Wall clock time and date at job start Tue Mar 31 2020 11:14:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31511 * 1 3 3 Si 1.86808 * 120.00112 * 2 1 4 4 H 1.48493 * 109.47111 * 359.97438 * 3 2 1 5 5 H 1.48498 * 109.46984 * 120.00333 * 3 2 1 6 6 H 1.48501 * 109.46759 * 240.00153 * 3 2 1 7 7 C 1.37881 * 120.00038 * 180.02562 * 2 1 3 8 8 H 1.08002 * 119.99997 * 180.02562 * 7 2 1 9 9 C 1.50697 * 119.99622 * 359.97438 * 7 2 1 10 10 O 1.42898 * 112.94756 * 50.33585 * 9 7 2 11 11 C 1.53945 * 113.74278 * 278.73981 * 9 7 2 12 12 N 1.47813 * 86.03905 * 222.08665 * 11 9 7 13 13 C 1.34771 * 134.45903 * 204.64685 * 12 11 9 14 14 O 1.21581 * 120.00420 * 174.49990 * 13 12 11 15 15 C 1.47643 * 119.99938 * 354.50422 * 13 12 11 16 16 C 1.39708 * 120.14005 * 335.35818 * 15 13 12 17 17 C 1.37992 * 119.86394 * 179.97438 * 16 15 13 18 18 F 1.35095 * 119.92317 * 180.02562 * 17 16 15 19 19 C 1.38811 * 120.15044 * 359.97438 * 17 16 15 20 20 Cl 1.73602 * 119.84743 * 180.02562 * 19 17 16 21 21 C 1.38316 * 120.29363 * 359.97438 * 19 17 16 22 22 C 1.38262 * 120.13110 * 359.79119 * 21 19 17 23 23 F 1.35105 * 120.07407 * 180.23071 * 22 21 19 24 24 C 1.47580 * 91.04942 * 24.54892 * 12 11 9 25 25 H 0.97005 * 119.99862 * 359.97438 * 1 2 3 26 26 H 0.96697 * 114.00228 * 309.66988 * 10 9 7 27 27 H 1.08999 * 113.77415 * 336.35448 * 11 9 7 28 28 H 1.09001 * 113.76443 * 107.74873 * 11 9 7 29 29 H 1.07999 * 120.06613 * 359.96269 * 16 15 13 30 30 H 1.07998 * 119.93471 * 180.02562 * 21 19 17 31 31 H 1.08999 * 113.77521 * 221.15307 * 24 12 11 32 32 H 1.08998 * 113.76757 * 89.75219 * 24 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3151 0.0000 0.0000 3 14 2.2492 1.6178 0.0000 4 1 1.2842 2.7465 -0.0006 5 1 3.1030 1.6964 1.2125 6 1 3.1029 1.6964 -1.2126 7 6 2.0045 -1.1941 -0.0005 8 1 3.0845 -1.1941 -0.0001 9 6 1.2510 -2.4991 -0.0005 10 8 0.2446 -2.5614 -1.0131 11 6 0.7561 -2.9291 1.3924 12 7 1.1919 -4.2900 1.0142 13 6 0.8426 -5.5338 1.3980 14 8 1.3140 -6.5001 0.8304 15 6 -0.1126 -5.7229 2.5078 16 6 -0.2657 -4.7299 3.4786 17 6 -1.1605 -4.9124 4.5131 18 9 -1.3098 -3.9527 5.4521 19 6 -1.9082 -6.0793 4.5905 20 17 -3.0321 -6.3004 5.8950 21 6 -1.7625 -7.0662 3.6323 22 6 -0.8730 -6.8937 2.5880 23 9 -0.7350 -7.8563 1.6502 24 6 2.1607 -3.7401 0.0462 25 1 -0.4850 0.8401 0.0004 26 1 -0.3475 -1.7970 -1.0268 27 1 1.3273 -2.4974 2.2142 28 1 -0.3215 -2.8325 1.5248 29 1 0.3152 -3.8213 3.4195 30 1 -2.3475 -7.9716 3.6980 31 1 2.2026 -4.2898 -0.8941 32 1 3.1455 -3.5471 0.4717 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000193989790.mol2 32 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:14:43 Heat of formation + Delta-G solvation = -110.646587 kcal Electronic energy + Delta-G solvation = -24028.330317 eV Core-core repulsion = 19845.592952 eV Total energy + Delta-G solvation = -4182.737365 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 317.042 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -49.17379 -49.02364 -40.09591 -38.75602 -37.41269 -36.76375 -34.10468 -32.30778 -31.82871 -30.32226 -28.61888 -25.68220 -25.55356 -24.12661 -22.94092 -20.51481 -19.15440 -17.88951 -17.85337 -17.50433 -17.24909 -16.38376 -16.13797 -15.62868 -15.50078 -15.15500 -14.79934 -14.70035 -14.48454 -14.13893 -13.91802 -13.30600 -13.10401 -12.98113 -12.72065 -12.54769 -12.16207 -11.87405 -11.64910 -11.48411 -11.41371 -11.20495 -11.09632 -10.61127 -10.39071 -9.88817 -9.45433 -9.39587 -8.86319 -8.83983 -8.54870 -8.02258 -6.46924 -4.58006 0.21258 0.60450 1.51544 2.56379 3.12024 3.14747 3.18858 3.22863 3.43276 3.69047 3.87750 4.12690 4.19438 4.42098 4.64530 4.78225 5.01768 5.21005 5.36409 5.46406 5.54706 5.65956 5.83079 6.01016 6.22722 6.25152 6.29667 6.45450 6.53041 6.96717 7.55198 7.71914 8.20002 8.44728 8.45822 9.13638 9.33394 10.59904 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.016400 B = 0.004102 C = 0.003470 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1706.885876 B = 6824.153721 C = 8066.248205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.897 5.897 2 C 0.074 3.926 3 Si 0.908 3.092 4 H -0.284 1.284 5 H -0.273 1.273 6 H -0.273 1.273 7 C -0.541 4.541 8 H 0.072 0.928 9 C 0.242 3.758 10 O -0.571 6.571 11 C 0.069 3.931 12 N -0.623 5.623 13 C 0.569 3.431 14 O -0.540 6.540 15 C -0.119 4.119 16 C -0.081 4.081 17 C 0.095 3.905 18 F -0.118 7.118 19 C -0.032 4.032 20 Cl -0.035 7.035 21 C -0.130 4.130 22 C 0.157 3.843 23 F -0.106 7.106 24 C 0.115 3.885 25 H 0.275 0.725 26 H 0.393 0.607 27 H 0.087 0.913 28 H 0.074 0.926 29 H 0.166 0.834 30 H 0.162 0.838 31 H 0.075 0.925 32 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.442 -7.948 10.122 13.615 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.536 5.536 2 C -0.129 4.129 3 Si 0.735 3.265 4 H -0.210 1.210 5 H -0.198 1.198 6 H -0.198 1.198 7 C -0.579 4.579 8 H 0.091 0.909 9 C 0.200 3.800 10 O -0.383 6.383 11 C -0.054 4.054 12 N -0.355 5.355 13 C 0.357 3.643 14 O -0.420 6.420 15 C -0.124 4.124 16 C -0.100 4.100 17 C 0.075 3.925 18 F -0.096 7.096 19 C -0.060 4.060 20 Cl -0.006 7.006 21 C -0.150 4.150 22 C 0.136 3.864 23 F -0.084 7.084 24 C -0.007 4.007 25 H 0.085 0.915 26 H 0.247 0.753 27 H 0.105 0.895 28 H 0.092 0.908 29 H 0.184 0.816 30 H 0.179 0.821 31 H 0.093 0.907 32 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -4.225 -9.087 9.846 14.049 hybrid contribution -0.107 1.420 0.476 1.502 sum -4.332 -7.667 10.322 13.568 Atomic orbital electron populations 1.69382 1.06186 1.28454 1.49626 1.25064 0.95020 0.99897 0.92903 0.86386 0.79527 0.81585 0.79046 1.20967 1.19842 1.19804 1.21443 0.93947 0.89796 1.52692 0.90949 1.19805 0.85644 0.91261 0.83314 1.86074 1.47037 1.49916 1.55255 1.24571 1.00383 0.77113 1.03293 1.50160 1.39875 1.04301 1.41197 1.17372 0.81819 0.82695 0.82427 1.90801 1.56378 1.39069 1.55726 1.20153 0.99912 0.94068 0.98244 1.21501 0.96952 0.99973 0.91592 1.17146 0.98941 0.86547 0.89857 1.91581 1.94525 1.61192 1.62338 1.20788 0.96425 0.95027 0.93784 1.98407 1.59070 1.96913 1.46196 1.20786 1.00508 1.00609 0.93091 1.17378 0.95491 0.85985 0.87515 1.91628 1.94143 1.60412 1.62191 1.23548 0.93175 0.92573 0.91376 0.91503 0.75251 0.89473 0.90801 0.81625 0.82074 0.90658 0.89073 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -21.71 11.20 55.43 0.62 -21.09 16 2 C 0.07 1.76 5.40 -17.82 -0.10 1.67 16 3 Si 0.91 18.68 29.54 -169.99 -5.02 13.66 16 4 H -0.28 -5.87 7.11 56.52 0.40 -5.47 16 5 H -0.27 -5.56 7.11 56.52 0.40 -5.16 16 6 H -0.27 -5.67 7.11 56.52 0.40 -5.27 16 7 C -0.54 -12.82 8.61 -34.44 -0.30 -13.12 16 8 H 0.07 1.66 7.81 -52.49 -0.41 1.25 16 9 C 0.24 5.45 1.40 -90.85 -0.13 5.32 16 10 O -0.57 -14.06 13.48 -35.23 -0.48 -14.53 16 11 C 0.07 1.35 5.68 -2.84 -0.02 1.34 16 12 N -0.62 -12.40 3.58 -179.28 -0.64 -13.04 16 13 C 0.57 11.26 7.78 -12.42 -0.10 11.16 16 14 O -0.54 -12.19 16.46 5.29 0.09 -12.11 16 15 C -0.12 -1.93 5.82 -104.91 -0.61 -2.54 16 16 C -0.08 -1.14 8.80 -39.12 -0.34 -1.48 16 17 C 0.10 1.23 7.26 -39.46 -0.29 0.94 16 18 F -0.12 -1.55 16.82 2.25 0.04 -1.51 16 19 C -0.03 -0.37 6.33 -39.34 -0.25 -0.62 16 20 Cl -0.04 -0.36 28.60 -51.86 -1.48 -1.84 16 21 C -0.13 -1.48 9.79 -39.54 -0.39 -1.87 16 22 C 0.16 2.29 7.25 -38.98 -0.28 2.01 16 23 F -0.11 -1.72 15.85 2.25 0.04 -1.68 16 24 C 0.11 2.34 8.23 -2.97 -0.02 2.32 16 25 H 0.27 6.38 8.31 -40.82 -0.34 6.04 16 26 H 0.39 9.75 6.60 45.56 0.30 10.05 16 27 H 0.09 1.59 7.70 -51.93 -0.40 1.19 16 28 H 0.07 1.46 7.86 -51.93 -0.41 1.05 16 29 H 0.17 2.29 5.54 -52.49 -0.29 2.00 16 30 H 0.16 1.37 8.06 -52.49 -0.42 0.95 16 31 H 0.07 1.58 8.14 -51.93 -0.42 1.16 16 32 H 0.09 1.67 8.09 -51.93 -0.42 1.25 16 LS Contribution 307.31 15.07 4.63 4.63 Total: -1.00 -26.69 307.31 -6.63 -33.33 By element: Atomic # 1 Polarization: 10.66 SS G_CDS: -1.61 Total: 9.05 kcal Atomic # 6 Polarization: 7.95 SS G_CDS: -2.82 Total: 5.13 kcal Atomic # 7 Polarization: -34.11 SS G_CDS: -0.02 Total: -34.13 kcal Atomic # 8 Polarization: -26.25 SS G_CDS: -0.39 Total: -26.64 kcal Atomic # 9 Polarization: -3.27 SS G_CDS: 0.07 Total: -3.19 kcal Atomic # 14 Polarization: 18.68 SS G_CDS: -5.02 Total: 13.66 kcal Atomic # 17 Polarization: -0.36 SS G_CDS: -1.48 Total: -1.84 kcal Total LS contribution 4.63 Total: 4.63 kcal Total: -26.69 -6.63 -33.33 kcal The number of atoms in the molecule is 32 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000193989790.mol2 32 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.321 kcal (2) G-P(sol) polarization free energy of solvation -26.692 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.012 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.634 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.326 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.647 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds