Wall clock time and date at job start Tue Mar 31 2020 11:48:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 N 1.46498 * 109.47156 * 2 1 4 4 C 1.36915 * 119.99904 * 274.16506 * 3 2 1 5 5 H 1.07999 * 119.99880 * 183.01852 * 4 3 2 6 6 C 1.39010 * 120.00082 * 3.01115 * 4 3 2 7 7 N 1.31389 * 119.99895 * 18.66123 * 6 4 3 8 8 Si 1.86799 * 120.00137 * 198.66040 * 6 4 3 9 9 H 1.48500 * 109.47125 * 59.99949 * 8 6 4 10 10 H 1.48506 * 109.47082 * 180.02562 * 8 6 4 11 11 H 1.48500 * 109.47038 * 299.99760 * 8 6 4 12 12 C 1.34778 * 120.00107 * 94.16067 * 3 2 1 13 13 O 1.21635 * 120.00145 * 3.60031 * 12 3 2 14 14 C 1.47379 * 120.00029 * 183.60404 * 12 3 2 15 15 C 1.39812 * 120.17746 * 308.02465 * 14 12 3 16 16 C 1.37811 * 119.90151 * 180.27712 * 15 14 12 17 17 Cl 1.73603 * 119.86553 * 179.76700 * 16 15 14 18 18 C 1.38810 * 120.26495 * 359.74372 * 16 15 14 19 19 Cl 1.73595 * 119.81796 * 179.97438 * 18 16 15 20 20 C 1.38217 * 120.36093 * 0.02562 * 18 16 15 21 21 C 1.38619 * 120.09175 * 359.97438 * 20 18 16 22 22 O 1.35683 * 120.12679 * 179.97438 * 21 20 18 23 23 C 1.42898 * 117.00178 * 359.97438 * 22 21 20 24 24 H 1.08995 * 109.47553 * 300.00390 * 1 2 3 25 25 H 1.09006 * 109.46796 * 60.00202 * 1 2 3 26 26 H 1.08999 * 109.46815 * 179.97438 * 1 2 3 27 27 H 1.08995 * 109.47553 * 239.99610 * 2 1 3 28 28 H 1.09006 * 109.46796 * 119.99798 * 2 1 3 29 29 H 0.97001 * 120.00277 * 179.97438 * 7 6 4 30 30 H 1.08003 * 120.04599 * 0.04289 * 15 14 12 31 31 H 1.08005 * 119.94994 * 179.97438 * 20 18 16 32 32 H 1.08999 * 109.46926 * 179.97438 * 23 22 21 33 33 H 1.09001 * 109.47100 * 60.00075 * 23 22 21 34 34 H 1.08999 * 109.47285 * 300.00223 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.1654 2.0553 -1.1826 5 1 2.5713 3.0561 -1.1868 6 6 1.7923 1.4515 -2.3779 7 7 0.9796 0.4192 -2.3667 8 14 2.4464 2.1078 -3.9998 9 1 3.9292 2.0271 -4.0046 10 1 1.9023 1.2959 -5.1179 11 1 2.0271 3.5226 -4.1665 12 6 2.3228 1.9883 1.1641 13 8 2.2549 1.3692 2.2089 14 6 2.7380 3.4024 1.1712 15 6 3.7716 3.8356 0.3353 16 6 4.1591 5.1580 0.3506 17 17 5.4467 5.6936 -0.6833 18 6 3.5237 6.0635 1.1891 19 17 4.0216 7.7265 1.1996 20 6 2.4974 5.6481 2.0165 21 6 2.0956 4.3214 2.0131 22 8 1.0886 3.9127 2.8254 23 6 0.4857 4.9035 3.6602 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8901 26 1 -0.3633 -1.0277 -0.0005 27 1 1.8934 -0.5139 -0.8899 28 1 1.8933 -0.5138 0.8901 29 1 0.7190 -0.0020 -3.2008 30 1 4.2682 3.1341 -0.3188 31 1 2.0079 6.3582 2.6666 32 1 -0.3030 4.4450 4.2567 33 1 0.0596 5.6915 3.0392 34 1 1.2404 5.3299 4.3211 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000267580683.