Wall clock time and date at job start Tue Mar 31 2020 11:55:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34229 * 116.99622 * 2 1 4 4 O 1.20825 * 120.00244 * 359.97438 * 3 2 1 5 5 C 1.50701 * 119.99903 * 180.02562 * 3 2 1 6 6 H 1.09003 * 109.46762 * 299.99766 * 5 3 2 7 7 C 1.50702 * 109.47241 * 59.99400 * 5 3 2 8 8 C 1.38271 * 119.97583 * 44.88599 * 7 5 3 9 9 C 1.38201 * 120.03780 * 179.97438 * 8 7 5 10 10 C 1.38354 * 120.00054 * 359.97438 * 9 8 7 11 11 Cl 1.73593 * 120.02303 * 180.02562 * 10 9 8 12 12 C 1.38443 * 119.95660 * 0.02562 * 10 9 8 13 13 Cl 1.73602 * 120.01824 * 179.97438 * 12 10 9 14 14 C 1.38197 * 119.98299 * 224.60689 * 7 5 3 15 15 N 1.46496 * 109.47347 * 179.97438 * 5 3 2 16 16 C 1.46497 * 120.00067 * 292.23017 * 15 5 3 17 17 C 1.36940 * 119.99780 * 112.22718 * 15 5 3 18 18 H 1.07993 * 120.00276 * 340.37066 * 17 15 5 19 19 C 1.38815 * 119.99520 * 160.37787 * 17 15 5 20 20 N 1.31608 * 120.00403 * 12.06296 * 19 17 15 21 21 Si 1.86801 * 119.99569 * 192.07072 * 19 17 15 22 22 H 1.48501 * 109.47412 * 89.99731 * 21 19 17 23 23 H 1.48503 * 109.46815 * 209.99612 * 21 19 17 24 24 H 1.48506 * 109.47115 * 329.99573 * 21 19 17 25 25 H 1.09000 * 109.47722 * 60.00119 * 1 2 3 26 26 H 1.09002 * 109.47417 * 299.99825 * 1 2 3 27 27 H 1.08999 * 109.47366 * 179.97438 * 1 2 3 28 28 H 1.08004 * 119.98114 * 359.96982 * 8 7 5 29 29 H 1.07995 * 120.00328 * 179.97438 * 9 8 7 30 30 H 1.07996 * 120.00137 * 0.02562 * 14 7 5 31 31 H 1.08996 * 109.47131 * 5.42058 * 16 15 5 32 32 H 1.09000 * 109.47777 * 125.42102 * 16 15 5 33 33 H 1.08998 * 109.46967 * 245.42487 * 16 15 5 34 34 H 0.97003 * 120.00600 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2750 -0.0006 6 1 3.9563 0.7807 0.8892 7 6 4.1047 0.5920 -1.2313 8 6 3.5213 0.8268 -2.4628 9 6 4.0144 0.2015 -3.5923 10 6 5.0926 -0.6595 -3.4915 11 17 5.7128 -1.4447 -4.9100 12 6 5.6766 -0.8945 -2.2584 13 17 7.0292 -1.9752 -2.1299 14 6 5.1847 -0.2641 -1.1294 15 7 3.9816 2.6798 -0.0011 16 6 3.7286 3.5181 -1.1756 17 6 4.6064 3.2094 1.0964 18 1 4.5175 2.7221 2.0560 19 6 5.3538 4.3729 0.9754 20 7 5.2734 5.0956 -0.1216 21 14 6.4738 4.9126 2.3695 22 1 7.8226 4.3215 2.1781 23 1 6.5788 6.3939 2.3748 24 1 5.9105 4.4516 3.6639 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 -1.0276 -0.0005 28 1 2.6798 1.4992 -2.5419 29 1 3.5580 0.3850 -4.5538 30 1 5.6425 -0.4439 -0.1679 31 1 3.1427 2.9566 -1.9033 32 1 3.1769 4.4086 -0.8745 33 1 4.6778 3.8126 -1.6230 34 1 5.7954 5.9089 -0.2060 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000195158092.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:21 Heat of formation + Delta-G solvation = -34.055713 kcal Electronic energy + Delta-G solvation = -22385.474362 eV Core-core repulsion = 18757.854907 eV Total energy + Delta-G solvation = -3627.619455 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -40.25329 -39.05430 -36.78858 -36.39885 -36.07372 -35.13949 -32.42727 -30.87026 -30.05410 -28.08651 -26.54772 -25.90182 -22.91646 -22.23593 -21.95333 -19.79582 -17.50939 -17.23944 -16.71771 -16.21561 -15.84839 -15.60167 -15.42568 -14.66181 -14.00570 -13.88864 -13.61079 -13.48145 -13.28017 -12.69571 -12.52225 -12.09352 -11.83931 -11.78142 -11.57062 -11.41120 -11.09225 -11.08471 -10.87857 -10.82429 -10.72397 -10.41342 -10.35992 -10.17380 -9.99681 -9.86788 -8.75921 -8.66388 -8.41984 -7.19852 -5.92108 -3.36379 1.12553 1.30778 1.96094 2.32375 2.82951 3.15907 3.30320 3.37276 3.37660 3.62974 4.34650 4.77275 4.91435 5.18184 5.24746 5.30587 5.35130 5.36958 5.40018 5.46360 5.56492 5.74894 5.81415 5.95805 6.10574 6.22058 6.59469 6.66634 6.78652 6.88789 7.45309 7.63098 7.74879 8.12109 8.41106 8.98686 9.55592 9.99448 11.07064 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.011097 B = 0.005390 C = 0.004255 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2522.568616 B = 5193.467702 C = 6579.407121 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.368 6.368 3 C 0.428 3.572 4 O -0.490 6.490 5 C 0.223 3.777 6 H 0.114 0.886 7 C -0.051 4.051 8 C -0.093 4.093 9 C -0.097 4.097 10 C -0.039 4.039 11 Cl -0.065 7.065 12 C -0.028 4.028 13 Cl -0.060 7.060 14 C -0.078 4.078 15 N -0.556 5.556 16 C 0.157 3.843 17 C -0.272 4.272 18 H 0.079 0.921 19 C 0.017 3.983 20 N -0.894 5.894 21 Si 0.911 3.089 22 H -0.283 1.283 23 H -0.289 1.289 24 H -0.277 1.277 25 H 0.055 0.945 26 H 0.056 0.944 27 H 0.092 0.908 28 H 0.135 0.865 29 H 0.138 0.862 30 H 0.144 0.856 31 H 0.003 0.997 32 H 0.039 0.961 33 H 0.060 0.940 34 H 0.257 0.743 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.889 -13.094 -5.468 14.481 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.284 6.284 3 C 0.266 3.734 4 O -0.375 6.375 5 C 0.109 3.891 6 H 0.131 0.869 7 C -0.055 4.055 8 C -0.112 4.112 9 C -0.116 4.116 10 C -0.067 4.067 11 Cl -0.036 7.036 12 C -0.055 4.055 13 Cl -0.032 7.032 14 C -0.098 4.098 15 N -0.273 5.273 16 C 0.014 3.986 17 C -0.400 4.400 18 H 0.096 0.904 19 C -0.183 4.183 20 N -0.537 5.537 21 Si 0.740 3.260 22 H -0.209 1.209 23 H -0.215 1.215 24 H -0.203 1.203 25 H 0.074 0.926 26 H 0.075 0.925 27 H 0.110 0.890 28 H 0.153 0.847 29 H 0.156 0.844 30 H 0.162 0.838 31 H 0.021 0.979 32 H 0.058 0.942 33 H 0.078 0.922 34 H 0.067 0.933 Dipole moment (debyes) X Y Z Total from point charges -2.843 -12.654 -5.602 14.127 hybrid contribution 0.429 0.426 0.565 0.828 sum -2.413 -12.228 -5.037 13.443 Atomic orbital electron populations 1.23104 0.78462 1.02618 1.01933 1.86634 1.21978 1.35183 1.84611 1.26455 0.93964 0.80980 0.72045 1.90621 1.66627 1.36424 1.43835 1.18747 0.85863 0.88588 0.95933 0.86875 1.20225 0.95261 0.94009 0.95968 1.21216 1.00280 0.98165 0.91542 1.20901 0.95046 0.95963 0.99726 1.20626 0.98612 1.00606 0.86847 1.98355 1.86848 1.79526 1.38839 1.20636 0.93195 0.98196 0.93490 1.98362 1.43609 1.62842 1.98338 1.20807 0.95839 0.95619 0.97552 1.43982 1.64864 1.01999 1.16459 1.21368 0.99176 0.92003 0.86050 1.19286 1.24292 1.08548 0.87829 0.90356 1.25100 0.98370 0.97288 0.97505 1.70191 1.41404 1.15187 1.26875 0.86158 0.81120 0.77624 0.81106 1.20929 1.21480 1.20250 0.92597 0.92521 0.88996 0.84719 0.84434 0.83850 0.97906 0.94189 0.92215 0.93252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.42 10.56 101.05 1.07 1.49 16 2 O -0.37 -5.95 10.48 -39.25 -0.41 -6.36 16 3 C 0.43 8.20 6.05 36.01 0.22 8.42 16 4 O -0.49 -10.94 15.40 -18.75 -0.29 -11.23 16 5 C 0.22 4.32 2.90 -70.23 -0.20 4.12 16 6 H 0.11 2.03 7.70 -51.93 -0.40 1.63 16 7 C -0.05 -0.87 4.76 -104.62 -0.50 -1.37 16 8 C -0.09 -1.49 7.70 -39.58 -0.30 -1.79 16 9 C -0.10 -1.37 9.83 -39.55 -0.39 -1.76 16 10 C -0.04 -0.56 6.32 -39.46 -0.25 -0.81 16 11 Cl -0.06 -0.83 27.96 -51.86 -1.45 -2.28 16 12 C -0.03 -0.41 6.32 -39.46 -0.25 -0.66 16 13 Cl -0.06 -0.82 27.96 -51.86 -1.45 -2.27 16 14 C -0.08 -1.23 9.45 -39.56 -0.37 -1.60 16 15 N -0.56 -13.25 2.51 -176.16 -0.44 -13.69 16 16 C 0.16 3.81 7.38 59.85 0.44 4.26 16 17 C -0.27 -7.04 9.65 -15.06 -0.15 -7.19 16 18 H 0.08 1.95 7.83 -52.49 -0.41 1.54 16 19 C 0.02 0.45 5.46 -17.43 -0.10 0.35 16 20 N -0.89 -24.76 9.76 55.49 0.54 -24.22 16 21 Si 0.91 20.82 29.57 -169.99 -5.03 15.79 16 22 H -0.28 -6.44 7.11 56.52 0.40 -6.03 16 23 H -0.29 -6.70 7.11 56.52 0.40 -6.30 16 24 H -0.28 -6.19 7.11 56.52 0.40 -5.79 16 25 H 0.06 0.70 8.13 -51.93 -0.42 0.27 16 26 H 0.06 0.72 8.13 -51.93 -0.42 0.30 16 27 H 0.09 0.85 8.14 -51.93 -0.42 0.43 16 28 H 0.14 2.21 5.78 -52.48 -0.30 1.90 16 29 H 0.14 1.60 8.06 -52.49 -0.42 1.18 16 30 H 0.14 2.05 8.00 -52.49 -0.42 1.63 16 31 H 0.00 0.06 4.47 -51.93 -0.23 -0.18 16 32 H 0.04 1.08 7.63 -51.93 -0.40 0.69 16 33 H 0.06 1.57 6.61 -51.93 -0.34 1.22 16 34 H 0.26 6.89 8.31 -40.82 -0.34 6.55 16 LS Contribution 320.15 15.07 4.82 4.82 Total: -1.00 -29.12 320.15 -7.82 -36.94 By element: Atomic # 1 Polarization: 2.38 SS G_CDS: -3.33 Total: -0.95 kcal Atomic # 6 Polarization: 4.23 SS G_CDS: -0.78 Total: 3.45 kcal Atomic # 7 Polarization: -38.01 SS G_CDS: 0.10 Total: -37.91 kcal Atomic # 8 Polarization: -16.89 SS G_CDS: -0.70 Total: -17.59 kcal Atomic # 14 Polarization: 20.82 SS G_CDS: -5.03 Total: 15.79 kcal Atomic # 17 Polarization: -1.66 SS G_CDS: -2.90 Total: -4.56 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -29.12 -7.82 -36.94 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000195158092.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 2.883 kcal (2) G-P(sol) polarization free energy of solvation -29.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.815 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -34.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds