Wall clock time and date at job start Tue Mar 31 2020 11:48:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53005 * 1 3 3 N 1.46505 * 109.47051 * 2 1 4 4 C 1.37099 * 119.99856 * 271.20377 * 3 2 1 5 5 H 1.07997 * 119.99926 * 184.17502 * 4 3 2 6 6 C 1.38950 * 120.00025 * 4.18598 * 4 3 2 7 7 N 1.31413 * 120.00149 * 31.34323 * 6 4 3 8 8 Si 1.86800 * 119.99618 * 211.35358 * 6 4 3 9 9 H 1.48495 * 109.47497 * 359.97438 * 8 6 4 10 10 H 1.48497 * 109.47138 * 119.99917 * 8 6 4 11 11 H 1.48502 * 109.46723 * 239.99480 * 8 6 4 12 12 C 1.34777 * 119.99704 * 91.21485 * 3 2 1 13 13 O 1.21293 * 119.99650 * 185.60815 * 12 3 2 14 14 C 1.50697 * 120.00237 * 5.60057 * 12 3 2 15 15 H 1.08996 * 109.47139 * 322.62938 * 14 12 3 16 16 O 1.42904 * 109.46969 * 202.62624 * 14 12 3 17 17 C 1.50702 * 109.46899 * 82.63093 * 14 12 3 18 18 C 1.38224 * 119.98732 * 72.15300 * 17 14 12 19 19 C 1.38353 * 120.01402 * 179.72852 * 18 17 14 20 20 Cl 1.73603 * 120.00999 * 180.27415 * 19 18 17 21 21 C 1.38334 * 119.98485 * 0.52390 * 19 18 17 22 22 C 1.38331 * 119.97318 * 359.74778 * 21 19 18 23 23 Cl 1.73602 * 120.00696 * 180.02562 * 22 21 19 24 24 C 1.38216 * 119.98483 * 252.42796 * 17 14 12 25 25 H 1.08995 * 109.46831 * 59.99903 * 1 2 3 26 26 H 1.08997 * 109.46886 * 180.02562 * 1 2 3 27 27 H 1.08998 * 109.46906 * 300.00086 * 1 2 3 28 28 H 1.09005 * 109.47272 * 239.99822 * 2 1 3 29 29 H 1.09000 * 109.46983 * 119.99645 * 2 1 3 30 30 H 0.97003 * 119.99747 * 180.02562 * 7 6 4 31 31 H 0.96702 * 114.00336 * 300.00514 * 16 14 12 32 32 H 1.08001 * 119.99189 * 0.02562 * 18 17 14 33 33 H 1.08004 * 120.01435 * 179.77304 * 21 19 18 34 34 H 1.07994 * 119.99770 * 359.97438 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3813 0.0000 4 6 2.2233 2.0358 -1.1871 5 1 2.6468 3.0293 -1.1897 6 6 1.8861 1.4211 -2.3867 7 7 0.8790 0.5781 -2.4327 8 14 2.8645 1.7928 -3.9339 9 1 3.9391 2.7677 -3.6179 10 1 3.4695 0.5387 -4.4502 11 1 1.9623 2.3677 -4.9639 12 6 2.2663 2.0083 1.1670 13 8 2.5724 3.1820 1.1717 14 6 2.1630 1.2513 2.4659 15 1 1.3302 0.5502 2.4126 16 8 1.9434 2.1713 3.5372 17 6 3.4429 0.4937 2.7089 18 6 4.5924 1.1749 3.0630 19 6 5.7663 0.4793 3.2917 20 17 7.2081 1.3342 3.7434 21 6 5.7922 -0.8970 3.1553 22 6 4.6429 -1.5776 2.7954 23 17 4.6742 -3.3049 2.6246 24 6 3.4682 -0.8814 2.5720 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.8934 -0.5139 -0.8900 29 1 1.8934 -0.5138 0.8900 30 1 0.6438 0.1487 -3.2701 31 1 2.6469 2.8263 3.6437 32 1 4.5729 2.2498 3.1659 33 1 6.7092 -1.4401 3.3301 34 1 2.5709 -1.4127 2.2914 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271029171.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:06 Heat of formation + Delta-G solvation = -57.446423 kcal Electronic energy + Delta-G solvation = -22510.198027 eV Core-core repulsion = 18881.564275 eV Total energy + Delta-G solvation = -3628.633752 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -40.17505 -38.53939 -36.83028 -36.61088 -35.99400 -34.91867 -32.25263 -31.33900 -30.69629 -29.54557 -27.19186 -24.63605 -23.00193 -22.36022 -21.92555 -19.48230 -17.88425 -17.13763 -16.78109 -16.09652 -15.86745 -15.41479 -14.69878 -14.58257 -14.27490 -14.08715 -13.58496 -13.42317 -13.10026 -12.86198 -12.41453 -12.35377 -12.11689 -11.83867 -11.67210 -11.38865 -11.26132 -11.13516 -11.07676 -11.02861 -10.75846 -10.45737 -10.38573 -10.25124 -9.91088 -9.11855 -9.00043 -8.78334 -8.25494 -7.94979 -6.49276 -3.87257 0.93244 0.95481 1.72204 2.18884 3.03773 3.20595 3.26322 3.32246 3.63341 3.99981 4.43530 4.66856 4.74670 4.85469 4.91507 5.01241 5.09241 5.20164 5.42897 5.52194 5.67174 5.85755 5.97086 6.04967 6.30254 6.41814 6.43882 6.52290 6.69280 7.07198 7.35000 7.72671 7.80853 7.95902 8.37258 9.03657 9.27475 9.79699 10.45862 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.011882 B = 0.005038 C = 0.004707 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2355.985876 B = 5556.885315 C = 5947.784621 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.162 4.162 2 C 0.117 3.883 3 N -0.424 5.424 4 C -0.314 4.314 5 H 0.108 0.892 6 C 0.039 3.961 7 N -0.849 5.849 8 Si 0.911 3.089 9 H -0.267 1.267 10 H -0.279 1.279 11 H -0.281 1.281 12 C 0.409 3.591 13 O -0.587 6.587 14 C 0.138 3.862 15 H 0.121 0.879 16 O -0.536 6.536 17 C -0.073 4.073 18 C -0.088 4.088 19 C -0.020 4.020 20 Cl -0.061 7.061 21 C -0.107 4.107 22 C -0.021 4.021 23 Cl -0.061 7.061 24 C -0.094 4.094 25 H 0.113 0.887 26 H 0.038 0.962 27 H 0.023 0.977 28 H 0.089 0.911 29 H 0.038 0.962 30 H 0.269 0.731 31 H 0.379 0.621 32 H 0.142 0.858 33 H 0.143 0.857 34 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.587 -7.273 9.535 13.683 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.220 4.220 2 C -0.007 4.007 3 N -0.142 5.142 4 C -0.441 4.441 5 H 0.125 0.875 6 C -0.166 4.166 7 N -0.487 5.487 8 Si 0.737 3.263 9 H -0.191 1.191 10 H -0.204 1.204 11 H -0.208 1.208 12 C 0.197 3.803 13 O -0.473 6.473 14 C 0.075 3.925 15 H 0.139 0.861 16 O -0.342 6.342 17 C -0.075 4.075 18 C -0.107 4.107 19 C -0.047 4.047 20 Cl -0.032 7.032 21 C -0.126 4.126 22 C -0.048 4.048 23 Cl -0.032 7.032 24 C -0.113 4.113 25 H 0.131 0.869 26 H 0.057 0.943 27 H 0.042 0.958 28 H 0.107 0.893 29 H 0.056 0.944 30 H 0.080 0.920 31 H 0.228 0.772 32 H 0.160 0.840 33 H 0.160 0.840 34 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 6.218 -7.254 9.472 13.454 hybrid contribution 0.979 0.096 -0.973 1.383 sum 7.196 -7.159 8.498 13.239 Atomic orbital electron populations 1.22382 0.95881 1.00247 1.03445 1.21537 0.95294 0.83480 1.00374 1.43894 1.54112 1.11279 1.04871 1.19756 1.39775 1.02998 0.81541 0.87460 1.25201 0.95285 0.96843 0.99290 1.70132 1.21425 1.29625 1.27564 0.86119 0.80526 0.78604 0.81047 1.19083 1.20424 1.20755 1.20208 0.87324 0.88000 0.84774 1.90523 1.54979 1.15864 1.85914 1.20720 0.93908 0.90322 0.87523 0.86104 1.86552 1.50768 1.46368 1.50477 1.20365 0.96181 0.93316 0.97602 1.20955 0.90389 1.01173 0.98147 1.20613 0.88652 0.91844 1.03561 1.98376 1.36842 1.77080 1.90891 1.20824 0.98259 0.92287 1.01280 1.20621 0.94888 0.85208 1.04064 1.98377 1.98764 1.09842 1.96184 1.21082 0.97664 0.93373 0.99149 0.86871 0.94332 0.95833 0.89250 0.94385 0.92046 0.77162 0.83992 0.83967 0.83732 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 18. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -3.25 9.58 37.16 0.36 -2.89 16 2 C 0.12 2.42 5.00 -4.04 -0.02 2.40 16 3 N -0.42 -10.19 2.62 -114.80 -0.30 -10.49 16 4 C -0.31 -8.31 9.40 -14.93 -0.14 -8.45 16 5 H 0.11 3.05 7.36 -52.49 -0.39 2.67 16 6 C 0.04 0.96 4.78 -17.47 -0.08 0.87 16 7 N -0.85 -20.58 8.36 55.50 0.46 -20.12 16 8 Si 0.91 19.64 29.65 -169.99 -5.04 14.60 16 9 H -0.27 -5.88 7.11 56.52 0.40 -5.48 16 10 H -0.28 -5.91 7.11 56.52 0.40 -5.51 16 11 H -0.28 -6.05 7.11 56.52 0.40 -5.64 16 12 C 0.41 9.47 6.73 -10.99 -0.07 9.40 16 13 O -0.59 -15.46 15.95 -13.26 -0.21 -15.67 16 14 C 0.14 2.51 2.89 -29.04 -0.08 2.43 16 15 H 0.12 2.07 6.09 -51.93 -0.32 1.75 16 16 O -0.54 -9.48 13.07 -54.04 -0.71 -10.18 16 17 C -0.07 -1.16 4.84 -104.63 -0.51 -1.66 16 18 C -0.09 -1.32 8.97 -39.54 -0.35 -1.68 16 19 C -0.02 -0.27 6.32 -39.50 -0.25 -0.52 16 20 Cl -0.06 -0.74 28.96 -51.86 -1.50 -2.25 16 21 C -0.11 -1.35 9.62 -39.51 -0.38 -1.73 16 22 C -0.02 -0.27 6.32 -39.50 -0.25 -0.52 16 23 Cl -0.06 -0.71 28.96 -51.86 -1.50 -2.21 16 24 C -0.09 -1.34 8.38 -39.54 -0.33 -1.67 16 25 H 0.11 2.64 5.67 -51.93 -0.29 2.34 16 26 H 0.04 0.67 8.14 -51.93 -0.42 0.24 16 27 H 0.02 0.45 7.74 -51.93 -0.40 0.05 16 28 H 0.09 2.00 6.29 -51.93 -0.33 1.68 16 29 H 0.04 0.67 3.40 -51.93 -0.18 0.49 16 30 H 0.27 6.16 8.31 -40.82 -0.34 5.82 16 31 H 0.38 5.92 7.36 45.56 0.34 6.26 16 32 H 0.14 2.10 7.13 -52.49 -0.37 1.73 16 33 H 0.14 1.49 8.06 -52.48 -0.42 1.07 16 34 H 0.15 1.87 6.56 -52.49 -0.34 1.53 16 LS Contribution 313.83 15.07 4.73 4.73 Total: -1.00 -28.17 313.83 -8.45 -36.62 By element: Atomic # 1 Polarization: 11.25 SS G_CDS: -2.27 Total: 8.99 kcal Atomic # 6 Polarization: -1.90 SS G_CDS: -2.12 Total: -4.02 kcal Atomic # 7 Polarization: -30.77 SS G_CDS: 0.16 Total: -30.61 kcal Atomic # 8 Polarization: -24.93 SS G_CDS: -0.92 Total: -25.85 kcal Atomic # 14 Polarization: 19.64 SS G_CDS: -5.04 Total: 14.60 kcal Atomic # 17 Polarization: -1.45 SS G_CDS: -3.00 Total: -4.46 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -28.17 -8.45 -36.62 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271029171.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.824 kcal (2) G-P(sol) polarization free energy of solvation -28.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.995 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.451 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.623 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds