Wall clock time and date at job start Tue Mar 31 2020 11:55:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45197 * 1 3 3 C 1.34235 * 116.99798 * 2 1 4 4 O 1.20826 * 119.99934 * 359.97438 * 3 2 1 5 5 C 1.50693 * 119.99968 * 179.97438 * 3 2 1 6 6 H 1.09004 * 109.47421 * 59.99800 * 5 3 2 7 7 C 1.50701 * 109.47433 * 300.00127 * 5 3 2 8 8 C 1.38268 * 119.97962 * 290.37266 * 7 5 3 9 9 C 1.38210 * 120.03608 * 179.72403 * 8 7 5 10 10 C 1.38341 * 120.00095 * 0.54929 * 9 8 7 11 11 Cl 1.73595 * 120.02086 * 179.75027 * 10 9 8 12 12 C 1.38453 * 119.95908 * 359.72528 * 10 9 8 13 13 Cl 1.73601 * 120.01439 * 180.02562 * 12 10 9 14 14 C 1.38201 * 119.98387 * 110.64430 * 7 5 3 15 15 N 1.46499 * 109.47227 * 179.97438 * 5 3 2 16 16 C 1.46503 * 120.00207 * 234.36211 * 15 5 3 17 17 C 1.36936 * 119.99871 * 54.36282 * 15 5 3 18 18 H 1.07997 * 120.00032 * 345.16586 * 17 15 5 19 19 C 1.38819 * 120.00016 * 165.43740 * 17 15 5 20 20 N 1.31613 * 119.99892 * 5.32221 * 19 17 15 21 21 Si 1.86797 * 119.99955 * 185.31835 * 19 17 15 22 22 H 1.48502 * 109.46990 * 60.00294 * 21 19 17 23 23 H 1.48501 * 109.46946 * 179.97438 * 21 19 17 24 24 H 1.48497 * 109.47296 * 300.00234 * 21 19 17 25 25 H 1.09007 * 109.46903 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.47192 * 300.00016 * 1 2 3 27 27 H 1.09000 * 109.47092 * 60.00238 * 1 2 3 28 28 H 1.07995 * 119.97783 * 359.97438 * 8 7 5 29 29 H 1.08003 * 119.99497 * 180.25446 * 9 8 7 30 30 H 1.08003 * 119.99776 * 0.02562 * 14 7 5 31 31 H 1.08999 * 109.47367 * 245.41453 * 16 15 5 32 32 H 1.08999 * 109.46796 * 5.41900 * 16 15 5 33 33 H 1.09003 * 109.46792 * 125.41651 * 16 15 5 34 34 H 0.97004 * 120.00108 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1961 0.0000 4 8 1.4032 2.2094 -0.0005 5 6 3.5662 1.2750 0.0006 6 1 3.9564 0.7807 -0.8891 7 6 4.1046 0.5921 1.2314 8 6 3.9114 1.1601 2.4771 9 6 4.3997 0.5320 3.6072 10 6 5.0922 -0.6601 3.4913 11 17 5.7114 -1.4462 4.9098 12 6 5.2906 -1.2259 2.2434 13 17 6.1588 -2.7221 2.0964 14 6 4.7961 -0.5987 1.1138 15 7 3.9816 2.6798 -0.0002 16 6 4.8986 3.1721 -1.0312 17 6 3.5127 3.5329 0.9629 18 1 2.6665 3.2485 1.5707 19 6 4.1214 4.7658 1.1542 20 7 5.0804 5.1591 0.3431 21 14 3.5796 5.8664 2.5628 22 1 3.7882 5.1594 3.8520 23 1 4.3799 7.1173 2.5497 24 1 2.1404 6.1974 2.4071 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5138 -0.8900 28 1 3.3751 2.0931 2.5674 29 1 4.2449 0.9742 4.5803 30 1 4.9509 -1.0394 0.1400 31 1 5.8396 3.4697 -0.5685 32 1 5.0852 2.3821 -1.7586 33 1 4.4532 4.0308 -1.5336 34 1 5.5061 6.0204 0.4769 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000195158076.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:18 Heat of formation + Delta-G solvation = -30.633817 kcal Electronic energy + Delta-G solvation = -22543.403244 eV Core-core repulsion = 18915.932173 eV Total energy + Delta-G solvation = -3627.471071 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -40.12863 -38.92326 -36.74893 -36.30583 -36.01251 -35.07198 -32.34192 -30.64608 -30.10823 -27.97057 -26.29052 -26.14013 -22.56675 -22.16152 -21.92352 -19.88173 -17.58356 -17.34074 -16.52396 -15.99046 -15.63189 -15.57672 -15.34941 -14.49421 -13.81551 -13.73585 -13.58274 -13.37118 -13.15605 -12.70527 -12.36093 -12.07208 -11.76798 -11.70277 -11.55122 -11.42313 -11.11279 -11.00421 -10.84461 -10.78497 -10.72386 -10.44405 -10.33494 -10.18803 -9.89840 -9.54905 -8.71653 -8.59476 -8.24114 -7.23248 -5.88714 -3.30691 1.28978 1.47295 2.06408 2.43300 2.91994 3.18531 3.33237 3.35597 3.36462 3.82892 4.33726 4.89251 5.10553 5.20707 5.26357 5.39031 5.44365 5.49543 5.54119 5.57872 5.70143 5.83212 5.84960 6.07200 6.23796 6.50478 6.53517 6.89428 6.93185 7.03736 7.36138 7.61098 7.71959 8.11134 8.49103 8.98719 9.55640 9.97922 11.09604 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.011781 B = 0.005606 C = 0.004653 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2376.235635 B = 4993.608196 C = 6015.786175 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.370 6.370 3 C 0.432 3.568 4 O -0.477 6.477 5 C 0.226 3.774 6 H 0.104 0.896 7 C -0.064 4.064 8 C -0.076 4.076 9 C -0.105 4.105 10 C -0.038 4.038 11 Cl -0.070 7.070 12 C -0.037 4.037 13 Cl -0.068 7.068 14 C -0.087 4.087 15 N -0.567 5.567 16 C 0.160 3.840 17 C -0.244 4.244 18 H 0.083 0.917 19 C 0.009 3.991 20 N -0.903 5.903 21 Si 0.907 3.093 22 H -0.279 1.279 23 H -0.287 1.287 24 H -0.281 1.281 25 H 0.091 0.909 26 H 0.056 0.944 27 H 0.055 0.945 28 H 0.160 0.840 29 H 0.135 0.865 30 H 0.137 0.863 31 H 0.065 0.935 32 H -0.001 1.001 33 H 0.042 0.958 34 H 0.256 0.744 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.558 -12.860 2.144 13.130 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.287 6.287 3 C 0.269 3.731 4 O -0.360 6.360 5 C 0.113 3.887 6 H 0.122 0.878 7 C -0.068 4.068 8 C -0.094 4.094 9 C -0.124 4.124 10 C -0.065 4.065 11 Cl -0.041 7.041 12 C -0.065 4.065 13 Cl -0.039 7.039 14 C -0.107 4.107 15 N -0.286 5.286 16 C 0.017 3.983 17 C -0.372 4.372 18 H 0.101 0.899 19 C -0.190 4.190 20 N -0.547 5.547 21 Si 0.736 3.264 22 H -0.205 1.205 23 H -0.213 1.213 24 H -0.207 1.207 25 H 0.109 0.891 26 H 0.075 0.925 27 H 0.074 0.926 28 H 0.178 0.822 29 H 0.153 0.847 30 H 0.155 0.845 31 H 0.083 0.917 32 H 0.018 0.982 33 H 0.060 0.940 34 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -1.526 -12.460 2.194 12.743 hybrid contribution -0.358 0.604 0.829 1.086 sum -1.884 -11.856 3.023 12.380 Atomic orbital electron populations 1.23083 0.78418 1.02534 1.01935 1.86611 1.21984 1.35274 1.84812 1.25973 0.93398 0.81021 0.72663 1.90666 1.66380 1.36047 1.42930 1.18636 0.86439 0.88161 0.95484 0.87847 1.20342 0.97863 0.92636 0.95941 1.21863 0.97739 0.99308 0.90526 1.21070 0.98002 0.93059 1.00261 1.20693 1.03075 0.96340 0.86435 1.98345 1.86231 1.80316 1.39239 1.20541 1.02002 0.90620 0.93330 1.98346 1.75236 1.32104 1.98227 1.20798 0.97996 0.94760 0.97145 1.44096 1.51748 1.01408 1.31305 1.21366 0.94600 0.94264 0.88111 1.19207 1.09921 0.97038 1.11004 0.89915 1.25001 0.97276 0.98028 0.98651 1.70146 1.26640 1.21041 1.36881 0.86273 0.78169 0.79960 0.81991 1.20528 1.21284 1.20673 0.89064 0.92547 0.92596 0.82248 0.84673 0.84479 0.91651 0.98229 0.93972 0.93327 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.46 10.56 101.05 1.07 1.53 16 2 O -0.37 -6.12 10.48 -39.27 -0.41 -6.53 16 3 C 0.43 8.40 6.86 36.00 0.25 8.65 16 4 O -0.48 -10.88 14.20 -18.75 -0.27 -11.15 16 5 C 0.23 4.31 3.00 -70.24 -0.21 4.10 16 6 H 0.10 1.71 7.32 -51.93 -0.38 1.33 16 7 C -0.06 -1.13 4.88 -104.62 -0.51 -1.64 16 8 C -0.08 -1.38 8.77 -39.58 -0.35 -1.73 16 9 C -0.10 -1.70 9.83 -39.55 -0.39 -2.09 16 10 C -0.04 -0.58 6.32 -39.46 -0.25 -0.83 16 11 Cl -0.07 -0.98 27.96 -51.86 -1.45 -2.43 16 12 C -0.04 -0.57 6.32 -39.46 -0.25 -0.82 16 13 Cl -0.07 -0.92 27.96 -51.86 -1.45 -2.37 16 14 C -0.09 -1.35 9.45 -39.56 -0.37 -1.73 16 15 N -0.57 -13.07 2.71 -176.15 -0.48 -13.55 16 16 C 0.16 3.64 9.03 59.85 0.54 4.18 16 17 C -0.24 -6.14 6.23 -15.06 -0.09 -6.24 16 18 H 0.08 2.10 5.18 -52.49 -0.27 1.83 16 19 C 0.01 0.23 5.46 -17.43 -0.10 0.13 16 20 N -0.90 -24.39 9.61 55.49 0.53 -23.85 16 21 Si 0.91 20.92 29.56 -169.99 -5.02 15.90 16 22 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 23 H -0.29 -6.69 7.11 56.52 0.40 -6.29 16 24 H -0.28 -6.56 7.11 56.52 0.40 -6.15 16 25 H 0.09 0.89 8.14 -51.93 -0.42 0.46 16 26 H 0.06 0.76 8.13 -51.93 -0.42 0.33 16 27 H 0.06 0.73 8.13 -51.93 -0.42 0.30 16 28 H 0.16 3.24 4.74 -52.49 -0.25 2.99 16 29 H 0.14 1.94 8.06 -52.48 -0.42 1.51 16 30 H 0.14 1.80 7.97 -52.48 -0.42 1.38 16 31 H 0.07 1.62 6.67 -51.93 -0.35 1.27 16 32 H 0.00 -0.02 7.56 -51.93 -0.39 -0.41 16 33 H 0.04 1.05 7.49 -51.93 -0.39 0.67 16 34 H 0.26 6.79 8.31 -40.82 -0.34 6.45 16 LS Contribution 318.23 15.07 4.80 4.80 Total: -1.00 -28.15 318.23 -7.69 -35.84 By element: Atomic # 1 Polarization: 3.11 SS G_CDS: -3.27 Total: -0.16 kcal Atomic # 6 Polarization: 4.18 SS G_CDS: -0.67 Total: 3.51 kcal Atomic # 7 Polarization: -37.46 SS G_CDS: 0.06 Total: -37.40 kcal Atomic # 8 Polarization: -17.00 SS G_CDS: -0.68 Total: -17.68 kcal Atomic # 14 Polarization: 20.92 SS G_CDS: -5.02 Total: 15.90 kcal Atomic # 17 Polarization: -1.90 SS G_CDS: -2.90 Total: -4.80 kcal Total LS contribution 4.80 Total: 4.80 kcal Total: -28.15 -7.69 -35.84 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000195158076.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 5.206 kcal (2) G-P(sol) polarization free energy of solvation -28.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.688 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.634 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds