C 1.34776 * 134.45463 * 204.64397 * 12 11 9 14 14 O 1.21584 * 119.99902 * 174.50447 * 13 12 11 15 15 C 1.47576 * 120.00351 * 354.50744 * 13 12 11 16 16 C 1.39747 * 120.13295 * 335.34892 * 15 13 12 17 17 C 1.37747 * 119.92228 * 179.97438 * 16 15 13 18 18 C 1.38728 * 120.20533 * 359.97438 * 17 16 15 19 19 F 1.35108 * 119.86160 * 179.97438 * 18 17 16 20 20 C 1.38582 * 120.27685 * 0.02562 * 18 17 16 21 21 Cl 1.73603 * 119.96677 * 179.97438 * 20 18 17 22 22 C 1.38301 * 120.07036 * 359.74484 * 20 18 17 23 23 F 1.35098 * 120.09812 * 180.27181 * 22 20 18 24 24 C 1.47572 * 91.05014 * 24.54783 * 12 11 9 25 25 H 0.97004 * 119.99869 * 0.02562 * 1 2 3 26 26 H 0.96698 * 114.00161 * 309.66776 * 10 9 7 27 27 H 1.08998 * 113.76990 * 336.34679 * 11 9 7 28 28 H 1.09004 * 113.77170 * 107.74539 * 11 9 7 29 29 H 1.07998 * 120.03531 * 359.97438 * 16 15 13 30 30 H 1.08003 * 119.89226 * 180.02562 * 17 16 15 31 31 H 1.09002 * 113.76706 * 221.14941 * 24 12 11 32 32 H 1.08999 * 113.77159 * 89.75698 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2491 1.6178 0.0000 4 1 1.2841 2.7464 -0.0006 5 1 3.1029 1.6964 1.2125 6 1 3.1029 1.6963 -1.2125 7 6 2.0045 -1.1941 0.0005 8 1 3.0845 -1.1941 0.0010 9 6 1.2510 -2.4992 0.0017 10 8 0.2447 -2.5622 -1.0109 11 6 0.7561 -2.9279 1.3949 12 7 1.1919 -4.2891 1.0179 13 6 0.8426 -5.5326 1.4029 14 8 1.3142 -6.4994 0.8362 15 6 -0.1122 -5.7207 2.5123 16 6 -0.2652 -4.7265 3.4824 17 6 -1.1581 -4.9065 4.5158 18 6 -1.9067 -6.0717 4.5964 19 9 -2.7801 -6.2411 5.6132 20 6 -1.7617 -7.0630 3.6389 21 17 -2.7021 -8.5182 3.7481 22 6 -0.8720 -6.8923 2.5939 23 9 -0.7342 -7.8560 1.6572 24 6 2.1608 -3.7401 0.0496 25 1 -0.4850 0.8401 -0.0004 26 1 -0.3474 -1.7978 -1.0252 27 1 1.3273 -2.4955 2.2163 28 1 -0.3216 -2.8312 1.5273 29 1 0.3159 -3.8183 3.4220 30 1 -1.2763 -4.1376 5.2650 31 1 2.2026 -4.2907 -0.8902 32 1 3.1455 -3.5467 0.4749 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000191953382.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:10:27 Heat of formation + Delta-G solvation = -109.473934 kcal Electronic energy + Delta-G solvation = -23979.092096 eV Core-core repulsion = 19796.405581 eV Total energy + Delta-G solvation = -4182.686515 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 317.042 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -49.37262 -49.07576 -40.09186 -38.69110 -37.35136 -36.78260 -34.09738 -32.31682 -31.37937 -30.86328 -28.53994 -25.63621 -25.54205 -23.81694 -23.21341 -20.50761 -19.11118 -18.30347 -17.81774 -17.51717 -16.96295 -16.43686 -16.02928 -15.78797 -15.49451 -15.34117 -15.00332 -14.66693 -14.61112 -14.16196 -13.70105 -13.21993 -12.94751 -12.85990 -12.73896 -12.47175 -12.14893 -11.95127 -11.68502 -11.64275 -11.34921 -11.20877 -11.10882 -10.62279 -10.39822 -9.87223 -9.39827 -9.15901 -9.07124 -8.86088 -8.55343 -8.01397 -6.48298 -4.59322 0.28296 0.56292 1.57708 2.60166 3.10403 3.15313 3.17393 3.22035 3.39864 3.48655 3.98672 4.11262 4.28711 4.37618 4.60332 4.76178 5.04960 5.21768 5.45454 5.51861 5.56618 5.73397 5.82749 6.00672 6.19365 6.25032 6.28846 6.46578 6.52916 6.96312 7.53869 7.71180 8.22087 8.44263 8.47922 9.12399 9.33014 10.58415 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.021973 B = 0.003660 C = 0.003324 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1273.970336 B = 7649.203314 C = 8422.821762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.897 5.897 2 C 0.074 3.926 3 Si 0.908 3.092 4 H -0.284 1.284 5 H -0.273 1.273 6 H -0.273 1.273 7 C -0.540 4.540 8 H 0.072 0.928 9 C 0.241 3.759 10 O -0.571 6.571 11 C 0.069 3.931 12 N -0.624 5.624 13 C 0.571 3.429 14 O -0.542 6.542 15 C -0.153 4.153 16 C -0.023 4.023 17 C -0.159 4.159 18 C 0.156 3.844 19 F -0.116 7.116 20 C -0.131 4.131 21 Cl -0.028 7.028 22 C 0.193 3.807 23 F -0.097 7.097 24 C 0.114 3.886 25 H 0.274 0.726 26 H 0.392 0.608 27 H 0.087 0.913 28 H 0.074 0.926 29 H 0.161 0.839 30 H 0.159 0.841 31 H 0.074 0.926 32 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.744 -6.603 10.279 12.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.537 5.537 2 C -0.129 4.129 3 Si 0.734 3.266 4 H -0.210 1.210 5 H -0.199 1.199 6 H -0.198 1.198 7 C -0.578 4.578 8 H 0.090 0.910 9 C 0.199 3.801 10 O -0.383 6.383 11 C -0.053 4.053 12 N -0.356 5.356 13 C 0.359 3.641 14 O -0.422 6.422 15 C -0.158 4.158 16 C -0.042 4.042 17 C -0.178 4.178 18 C 0.136 3.864 19 F -0.095 7.095 20 C -0.159 4.159 21 Cl 0.001 6.999 22 C 0.171 3.829 23 F -0.074 7.074 24 C -0.007 4.007 25 H 0.085 0.915 26 H 0.247 0.753 27 H 0.105 0.895 28 H 0.092 0.908 29 H 0.179 0.821 30 H 0.177 0.823 31 H 0.093 0.907 32 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -3.541 -7.912 9.895 13.155 hybrid contribution -0.239 1.055 0.353 1.138 sum -3.780 -6.856 10.249 12.897 Atomic orbital electron populations 1.69386 1.06173 1.28426 1.49703 1.25061 0.95018 0.99873 0.92932 0.86389 0.79520 0.81593 0.79051 1.20986 1.19856 1.19819 1.21449 0.93949 0.89812 1.52611 0.90970 1.19809 0.85664 0.91234 0.83380 1.86081 1.47037 1.49870 1.55294 1.24548 1.00335 0.77178 1.03229 1.50125 1.39983 1.04252 1.41281 1.17338 0.81742 0.82647 0.82350 1.90800 1.56478 1.39048 1.55879 1.20231 1.01235 0.94402 0.99890 1.21524 0.94558 0.97729 0.90388 1.21156 0.98074 0.96944 1.01581 1.17246 0.90362 0.93557 0.85272 1.91577 1.66141 1.95451 1.56293 1.20799 1.02630 0.93134 0.99379 1.98400 1.70481 1.33149 1.97867 1.17004 0.93772 0.86171 0.85970 1.91646 1.93823 1.60196 1.61756 1.23537 0.93173 0.92588 0.91390 0.91525 0.75272 0.89482 0.90785 0.82120 0.82332 0.90724 0.89122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -21.30 11.20 55.43 0.62 -20.68 16 2 C 0.07 1.73 5.40 -17.82 -0.10 1.63 16 3 Si 0.91 18.35 29.54 -169.99 -5.02 13.33 16 4 H -0.28 -5.77 7.11 56.52 0.40 -5.37 16 5 H -0.27 -5.44 7.11 56.52 0.40 -5.04 16 6 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 7 C -0.54 -12.59 8.61 -34.44 -0.30 -12.89 16 8 H 0.07 1.64 7.81 -52.49 -0.41 1.23 16 9 C 0.24 5.35 1.40 -90.85 -0.13 5.22 16 10 O -0.57 -13.94 13.48 -35.23 -0.48 -14.42 16 11 C 0.07 1.32 5.68 -2.84 -0.02 1.30 16 12 N -0.62 -12.21 3.58 -179.35 -0.64 -12.86 16 13 C 0.57 11.28 7.78 -12.45 -0.10 11.18 16 14 O -0.54 -12.38 16.46 5.29 0.09 -12.29 16 15 C -0.15 -2.46 5.82 -104.91 -0.61 -3.07 16 16 C -0.02 -0.30 8.82 -39.20 -0.35 -0.64 16 17 C -0.16 -1.67 10.00 -39.58 -0.40 -2.06 16 18 C 0.16 1.85 7.28 -39.27 -0.29 1.56 16 19 F -0.12 -1.33 16.82 2.25 0.04 -1.29 16 20 C -0.13 -1.76 6.32 -39.43 -0.25 -2.01 16 21 Cl -0.03 -0.35 28.26 -51.86 -1.47 -1.82 16 22 C 0.19 3.03 7.22 -38.95 -0.28 2.75 16 23 F -0.10 -1.70 15.42 2.25 0.03 -1.67 16 24 C 0.11 2.32 8.23 -2.97 -0.02 2.29 16 25 H 0.27 6.26 8.31 -40.82 -0.34 5.92 16 26 H 0.39 9.64 6.60 45.56 0.30 9.94 16 27 H 0.09 1.49 7.70 -51.93 -0.40 1.09 16 28 H 0.07 1.40 7.86 -51.93 -0.41 0.99 16 29 H 0.16 1.89 5.53 -52.49 -0.29 1.60 16 30 H 0.16 1.18 8.06 -52.48 -0.42 0.76 16 31 H 0.07 1.56 8.14 -51.93 -0.42 1.14 16 32 H 0.09 1.64 8.09 -51.93 -0.42 1.22 16 LS Contribution 306.75 15.07 4.62 4.62 Total: -1.00 -26.91 306.75 -6.63 -33.54 By element: Atomic # 1 Polarization: 9.88 SS G_CDS: -1.61 Total: 8.27 kcal Atomic # 6 Polarization: 8.09 SS G_CDS: -2.83 Total: 5.26 kcal Atomic # 7 Polarization: -33.52 SS G_CDS: -0.02 Total: -33.54 kcal Atomic # 8 Polarization: -26.32 SS G_CDS: -0.39 Total: -26.71 kcal Atomic # 9 Polarization: -3.03 SS G_CDS: 0.07 Total: -2.96 kcal Atomic # 14 Polarization: 18.35 SS G_CDS: -5.02 Total: 13.33 kcal Atomic # 17 Polarization: -0.35 SS G_CDS: -1.47 Total: -1.82 kcal Total LS contribution 4.62 Total: 4.62 kcal Total: -26.91 -6.63 -33.54 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000191953382.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -75.933 kcal (2) G-P(sol) polarization free energy of solvation -26.906 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.635 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds