Wall clock time and date at job start Tue Mar 31 2020 12:16:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50696 * 1 3 3 C 1.35238 * 126.06695 * 2 1 4 4 C 1.40410 * 107.86643 * 179.97438 * 3 2 1 5 5 N 1.40158 * 125.97643 * 179.97438 * 4 3 2 6 6 C 1.34777 * 119.99807 * 0.02562 * 5 4 3 7 7 O 1.21294 * 119.99808 * 359.97438 * 6 5 4 8 8 C 1.50696 * 120.00035 * 180.02562 * 6 5 4 9 9 H 1.08996 * 115.55487 * 34.41195 * 8 6 5 10 10 C 1.53003 * 117.49810 * 180.08437 * 8 6 5 11 11 C 1.53003 * 117.49530 * 248.74329 * 8 6 5 12 12 Cl 1.80298 * 117.50206 * 359.97438 * 11 8 6 13 13 Cl 1.80303 * 117.49790 * 145.02253 * 11 8 6 14 14 N 1.31224 * 108.05286 * 359.97438 * 4 3 2 15 15 N 1.34965 * 126.06958 * 179.97438 * 2 1 3 16 16 C 1.46502 * 125.97705 * 0.05388 * 15 2 1 17 17 C 1.50704 * 109.47007 * 269.98731 * 16 15 2 18 18 H 1.07997 * 119.99914 * 359.97438 * 17 16 15 19 19 C 1.37877 * 119.99779 * 180.02562 * 17 16 15 20 20 N 1.31518 * 120.00139 * 359.97438 * 19 17 16 21 21 Si 1.86798 * 119.99850 * 179.97438 * 19 17 16 22 22 H 1.48498 * 109.47121 * 60.00283 * 21 19 17 23 23 H 1.48501 * 109.46938 * 179.97438 * 21 19 17 24 24 H 1.48497 * 109.47110 * 299.99839 * 21 19 17 25 25 H 1.09007 * 109.47113 * 89.97910 * 1 2 3 26 26 H 1.09000 * 109.47423 * 209.97539 * 1 2 3 27 27 H 1.08999 * 109.47222 * 329.97759 * 1 2 3 28 28 H 1.07998 * 126.07029 * 359.95267 * 3 2 1 29 29 H 0.96999 * 120.00507 * 179.97438 * 5 4 3 30 30 H 1.09000 * 117.49625 * 214.97778 * 10 8 6 31 31 H 1.08994 * 117.49790 * 359.97438 * 10 8 6 32 32 H 1.08998 * 109.46869 * 29.98448 * 16 15 2 33 33 H 1.08994 * 109.47239 * 149.98649 * 16 15 2 34 34 H 0.97001 * 120.00013 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3031 1.0932 0.0000 4 6 3.6370 0.6546 0.0006 5 7 4.7734 1.4749 0.0003 6 6 4.6367 2.8157 -0.0001 7 8 3.5301 3.3124 -0.0007 8 6 5.8585 3.6978 -0.0011 9 1 6.7143 3.3150 -0.5571 10 6 5.6369 5.2117 0.0005 11 6 6.1438 4.5107 1.2634 12 17 4.9922 4.3405 2.6401 13 17 7.8700 4.7626 1.7192 14 7 3.6336 -0.6576 0.0015 15 7 2.3016 -1.0909 0.0005 16 6 1.8500 -2.4846 0.0000 17 6 1.6944 -2.9627 1.4207 18 1 1.9107 -2.2953 2.2418 19 6 1.2769 -4.2525 1.6721 20 7 1.0140 -5.0653 0.6722 21 14 1.0847 -4.8453 3.4331 22 1 0.0833 -4.0013 4.1330 23 1 0.6269 -6.2580 3.4326 24 1 2.3905 -4.7480 4.1335 25 1 -0.3634 0.0004 -1.0277 26 1 -0.3634 -0.8902 0.5134 27 1 -0.3633 0.8898 0.5142 28 1 1.9719 2.1211 -0.0007 29 1 5.6584 1.0777 0.0011 30 1 6.3472 5.8248 -0.5542 31 1 4.6074 5.5696 0.0017 32 1 0.8916 -2.5558 -0.5143 33 1 2.5849 -3.1045 -0.5135 34 1 0.7200 -5.9726 0.8492 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271124225.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:16:37 Heat of formation + Delta-G solvation = 58.030412 kcal Electronic energy + Delta-G solvation = -21249.774092 eV Core-core repulsion = 17658.440542 eV Total energy + Delta-G solvation = -3591.333550 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.044 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -40.89626 -39.83148 -37.58670 -36.38651 -35.54145 -34.88268 -33.40727 -31.49711 -30.88137 -27.02788 -26.40367 -25.17095 -22.87018 -22.70157 -21.02550 -19.91268 -19.29533 -17.72651 -16.72332 -16.45877 -16.08322 -15.50397 -15.19812 -14.90743 -14.30281 -14.05912 -13.76254 -13.31798 -13.05495 -12.64505 -12.49843 -12.41031 -12.36461 -12.14172 -11.71840 -11.55862 -11.44587 -11.23793 -11.11912 -11.00539 -10.84007 -10.51991 -10.35986 -10.25487 -10.01837 -9.71377 -9.58043 -8.65972 -7.99704 -7.52174 -6.27581 -4.35499 0.71784 1.69428 1.91515 2.61628 2.71246 3.00530 3.22483 3.26315 3.30625 3.55702 3.70275 3.81917 3.88981 4.28362 4.47656 4.67147 5.04232 5.06127 5.33446 5.39576 5.66656 5.89658 6.06623 6.16581 6.42852 6.47058 6.65536 6.89399 7.01825 7.35601 7.54440 7.64816 7.86216 8.00456 8.07715 8.59417 8.72119 9.31096 10.79678 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.020035 B = 0.003018 C = 0.002860 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1397.225640 B = 9275.771836 C = 9787.428762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.092 3.908 3 C -0.288 4.288 4 C 0.262 3.738 5 N -0.620 5.620 6 C 0.548 3.452 7 O -0.498 6.498 8 C -0.157 4.157 9 H 0.150 0.850 10 C -0.107 4.107 11 C 0.015 3.985 12 Cl -0.068 7.068 13 Cl -0.086 7.086 14 N -0.317 5.317 15 N -0.315 5.315 16 C 0.259 3.741 17 C -0.538 4.538 18 H 0.064 0.936 19 C 0.066 3.934 20 N -0.892 5.892 21 Si 0.906 3.094 22 H -0.274 1.274 23 H -0.284 1.284 24 H -0.274 1.274 25 H 0.071 0.929 26 H 0.082 0.918 27 H 0.075 0.925 28 H 0.159 0.841 29 H 0.412 0.588 30 H 0.131 0.869 31 H 0.137 0.863 32 H 0.055 0.945 33 H 0.052 0.948 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.408 19.753 -2.407 22.011 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.039 4.039 3 C -0.319 4.319 4 C 0.010 3.990 5 N -0.267 5.267 6 C 0.331 3.669 7 O -0.370 6.370 8 C -0.180 4.180 9 H 0.168 0.832 10 C -0.145 4.145 11 C -0.037 4.037 12 Cl -0.041 7.041 13 Cl -0.059 7.059 14 N -0.148 5.148 15 N -0.097 5.097 16 C 0.141 3.859 17 C -0.577 4.577 18 H 0.082 0.918 19 C -0.137 4.137 20 N -0.529 5.529 21 Si 0.733 3.267 22 H -0.199 1.199 23 H -0.209 1.209 24 H -0.200 1.200 25 H 0.090 0.910 26 H 0.101 0.899 27 H 0.094 0.906 28 H 0.177 0.823 29 H 0.248 0.752 30 H 0.149 0.851 31 H 0.155 0.845 32 H 0.073 0.927 33 H 0.070 0.930 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 9.275 18.743 -2.307 21.040 hybrid contribution 0.207 -0.156 1.133 1.162 sum 9.482 18.588 -1.174 20.900 Atomic orbital electron populations 1.20384 0.87865 1.03934 1.02562 1.21068 0.94960 0.87103 1.00779 1.21221 0.89637 0.99808 1.21258 1.18918 0.86970 0.89588 1.03562 1.42245 1.07886 1.04669 1.71896 1.19082 0.89241 0.81476 0.77069 1.90683 1.25642 1.73723 1.46964 1.23171 1.00550 0.95475 0.98765 0.83235 1.23978 1.05665 0.92107 0.92723 1.26505 0.82694 1.09217 0.85268 1.98806 1.59333 1.97780 1.48141 1.98765 1.16602 1.96789 1.93768 1.77268 1.00033 1.08400 1.29069 1.49022 1.00902 1.07850 1.51944 1.19701 0.96002 0.71241 0.98960 1.21286 1.47025 0.97997 0.91350 0.91776 1.24923 0.94619 0.96034 0.98135 1.69910 1.44767 1.07164 1.31092 0.86412 0.78852 0.77695 0.83726 1.19904 1.20930 1.19958 0.91032 0.89865 0.90596 0.82327 0.75239 0.85081 0.84516 0.92740 0.92963 0.92166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.50 9.89 36.00 0.36 -1.14 16 2 C 0.09 1.91 6.92 -82.28 -0.57 1.34 16 3 C -0.29 -5.75 9.52 -39.83 -0.38 -6.13 16 4 C 0.26 5.17 8.11 -154.38 -1.25 3.91 16 5 N -0.62 -9.16 5.45 -11.13 -0.06 -9.22 16 6 C 0.55 7.21 6.67 -10.99 -0.07 7.14 16 7 O -0.50 -7.90 13.23 5.55 0.07 -7.82 16 8 C -0.16 -1.35 6.03 -91.77 -0.55 -1.91 16 9 H 0.15 0.85 8.14 -51.93 -0.42 0.43 16 10 C -0.11 -0.75 9.73 -26.69 -0.26 -1.01 16 11 C 0.02 0.14 3.62 -26.69 -0.10 0.04 16 12 Cl -0.07 -0.81 28.19 -51.86 -1.46 -2.27 16 13 Cl -0.09 -0.73 29.29 -51.86 -1.52 -2.25 16 14 N -0.32 -7.19 12.59 31.44 0.40 -6.79 16 15 N -0.31 -7.36 3.59 -58.33 -0.21 -7.57 16 16 C 0.26 6.56 5.81 -5.19 -0.03 6.53 16 17 C -0.54 -14.73 9.39 -34.44 -0.32 -15.05 16 18 H 0.06 1.81 7.81 -52.49 -0.41 1.40 16 19 C 0.07 1.80 5.46 -17.82 -0.10 1.70 16 20 N -0.89 -24.89 13.29 55.43 0.74 -24.15 16 21 Si 0.91 21.04 29.54 -169.99 -5.02 16.02 16 22 H -0.27 -6.25 7.11 56.52 0.40 -5.85 16 23 H -0.28 -6.44 7.11 56.52 0.40 -6.04 16 24 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 25 H 0.07 1.05 8.14 -51.93 -0.42 0.63 16 26 H 0.08 1.51 7.71 -51.93 -0.40 1.11 16 27 H 0.08 1.10 8.14 -51.93 -0.42 0.67 16 28 H 0.16 3.05 5.92 -52.49 -0.31 2.73 16 29 H 0.41 4.90 8.82 -40.82 -0.36 4.54 16 30 H 0.13 0.54 8.14 -51.93 -0.42 0.12 16 31 H 0.14 1.07 7.67 -51.93 -0.40 0.67 16 32 H 0.05 1.36 7.65 -51.93 -0.40 0.97 16 33 H 0.05 1.41 8.14 -51.93 -0.42 0.99 16 34 H 0.27 7.09 8.31 -40.82 -0.34 6.75 16 LS Contribution 332.21 15.07 5.01 5.01 Total: -1.00 -31.64 332.21 -8.86 -40.50 By element: Atomic # 1 Polarization: 6.64 SS G_CDS: -3.52 Total: 3.11 kcal Atomic # 6 Polarization: -1.29 SS G_CDS: -3.28 Total: -4.57 kcal Atomic # 7 Polarization: -48.59 SS G_CDS: 0.86 Total: -47.73 kcal Atomic # 8 Polarization: -7.90 SS G_CDS: 0.07 Total: -7.82 kcal Atomic # 14 Polarization: 21.04 SS G_CDS: -5.02 Total: 16.02 kcal Atomic # 17 Polarization: -1.54 SS G_CDS: -2.98 Total: -4.52 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -31.64 -8.86 -40.50 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271124225.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.535 kcal (2) G-P(sol) polarization free energy of solvation -31.642 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.893 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.862 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.504 kcal (6) G-S(sol) free energy of system = (1) + (5) 58.030 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds