Wall clock time and date at job start Tue Mar 31 2020 11:42:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53008 * 1 3 3 H 1.08996 * 109.46812 * 2 1 4 4 C 1.50695 * 109.47063 * 239.99851 * 2 1 3 5 5 H 1.07998 * 120.00418 * 245.62304 * 4 2 1 6 6 C 1.37879 * 120.00201 * 65.62961 * 4 2 1 7 7 N 1.31514 * 120.00393 * 197.18198 * 6 4 2 8 8 Si 1.86804 * 119.99786 * 17.45333 * 6 4 2 9 9 H 1.48502 * 109.47029 * 179.72709 * 8 6 4 10 10 H 1.48503 * 109.46948 * 299.72609 * 8 6 4 11 11 H 1.48492 * 109.47033 * 59.72641 * 8 6 4 12 12 N 1.46502 * 109.47016 * 119.99690 * 2 1 3 13 13 C 1.34775 * 120.00053 * 275.00255 * 12 2 1 14 14 O 1.21280 * 120.00115 * 359.97438 * 13 12 2 15 15 C 1.50697 * 119.99887 * 180.02562 * 13 12 2 16 16 O 1.42902 * 109.47061 * 179.97438 * 15 13 12 17 17 C 1.35924 * 116.99938 * 180.02562 * 16 15 13 18 18 C 1.38692 * 120.05156 * 359.71813 * 17 16 15 19 19 C 1.38266 * 119.94138 * 179.77244 * 18 17 16 20 20 Cl 1.73605 * 119.97342 * 180.25822 * 19 18 17 21 21 C 1.38396 * 120.05340 * 0.50921 * 19 18 17 22 22 C 1.38231 * 120.10068 * 359.74603 * 21 19 18 23 23 C 1.38262 * 120.05964 * 359.97438 * 22 21 19 24 24 Cl 1.73594 * 120.02702 * 179.97438 * 23 22 21 25 25 H 1.09000 * 109.46665 * 186.33884 * 1 2 3 26 26 H 1.08994 * 109.46957 * 306.33629 * 1 2 3 27 27 H 1.09002 * 109.47065 * 66.34399 * 1 2 3 28 28 H 0.97001 * 119.99221 * 355.17115 * 7 6 4 29 29 H 0.96996 * 119.99659 * 94.99859 * 12 2 1 30 30 H 1.08996 * 109.47190 * 300.00321 * 15 13 12 31 31 H 1.09000 * 109.47003 * 60.00180 * 15 13 12 32 32 H 1.07998 * 120.02780 * 0.02562 * 18 17 16 33 33 H 1.07990 * 119.94761 * 179.72328 * 21 19 18 34 34 H 1.07997 * 119.96883 * 179.97438 * 22 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 6 2.0324 -0.7104 -1.2304 5 1 2.5763 -1.6384 -1.1340 6 6 1.7977 -0.1756 -2.4794 7 7 1.9225 -0.9278 -3.5509 8 14 1.3097 1.6194 -2.6501 9 1 1.1227 1.9471 -4.0864 10 1 0.0398 1.8589 -1.9184 11 1 2.3784 2.4792 -2.0813 12 7 2.0184 -0.6906 1.1962 13 6 2.1470 -0.0182 2.3572 14 8 1.8590 1.1587 2.4115 15 6 2.6499 -0.7284 3.5875 16 8 2.6984 0.1900 4.6813 17 6 3.1339 -0.2939 5.8744 18 6 3.5012 -1.6262 5.9913 19 6 3.9484 -2.1149 7.2049 20 17 4.4148 -3.7808 7.3504 21 6 4.0197 -1.2783 8.3051 22 6 3.6491 0.0486 8.1923 23 6 3.2067 0.5433 6.9793 24 17 2.7409 2.2097 6.8387 25 1 -0.3633 -1.0214 0.1135 26 1 -0.3633 0.6089 0.8278 27 1 -0.3633 0.4124 -0.9413 28 1 2.2471 -1.8383 -3.4691 29 1 2.2490 -1.6317 1.1527 30 1 1.9778 -1.5507 3.8325 31 1 3.6493 -1.1201 3.3979 32 1 3.4419 -2.2803 5.1340 33 1 4.3650 -1.6629 9.2533 34 1 3.7051 0.6994 9.0523 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000194741294.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:42:09 Heat of formation + Delta-G solvation = -63.781740 kcal Electronic energy + Delta-G solvation = -21045.052202 eV Core-core repulsion = 17416.143730 eV Total energy + Delta-G solvation = -3628.908472 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 3.20 seconds Orbital eigenvalues (eV) -40.70790 -39.16192 -37.81695 -36.96674 -36.34974 -35.02429 -32.57406 -31.16879 -30.89490 -29.97626 -27.77373 -24.88801 -23.38079 -22.90518 -21.10738 -19.74656 -18.88550 -18.00281 -16.93374 -16.75404 -16.51409 -16.12709 -15.48727 -15.18737 -14.50468 -14.47088 -14.07454 -13.53068 -13.44087 -12.91657 -12.75232 -12.71568 -12.66175 -12.25670 -11.90590 -11.83525 -11.62016 -11.40732 -11.38041 -11.03265 -11.02419 -10.52538 -10.09107 -9.84202 -9.36871 -9.29840 -9.14444 -8.57466 -8.38629 -8.32518 -6.64294 -4.28423 0.50350 0.78628 1.58852 1.94111 2.53424 2.97890 3.03218 3.35822 3.42621 3.57015 3.89285 4.25041 4.37557 4.45005 4.54306 4.81590 4.87791 4.96166 5.03402 5.11850 5.16531 5.34190 5.59888 5.66117 5.98086 6.31938 6.48188 6.60196 6.81768 6.88425 7.19852 7.28207 7.54904 8.16686 8.30321 8.60225 8.81126 9.40688 10.76781 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.017886 B = 0.003042 C = 0.002658 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1565.087499 B = 9202.678417 C =10532.413669 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.244 3.756 3 H 0.043 0.957 4 C -0.620 4.620 5 H 0.062 0.938 6 C 0.040 3.960 7 N -0.896 5.896 8 Si 1.041 2.959 9 H -0.282 1.282 10 H -0.271 1.271 11 H -0.279 1.279 12 N -0.697 5.697 13 C 0.504 3.496 14 O -0.529 6.529 15 C 0.034 3.966 16 O -0.268 6.268 17 C 0.158 3.842 18 C -0.196 4.196 19 C 0.009 3.991 20 Cl -0.059 7.059 21 C -0.141 4.141 22 C -0.060 4.060 23 C -0.068 4.068 24 Cl -0.041 7.041 25 H 0.045 0.955 26 H 0.030 0.970 27 H 0.064 0.936 28 H 0.269 0.731 29 H 0.394 0.606 30 H 0.093 0.907 31 H 0.094 0.906 32 H 0.149 0.851 33 H 0.144 0.856 34 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.165 -3.321 24.726 25.293 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C 0.141 3.859 3 H 0.061 0.939 4 C -0.658 4.658 5 H 0.080 0.920 6 C -0.167 4.167 7 N -0.528 5.528 8 Si 0.869 3.131 9 H -0.208 1.208 10 H -0.197 1.197 11 H -0.205 1.205 12 N -0.347 5.347 13 C 0.287 3.713 14 O -0.405 6.405 15 C -0.044 4.044 16 O -0.179 6.179 17 C 0.110 3.890 18 C -0.216 4.216 19 C -0.018 4.018 20 Cl -0.030 7.030 21 C -0.161 4.161 22 C -0.078 4.078 23 C -0.095 4.095 24 Cl -0.012 7.012 25 H 0.064 0.936 26 H 0.049 0.951 27 H 0.083 0.917 28 H 0.079 0.921 29 H 0.228 0.772 30 H 0.111 0.889 31 H 0.111 0.889 32 H 0.167 0.833 33 H 0.161 0.839 34 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.429 -1.119 23.537 23.812 hybrid contribution 0.710 -2.111 1.033 2.455 sum 4.139 -3.230 24.570 25.125 Atomic orbital electron populations 1.22514 0.98681 1.00228 1.00604 1.19063 0.90689 0.94248 0.81891 0.93933 1.22057 1.42053 1.10654 0.91015 0.91964 1.25694 0.94198 1.05132 0.91668 1.70888 1.40730 1.09934 1.31290 0.84088 0.77717 0.75020 0.76324 1.20805 1.19684 1.20522 1.46174 1.65334 1.13830 1.09346 1.19801 0.79662 0.87748 0.84070 1.90722 1.49739 1.15473 1.84576 1.22773 1.03134 0.92585 0.85949 1.86322 1.79406 1.36957 1.15176 1.18608 0.93577 0.90826 0.85989 1.21123 1.06935 0.94649 0.98859 1.20705 0.99998 0.86397 0.94692 1.98397 1.90392 1.16044 1.98128 1.20899 1.04001 0.92651 0.98508 1.20871 0.96189 0.95131 0.95651 1.20310 1.08170 0.87662 0.93402 1.98408 1.90515 1.14064 1.98200 0.93634 0.95065 0.91731 0.92067 0.77241 0.88934 0.88855 0.83325 0.83859 0.83272 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.59 9.16 37.16 0.34 -3.24 16 2 C 0.24 5.72 2.14 -69.08 -0.15 5.57 16 3 H 0.04 1.09 6.23 -51.93 -0.32 0.77 16 4 C -0.62 -16.36 9.00 -34.44 -0.31 -16.67 16 5 H 0.06 1.70 7.96 -52.49 -0.42 1.28 16 6 C 0.04 1.11 5.29 -17.82 -0.09 1.01 16 7 N -0.90 -26.24 13.70 55.43 0.76 -25.48 16 8 Si 1.04 24.78 26.29 -169.99 -4.47 20.31 16 9 H -0.28 -6.70 7.11 56.52 0.40 -6.30 16 10 H -0.27 -6.04 5.76 56.52 0.33 -5.71 16 11 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 12 N -0.70 -13.34 5.07 -54.93 -0.28 -13.62 16 13 C 0.50 9.32 7.87 -10.99 -0.09 9.23 16 14 O -0.53 -12.10 16.16 -14.35 -0.23 -12.34 16 15 C 0.03 0.45 5.22 36.00 0.19 0.64 16 16 O -0.27 -3.97 9.13 -39.41 -0.36 -4.33 16 17 C 0.16 1.92 6.68 -39.20 -0.26 1.66 16 18 C -0.20 -1.95 8.82 -39.40 -0.35 -2.30 16 19 C 0.01 0.08 6.32 -39.51 -0.25 -0.17 16 20 Cl -0.06 -0.49 28.95 -51.86 -1.50 -1.99 16 21 C -0.14 -1.09 9.83 -39.53 -0.39 -1.48 16 22 C -0.06 -0.49 9.82 -39.58 -0.39 -0.88 16 23 C -0.07 -0.76 6.33 -39.36 -0.25 -1.01 16 24 Cl -0.04 -0.51 28.50 -51.86 -1.48 -1.98 16 25 H 0.04 0.94 8.14 -51.93 -0.42 0.52 16 26 H 0.03 0.66 8.14 -51.93 -0.42 0.23 16 27 H 0.06 1.47 4.88 -51.93 -0.25 1.22 16 28 H 0.27 7.78 8.73 -40.82 -0.36 7.42 16 29 H 0.39 6.41 8.53 -40.82 -0.35 6.06 16 30 H 0.09 0.94 7.65 -51.93 -0.40 0.54 16 31 H 0.09 0.98 7.67 -51.93 -0.40 0.58 16 32 H 0.15 1.25 6.30 -52.49 -0.33 0.92 16 33 H 0.14 0.76 8.06 -52.49 -0.42 0.34 16 34 H 0.15 0.85 8.06 -52.49 -0.42 0.43 16 LS Contribution 324.60 15.07 4.89 4.89 Total: -1.00 -31.93 324.60 -8.05 -39.98 By element: Atomic # 1 Polarization: 5.58 SS G_CDS: -3.39 Total: 2.19 kcal Atomic # 6 Polarization: -5.65 SS G_CDS: -2.00 Total: -7.64 kcal Atomic # 7 Polarization: -39.58 SS G_CDS: 0.48 Total: -39.10 kcal Atomic # 8 Polarization: -16.07 SS G_CDS: -0.59 Total: -16.66 kcal Atomic # 14 Polarization: 24.78 SS G_CDS: -4.47 Total: 20.31 kcal Atomic # 17 Polarization: -0.99 SS G_CDS: -2.98 Total: -3.97 kcal Total LS contribution 4.89 Total: 4.89 kcal Total: -31.93 -8.05 -39.98 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000194741294.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.805 kcal (2) G-P(sol) polarization free energy of solvation -31.926 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.977 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 3.20 seconds