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:03 Heat of formation + Delta-G solvation = -35.773178 kcal Electronic energy + Delta-G solvation = -22592.628045 eV Core-core repulsion = 18964.934115 eV Total energy + Delta-G solvation = -3627.693930 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -40.25247 -38.35919 -37.60915 -36.38245 -35.83668 -35.08259 -31.68067 -31.25429 -29.85823 -29.32231 -27.13613 -25.06778 -23.68802 -22.30221 -21.54992 -19.46193 -18.37886 -17.30066 -16.67163 -16.09617 -15.67199 -15.47566 -14.75477 -14.36179 -14.08754 -14.02708 -13.72341 -13.46517 -13.18694 -12.67955 -12.31521 -12.07086 -11.77178 -11.74355 -11.66260 -11.39959 -11.20500 -11.05181 -11.03098 -10.77767 -10.71866 -10.52893 -10.36715 -10.16849 -9.78892 -8.91449 -8.74209 -8.46760 -7.94377 -7.85313 -6.42296 -3.94510 1.05429 1.35504 1.96185 2.37136 3.06055 3.15537 3.17761 3.41875 3.45171 3.91749 4.04346 4.62695 4.76129 4.94953 5.04918 5.22367 5.25747 5.39627 5.53537 5.67991 5.73882 5.96312 6.23887 6.27136 6.59638 6.67535 6.78780 6.88212 7.04749 7.23238 7.40545 7.50540 7.64125 7.85690 8.35935 8.95655 9.41026 9.82735 10.47741 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.012041 B = 0.006406 C = 0.004615 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2324.761501 B = 4369.722657 C = 6065.528591 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.133 3.867 3 N -0.422 5.422 4 C -0.339 4.339 5 H 0.108 0.892 6 C 0.038 3.962 7 N -0.851 5.851 8 Si 0.916 3.084 9 H -0.269 1.269 10 H -0.281 1.281 11 H -0.271 1.271 12 C 0.487 3.513 13 O -0.595 6.595 14 C -0.090 4.090 15 C -0.029 4.029 16 C -0.074 4.074 17 Cl -0.060 7.060 18 C 0.009 3.991 19 Cl -0.059 7.059 20 C -0.202 4.202 21 C 0.176 3.824 22 O -0.284 6.284 23 C 0.022 3.978 24 H 0.019 0.981 25 H 0.095 0.905 26 H 0.033 0.967 27 H 0.099 0.901 28 H 0.042 0.958 29 H 0.270 0.730 30 H 0.161 0.839 31 H 0.145 0.855 32 H 0.101 0.899 33 H 0.055 0.945 34 H 0.055 0.945 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.289 9.984 4.077 11.025 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.011 3.989 3 N -0.138 5.138 4 C -0.466 4.466 5 H 0.125 0.875 6 C -0.168 4.168 7 N -0.489 5.489 8 Si 0.742 3.258 9 H -0.194 1.194 10 H -0.207 1.207 11 H -0.196 1.196 12 C 0.275 3.725 13 O -0.482 6.482 14 C -0.094 4.094 15 C -0.048 4.048 16 C -0.101 4.101 17 Cl -0.031 7.031 18 C -0.019 4.019 19 Cl -0.030 7.030 20 C -0.221 4.221 21 C 0.128 3.872 22 O -0.195 6.195 23 C -0.073 4.073 24 H 0.038 0.962 25 H 0.113 0.887 26 H 0.052 0.948 27 H 0.117 0.883 28 H 0.060 0.940 29 H 0.081 0.919 30 H 0.179 0.821 31 H 0.163 0.837 32 H 0.120 0.880 33 H 0.074 0.926 34 H 0.074 0.926 Dipole moment (debyes) X Y Z Total from point charges 2.196 9.484 4.337 10.657 hybrid contribution 0.252 0.914 -0.966 1.354 sum 2.448 10.398 3.371 11.202 Atomic orbital electron populations 1.22113 0.96499 0.99515 1.01640 1.21400 0.94710 0.82196 1.00596 1.43853 1.53361 1.11878 1.04680 1.19996 1.42215 1.01256 0.83127 0.87497 1.25250 0.95196 0.96597 0.99720 1.70213 1.28655 1.22342 1.27711 0.86143 0.79785 0.79093 0.80815 1.19413 1.20656 1.19577 1.17334 0.85633 0.85292 0.84234 1.90661 1.60683 1.65268 1.31551 1.19503 0.97313 0.95704 0.96875 1.21194 0.94573 0.93132 0.95940 1.20423 0.96653 0.93861 0.99200 1.98351 1.48445 1.90270 1.66020 1.20385 0.97482 0.85435 0.98613 1.98357 1.90600 1.16288 1.97775 1.20830 1.01138 0.95530 1.04642 1.18831 0.87841 0.90629 0.89945 1.86306 1.45835 1.36440 1.50911 1.23137 0.98018 0.92435 0.93703 0.96188 0.88699 0.94842 0.88296 0.93974 0.91927 0.82145 0.83720 0.88039 0.92641 0.92616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.23 9.56 37.16 0.36 -2.88 16 2 C 0.13 3.24 5.46 -4.04 -0.02 3.21 16 3 N -0.42 -10.51 2.62 -116.05 -0.30 -10.81 16 4 C -0.34 -8.21 8.59 -15.00 -0.13 -8.34 16 5 H 0.11 2.47 4.68 -52.49 -0.25 2.22 16 6 C 0.04 0.89 5.15 -17.45 -0.09 0.80 16 7 N -0.85 -20.51 7.59 55.50 0.42 -20.09 16 8 Si 0.92 18.68 29.59 -169.99 -5.03 13.65 16 9 H -0.27 -5.43 7.11 56.52 0.40 -5.03 16 10 H -0.28 -5.73 7.11 56.52 0.40 -5.33 16 11 H -0.27 -5.53 7.11 56.52 0.40 -5.13 16 12 C 0.49 12.05 6.85 -12.54 -0.09 11.96 16 13 O -0.59 -16.20 16.17 -0.50 -0.01 -16.20 16 14 C -0.09 -1.89 5.08 -104.85 -0.53 -2.42 16 15 C -0.03 -0.54 7.19 -39.15 -0.28 -0.82 16 16 C -0.07 -1.24 6.31 -39.53 -0.25 -1.48 16 17 Cl -0.06 -0.90 27.93 -51.86 -1.45 -2.35 16 18 C 0.01 0.14 6.33 -39.38 -0.25 -0.11 16 19 Cl -0.06 -0.79 27.93 -51.86 -1.45 -2.23 16 20 C -0.20 -3.09 8.80 -39.45 -0.35 -3.44 16 21 C 0.18 3.29 6.68 -38.70 -0.26 3.03 16 22 O -0.28 -5.27 9.63 -24.50 -0.24 -5.51 16 23 C 0.02 0.27 9.81 101.05 0.99 1.26 16 24 H 0.02 0.46 8.14 -51.93 -0.42 0.04 16 25 H 0.09 2.35 5.92 -51.93 -0.31 2.04 16 26 H 0.03 0.69 8.14 -51.93 -0.42 0.26 16 27 H 0.10 2.44 5.97 -51.93 -0.31 2.13 16 28 H 0.04 1.03 7.26 -51.93 -0.38 0.65 16 29 H 0.27 6.19 8.31 -40.82 -0.34 5.85 16 30 H 0.16 3.02 7.08 -52.48 -0.37 2.65 16 31 H 0.15 1.76 6.29 -52.48 -0.33 1.43 16 32 H 0.10 1.03 8.14 -51.93 -0.42 0.61 16 33 H 0.06 0.57 7.66 -51.93 -0.40 0.18 16 34 H 0.06 0.57 7.66 -51.93 -0.40 0.17 16 LS Contribution 313.85 15.07 4.73 4.73 Total: -1.00 -27.95 313.85 -7.36 -35.31 By element: Atomic # 1 Polarization: 5.88 SS G_CDS: -3.14 Total: 2.74 kcal Atomic # 6 Polarization: 1.67 SS G_CDS: -0.90 Total: 0.77 kcal Atomic # 7 Polarization: -31.02 SS G_CDS: 0.12 Total: -30.90 kcal Atomic # 8 Polarization: -21.47 SS G_CDS: -0.24 Total: -21.71 kcal Atomic # 14 Polarization: 18.68 SS G_CDS: -5.03 Total: 13.65 kcal Atomic # 17 Polarization: -1.69 SS G_CDS: -2.90 Total: -4.59 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -27.95 -7.36 -35.31 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000267580683.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.464 kcal (2) G-P(sol) polarization free energy of solvation -27.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -28.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.363 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.310 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.773 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds