Wall clock time and date at job start Tue Mar 31 2020 11:48:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 N 1.46498 * 109.47239 * 2 1 4 4 C 1.37099 * 119.99957 * 85.92218 * 3 2 1 5 5 H 1.08001 * 119.99706 * 173.69975 * 4 3 2 6 6 C 1.38953 * 120.00117 * 353.69926 * 4 3 2 7 7 N 1.31405 * 119.99688 * 346.26209 * 6 4 3 8 8 Si 1.86804 * 119.99782 * 166.26728 * 6 4 3 9 9 H 1.48491 * 109.47205 * 359.97438 * 8 6 4 10 10 H 1.48504 * 109.46928 * 119.99912 * 8 6 4 11 11 H 1.48497 * 109.46608 * 239.99613 * 8 6 4 12 12 C 1.34773 * 119.99916 * 265.92018 * 3 2 1 13 13 O 1.21299 * 120.00022 * 184.61470 * 12 3 2 14 14 C 1.50701 * 120.00052 * 4.61441 * 12 3 2 15 15 H 1.08997 * 109.47191 * 35.86058 * 14 12 3 16 16 O 1.42905 * 109.47233 * 155.86222 * 14 12 3 17 17 C 1.50705 * 109.46910 * 275.85746 * 14 12 3 18 18 C 1.38216 * 119.99303 * 287.68379 * 17 14 12 19 19 C 1.38359 * 120.01354 * 179.72407 * 18 17 14 20 20 Cl 1.73601 * 120.00432 * 180.27100 * 19 18 17 21 21 C 1.38324 * 119.98622 * 0.57338 * 19 18 17 22 22 C 1.38331 * 119.97748 * 359.69921 * 21 19 18 23 23 Cl 1.73591 * 120.01163 * 180.02562 * 22 21 19 24 24 C 1.38226 * 119.97981 * 107.95483 * 17 14 12 25 25 H 1.09005 * 109.47033 * 300.00306 * 1 2 3 26 26 H 1.08998 * 109.47374 * 59.99553 * 1 2 3 27 27 H 1.08996 * 109.47685 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46747 * 120.00096 * 2 1 3 29 29 H 1.09005 * 109.47033 * 239.99693 * 2 1 3 30 30 H 0.96998 * 119.99906 * 179.97438 * 7 6 4 31 31 H 0.96696 * 113.99660 * 59.99701 * 16 14 12 32 32 H 1.08007 * 119.98797 * 0.02562 * 18 17 14 33 33 H 1.08003 * 120.01263 * 179.72446 * 21 19 18 34 34 H 1.07997 * 119.99826 * 359.97438 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.1672 2.0556 1.1843 5 1 2.6219 3.0352 1.1944 6 6 1.7331 1.4789 2.3716 7 7 0.9467 0.4265 2.3418 8 14 2.2673 2.1997 4.0101 9 1 3.1455 3.3731 3.7719 10 1 1.0694 2.6251 4.7779 11 1 3.0119 1.1734 4.7830 12 6 2.3212 1.9888 -1.1642 13 8 2.8042 3.1015 -1.1599 14 6 2.0599 1.2859 -2.4714 15 1 1.1455 0.6982 -2.3914 16 8 1.9144 2.2542 -3.5122 17 6 3.2166 0.3744 -2.7915 18 6 4.4272 0.9085 -3.1910 19 6 5.4911 0.0723 -3.4795 20 17 7.0136 0.7437 -3.9744 21 6 5.3395 -1.2990 -3.3795 22 6 4.1260 -1.8333 -2.9851 23 17 3.9350 -3.5540 -2.8587 24 6 3.0646 -0.9958 -2.6909 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3634 -1.0276 0.0005 28 1 1.8932 -0.5139 0.8900 29 1 1.8933 -0.5139 -0.8900 30 1 0.6439 0.0237 3.1706 31 1 2.6922 2.8142 -3.6399 32 1 4.5440 1.9791 -3.2732 33 1 6.1684 -1.9523 -3.6089 34 1 2.1173 -1.4128 -2.3825 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271029173.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:09 Heat of formation + Delta-G solvation = -53.354405 kcal Electronic energy + Delta-G solvation = -22527.606350 eV Core-core repulsion = 18899.150040 eV Total energy + Delta-G solvation = -3628.456309 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.19346 -38.53384 -36.82325 -36.61116 -36.00670 -34.95013 -32.21375 -31.27066 -30.69542 -29.51462 -27.15723 -24.64459 -22.99520 -22.35396 -21.82766 -19.51714 -17.86887 -17.17963 -16.78629 -16.08536 -15.85702 -15.40547 -14.68562 -14.55656 -14.21917 -14.07085 -13.61309 -13.34441 -13.09186 -12.89159 -12.40726 -12.35335 -12.00812 -11.77021 -11.67087 -11.31297 -11.19210 -11.16091 -11.09028 -11.02115 -10.71615 -10.44457 -10.33230 -10.21973 -9.99460 -9.10774 -8.98618 -8.76706 -8.28008 -7.86655 -6.35353 -3.92931 0.93753 0.95978 1.73003 2.19690 3.05186 3.19807 3.26242 3.31823 3.63739 3.99958 4.45223 4.66801 4.79392 4.86268 4.94197 5.05982 5.10301 5.20849 5.43240 5.57061 5.68691 5.89998 5.98592 6.10623 6.31105 6.43920 6.53796 6.63019 6.75542 7.25074 7.42454 7.74622 7.81535 7.95480 8.37758 9.04122 9.28703 9.78381 10.53772 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.012727 B = 0.004906 C = 0.004427 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2199.590649 B = 5705.790874 C = 6323.372457 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C 0.113 3.887 3 N -0.427 5.427 4 C -0.297 4.297 5 H 0.106 0.894 6 C 0.025 3.975 7 N -0.870 5.870 8 Si 0.929 3.071 9 H -0.268 1.268 10 H -0.281 1.281 11 H -0.280 1.280 12 C 0.412 3.588 13 O -0.588 6.588 14 C 0.138 3.862 15 H 0.123 0.877 16 O -0.536 6.536 17 C -0.074 4.074 18 C -0.089 4.089 19 C -0.020 4.020 20 Cl -0.061 7.061 21 C -0.107 4.107 22 C -0.021 4.021 23 Cl -0.060 7.060 24 C -0.093 4.093 25 H 0.105 0.895 26 H 0.016 0.984 27 H 0.037 0.963 28 H 0.107 0.893 29 H 0.034 0.966 30 H 0.267 0.733 31 H 0.379 0.621 32 H 0.142 0.858 33 H 0.142 0.858 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.248 -7.277 -9.701 13.214 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.208 4.208 2 C -0.010 4.010 3 N -0.145 5.145 4 C -0.424 4.424 5 H 0.124 0.876 6 C -0.177 4.177 7 N -0.511 5.511 8 Si 0.755 3.245 9 H -0.192 1.192 10 H -0.207 1.207 11 H -0.206 1.206 12 C 0.200 3.800 13 O -0.474 6.474 14 C 0.076 3.924 15 H 0.140 0.860 16 O -0.341 6.341 17 C -0.076 4.076 18 C -0.107 4.107 19 C -0.047 4.047 20 Cl -0.032 7.032 21 C -0.127 4.127 22 C -0.048 4.048 23 Cl -0.031 7.031 24 C -0.112 4.112 25 H 0.124 0.876 26 H 0.035 0.965 27 H 0.056 0.944 28 H 0.125 0.875 29 H 0.052 0.948 30 H 0.078 0.922 31 H 0.228 0.772 32 H 0.160 0.840 33 H 0.160 0.840 34 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 4.922 -7.225 -9.610 12.991 hybrid contribution 0.797 0.171 0.941 1.244 sum 5.718 -7.054 -8.669 12.554 Atomic orbital electron populations 1.22331 0.96201 0.99992 1.02307 1.21830 0.95142 0.83118 1.00902 1.43890 1.54086 1.11611 1.04923 1.19896 1.36962 1.02945 0.82621 0.87624 1.25293 0.95659 0.96838 0.99882 1.70160 1.30968 1.22512 1.27482 0.85812 0.78624 0.79012 0.81027 1.19250 1.20681 1.20568 1.20279 0.87135 0.87613 0.85009 1.90523 1.49954 1.20659 1.86301 1.20754 0.95991 0.88048 0.87658 0.85976 1.86556 1.44257 1.49955 1.53377 1.20393 0.95835 0.93867 0.97516 1.20955 0.90950 1.00844 0.97989 1.20609 0.88113 0.92664 1.03313 1.98375 1.29678 1.85450 1.89714 1.20822 0.97096 0.93454 1.01293 1.20622 0.95018 0.85263 1.03912 1.98377 1.97625 1.10512 1.96603 1.21103 0.99058 0.92128 0.98890 0.87647 0.96451 0.94436 0.87486 0.94786 0.92249 0.77182 0.84006 0.83971 0.83551 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.04 9.40 37.16 0.35 -2.69 16 2 C 0.11 2.39 4.98 -4.05 -0.02 2.37 16 3 N -0.43 -10.36 2.63 -114.81 -0.30 -10.66 16 4 C -0.30 -7.86 9.52 -14.93 -0.14 -8.00 16 5 H 0.11 2.98 7.21 -52.49 -0.38 2.61 16 6 C 0.02 0.62 5.22 -17.47 -0.09 0.53 16 7 N -0.87 -21.00 7.37 55.50 0.41 -20.59 16 8 Si 0.93 19.90 29.58 -169.99 -5.03 14.87 16 9 H -0.27 -5.86 7.11 56.52 0.40 -5.46 16 10 H -0.28 -5.98 7.11 56.52 0.40 -5.57 16 11 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 12 C 0.41 9.58 6.73 -10.99 -0.07 9.51 16 13 O -0.59 -15.45 15.96 -13.10 -0.21 -15.66 16 14 C 0.14 2.54 2.88 -29.03 -0.08 2.45 16 15 H 0.12 2.14 5.95 -51.93 -0.31 1.83 16 16 O -0.54 -9.52 13.08 -53.87 -0.70 -10.23 16 17 C -0.07 -1.19 4.71 -104.63 -0.49 -1.68 16 18 C -0.09 -1.34 8.97 -39.54 -0.35 -1.69 16 19 C -0.02 -0.27 6.32 -39.51 -0.25 -0.52 16 20 Cl -0.06 -0.75 28.96 -51.86 -1.50 -2.25 16 21 C -0.11 -1.35 9.61 -39.52 -0.38 -1.73 16 22 C -0.02 -0.28 6.32 -39.50 -0.25 -0.53 16 23 Cl -0.06 -0.71 28.96 -51.86 -1.50 -2.21 16 24 C -0.09 -1.33 7.99 -39.54 -0.32 -1.65 16 25 H 0.11 2.46 5.80 -51.93 -0.30 2.16 16 26 H 0.02 0.32 7.29 -51.93 -0.38 -0.06 16 27 H 0.04 0.66 8.14 -51.93 -0.42 0.24 16 28 H 0.11 2.48 6.04 -51.93 -0.31 2.17 16 29 H 0.03 0.62 3.14 -51.93 -0.16 0.45 16 30 H 0.27 6.13 8.31 -40.82 -0.34 5.79 16 31 H 0.38 5.93 7.35 45.56 0.33 6.27 16 32 H 0.14 2.10 7.13 -52.48 -0.37 1.73 16 33 H 0.14 1.49 8.06 -52.48 -0.42 1.07 16 34 H 0.15 1.93 6.70 -52.49 -0.35 1.58 16 LS Contribution 311.62 15.07 4.70 4.70 Total: -1.00 -27.95 311.62 -8.46 -36.41 By element: Atomic # 1 Polarization: 11.49 SS G_CDS: -2.21 Total: 9.27 kcal Atomic # 6 Polarization: -1.54 SS G_CDS: -2.11 Total: -3.65 kcal Atomic # 7 Polarization: -31.36 SS G_CDS: 0.11 Total: -31.25 kcal Atomic # 8 Polarization: -24.97 SS G_CDS: -0.91 Total: -25.89 kcal Atomic # 14 Polarization: 19.90 SS G_CDS: -5.03 Total: 14.87 kcal Atomic # 17 Polarization: -1.46 SS G_CDS: -3.00 Total: -4.46 kcal Total LS contribution 4.70 Total: 4.70 kcal Total: -27.95 -8.46 -36.41 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271029173.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.949 kcal (2) G-P(sol) polarization free energy of solvation -27.945 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -44.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.460 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.405 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds