Wall clock time and date at job start Tue Mar 31 2020 11:47:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 H 1.09002 * 109.46928 * 2 1 4 4 O 1.42899 * 109.47328 * 240.00108 * 2 1 3 5 5 C 1.35900 * 116.99782 * 85.30783 * 4 2 1 6 6 C 1.38719 * 120.03807 * 174.27959 * 5 4 2 7 7 C 1.38274 * 119.95416 * 179.78868 * 6 5 4 8 8 Cl 1.73601 * 119.97756 * 180.20776 * 7 6 5 9 9 C 1.38368 * 120.04073 * 0.45952 * 7 6 5 10 10 C 1.38357 * 120.08563 * 359.79051 * 9 7 6 11 11 Cl 1.73608 * 119.98086 * 179.97438 * 10 9 7 12 12 C 1.38270 * 120.04593 * 359.97438 * 10 9 7 13 13 C 1.50703 * 109.47318 * 119.99934 * 2 1 3 14 14 O 1.21297 * 119.99839 * 115.26661 * 13 2 1 15 15 N 1.34775 * 120.00189 * 295.26963 * 13 2 1 16 16 C 1.46503 * 120.00109 * 176.51105 * 15 13 2 17 17 C 1.37094 * 119.99899 * 356.50667 * 15 13 2 18 18 H 1.08009 * 120.00105 * 1.59508 * 17 15 13 19 19 C 1.38950 * 120.00012 * 181.87398 * 17 15 13 20 20 N 1.31401 * 120.00132 * 349.22524 * 19 17 15 21 21 Si 1.86805 * 120.00162 * 169.22675 * 19 17 15 22 22 H 1.48504 * 109.47068 * 359.97438 * 21 19 17 23 23 H 1.48497 * 109.47322 * 119.99678 * 21 19 17 24 24 H 1.48500 * 109.46962 * 240.00154 * 21 19 17 25 25 H 1.08997 * 109.47322 * 65.55312 * 1 2 3 26 26 H 1.09009 * 109.47116 * 185.55089 * 1 2 3 27 27 H 1.08995 * 109.47236 * 305.54498 * 1 2 3 28 28 H 1.07993 * 120.03071 * 0.02562 * 6 5 4 29 29 H 1.08005 * 119.95452 * 179.76410 * 9 7 6 30 30 H 1.07997 * 120.02590 * 179.97438 * 12 10 9 31 31 H 1.08995 * 109.46643 * 242.62477 * 16 15 13 32 32 H 1.09002 * 109.47024 * 2.61915 * 16 15 13 33 33 H 1.08993 * 109.46821 * 122.62113 * 16 15 13 34 34 H 0.97001 * 120.00207 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8932 1.0277 0.0000 4 8 2.0063 -0.6736 -1.1668 5 6 2.1186 0.0642 -2.3025 6 6 2.6852 -0.4930 -3.4394 7 6 2.7946 0.2579 -4.5954 8 17 3.4987 -0.4407 -6.0202 9 6 2.3480 1.5673 -4.6156 10 6 1.7873 2.1265 -3.4810 11 17 1.2285 3.7699 -3.5092 12 6 1.6718 1.3773 -2.3246 13 6 2.0323 -0.7104 1.2305 14 8 2.6572 -1.7443 1.1212 15 7 1.7873 -0.1970 2.4523 16 6 2.2087 -0.9260 3.6512 17 6 1.1437 1.0074 2.5733 18 1 0.8101 1.5326 1.6903 19 6 0.9256 1.5553 3.8314 20 7 1.1403 0.8339 4.9084 21 14 0.3272 3.3176 3.9918 22 1 0.1639 3.9099 2.6398 23 1 -0.9774 3.3348 4.7010 24 1 1.3198 4.1093 4.7619 25 1 -0.3634 0.4253 -0.9355 26 1 -0.3634 -1.0229 0.0994 27 1 -0.3633 0.5974 0.8361 28 1 3.0372 -1.5139 -3.4231 29 1 2.4376 2.1538 -5.5181 30 1 1.2344 1.8143 -1.4391 31 1 1.3317 -1.1948 4.2399 32 1 2.7406 -1.8311 3.3578 33 1 2.8672 -0.2946 4.2475 34 1 0.9877 1.2162 5.7868 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000263902625.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:47:03 Heat of formation + Delta-G solvation = -42.675645 kcal Electronic energy + Delta-G solvation = -21863.315091 eV Core-core repulsion = 18235.321847 eV Total energy + Delta-G solvation = -3627.993243 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.45989 -38.81566 -37.52596 -36.91165 -36.07292 -34.90452 -32.10903 -31.37970 -30.58146 -29.79905 -26.48326 -25.11018 -23.77968 -22.95083 -21.92289 -19.29794 -18.53954 -17.74028 -16.40496 -16.03092 -15.97050 -15.36506 -15.08162 -14.65869 -14.29282 -14.24056 -14.10116 -13.52922 -13.30712 -12.88964 -12.50080 -12.40530 -12.13542 -12.00874 -11.76363 -11.55333 -11.34544 -11.26797 -11.12722 -11.08142 -10.87744 -10.75664 -10.48991 -10.46173 -10.27748 -9.25374 -8.92597 -8.57111 -8.26597 -8.07889 -6.47426 -4.06821 0.82173 1.07128 1.59657 2.10412 2.97377 3.07814 3.11357 3.18422 3.35661 3.66726 3.92600 4.67257 4.78576 4.84339 4.87646 4.90665 4.96796 5.32013 5.32157 5.51680 5.69283 5.86368 5.91304 5.95154 6.13687 6.14954 6.28605 6.55430 6.75316 7.13995 7.18188 7.32242 7.45080 7.57185 8.19432 8.87397 9.32086 9.71987 10.45856 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.015778 B = 0.004002 C = 0.003288 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1774.192100 B = 6994.979666 C = 8514.504645 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.178 4.178 2 C 0.082 3.918 3 H 0.090 0.910 4 O -0.275 6.275 5 C 0.173 3.827 6 C -0.145 4.145 7 C 0.015 3.985 8 Cl -0.056 7.056 9 C -0.152 4.152 10 C 0.019 3.981 11 Cl -0.058 7.058 12 C -0.203 4.203 13 C 0.450 3.550 14 O -0.594 6.594 15 N -0.434 5.434 16 C 0.123 3.877 17 C -0.345 4.345 18 H 0.105 0.895 19 C 0.040 3.960 20 N -0.865 5.865 21 Si 0.923 3.077 22 H -0.267 1.267 23 H -0.278 1.278 24 H -0.277 1.277 25 H 0.058 0.942 26 H 0.066 0.934 27 H 0.102 0.898 28 H 0.149 0.851 29 H 0.142 0.858 30 H 0.151 0.849 31 H 0.070 0.930 32 H 0.038 0.962 33 H 0.063 0.937 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.540 4.070 -14.734 15.295 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.235 4.235 2 C 0.023 3.977 3 H 0.108 0.892 4 O -0.186 6.186 5 C 0.125 3.875 6 C -0.164 4.164 7 C -0.012 4.012 8 Cl -0.027 7.027 9 C -0.172 4.172 10 C -0.008 4.008 11 Cl -0.029 7.029 12 C -0.223 4.223 13 C 0.237 3.763 14 O -0.481 6.481 15 N -0.153 5.153 16 C -0.019 4.019 17 C -0.472 4.472 18 H 0.122 0.878 19 C -0.166 4.166 20 N -0.503 5.503 21 Si 0.749 3.251 22 H -0.191 1.191 23 H -0.204 1.204 24 H -0.203 1.203 25 H 0.076 0.924 26 H 0.085 0.915 27 H 0.121 0.879 28 H 0.166 0.834 29 H 0.160 0.840 30 H 0.168 0.832 31 H 0.089 0.911 32 H 0.056 0.944 33 H 0.082 0.918 34 H 0.080 0.920 Dipole moment (debyes) X Y Z Total from point charges -0.197 3.461 -14.590 14.996 hybrid contribution -0.456 1.334 0.232 1.429 sum -0.653 4.795 -14.357 15.151 Atomic orbital electron populations 1.22414 0.93211 1.04318 1.03564 1.22222 0.95495 0.96702 0.83293 0.89212 1.86262 1.79804 1.36733 1.15784 1.18726 0.92166 0.89171 0.87484 1.20324 1.04140 1.02123 0.89861 1.20271 0.99370 0.93066 0.88474 1.98379 1.82371 1.84178 1.37806 1.20668 1.03540 0.94215 0.98748 1.20382 0.99370 0.86622 0.94461 1.98387 1.87780 1.18026 1.98696 1.21405 1.07125 0.94320 0.99420 1.19211 0.86112 0.87088 0.83880 1.90571 1.45669 1.25879 1.85953 1.43599 1.48952 1.18852 1.03883 1.21586 1.00512 0.94212 0.85615 1.19855 1.36978 0.95937 0.94438 0.87759 1.25300 0.96525 0.99830 0.94939 1.70222 1.46112 1.35542 0.98458 0.85923 0.78499 0.81722 0.78965 1.19074 1.20410 1.20286 0.92352 0.91464 0.87938 0.83371 0.83988 0.83170 0.91127 0.94355 0.91846 0.91950 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -3.00 8.73 37.15 0.32 -2.68 16 2 C 0.08 1.58 1.80 -27.88 -0.05 1.53 16 3 H 0.09 1.63 5.68 -51.93 -0.29 1.34 16 4 O -0.27 -5.22 9.33 -39.29 -0.37 -5.59 16 5 C 0.17 2.70 6.58 -39.23 -0.26 2.45 16 6 C -0.15 -2.00 9.77 -39.39 -0.38 -2.39 16 7 C 0.02 0.19 6.32 -39.52 -0.25 -0.06 16 8 Cl -0.06 -0.60 28.95 -51.86 -1.50 -2.10 16 9 C -0.15 -1.76 9.61 -39.49 -0.38 -2.14 16 10 C 0.02 0.24 6.32 -39.53 -0.25 -0.01 16 11 Cl -0.06 -0.67 28.95 -51.86 -1.50 -2.17 16 12 C -0.20 -2.87 8.01 -39.39 -0.32 -3.19 16 13 C 0.45 10.80 7.06 -10.98 -0.08 10.72 16 14 O -0.59 -16.04 15.84 -14.32 -0.23 -16.27 16 15 N -0.43 -10.63 3.03 -122.19 -0.37 -11.00 16 16 C 0.12 2.99 8.88 59.85 0.53 3.52 16 17 C -0.34 -8.09 8.27 -14.93 -0.12 -8.21 16 18 H 0.10 2.22 4.86 -52.48 -0.26 1.96 16 19 C 0.04 0.93 5.41 -17.47 -0.09 0.83 16 20 N -0.87 -21.24 9.54 55.50 0.53 -20.71 16 21 Si 0.92 18.15 29.57 -169.99 -5.03 13.13 16 22 H -0.27 -5.03 7.11 56.52 0.40 -4.63 16 23 H -0.28 -5.50 7.11 56.52 0.40 -5.10 16 24 H -0.28 -5.54 7.11 56.52 0.40 -5.14 16 25 H 0.06 0.83 7.03 -51.93 -0.36 0.47 16 26 H 0.07 1.18 8.14 -51.92 -0.42 0.75 16 27 H 0.10 1.78 5.55 -51.93 -0.29 1.50 16 28 H 0.15 1.95 8.06 -52.49 -0.42 1.52 16 29 H 0.14 1.36 8.06 -52.48 -0.42 0.94 16 30 H 0.15 2.09 5.52 -52.49 -0.29 1.80 16 31 H 0.07 1.75 7.03 -51.93 -0.36 1.38 16 32 H 0.04 0.92 6.90 -51.93 -0.36 0.56 16 33 H 0.06 1.57 7.10 -51.93 -0.37 1.20 16 34 H 0.27 6.25 8.31 -40.82 -0.34 5.92 16 LS Contribution 315.51 15.07 4.75 4.75 Total: -1.00 -27.10 315.51 -8.02 -35.12 By element: Atomic # 1 Polarization: 7.45 SS G_CDS: -2.99 Total: 4.46 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -1.33 Total: 0.37 kcal Atomic # 7 Polarization: -31.87 SS G_CDS: 0.16 Total: -31.71 kcal Atomic # 8 Polarization: -21.27 SS G_CDS: -0.59 Total: -21.86 kcal Atomic # 14 Polarization: 18.15 SS G_CDS: -5.03 Total: 13.13 kcal Atomic # 17 Polarization: -1.27 SS G_CDS: -3.00 Total: -4.27 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -27.10 -8.02 -35.12 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000263902625.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.553 kcal (2) G-P(sol) polarization free energy of solvation -27.100 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -34.653 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.023 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.122 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.676 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds