Wall clock time and date at job start Tue Mar 31 2020 12:16:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50694 * 1 3 3 C 1.35242 * 126.06704 * 2 1 4 4 C 1.40415 * 107.86404 * 179.97438 * 3 2 1 5 5 N 1.40158 * 125.96854 * 180.02562 * 4 3 2 6 6 C 1.34778 * 120.00475 * 359.97438 * 5 4 3 7 7 O 1.21292 * 119.99450 * 0.02562 * 6 5 4 8 8 C 1.50696 * 120.00247 * 179.97438 * 6 5 4 9 9 H 1.09002 * 115.55213 * 325.67409 * 8 6 5 10 10 C 1.52998 * 117.50040 * 180.02562 * 8 6 5 11 11 C 1.53001 * 60.00149 * 252.51441 * 10 8 6 12 12 Cl 1.80302 * 117.49684 * 252.51384 * 11 10 8 13 13 Cl 1.80290 * 117.50342 * 107.48688 * 11 10 8 14 14 N 1.31215 * 108.05511 * 0.02562 * 4 3 2 15 15 N 1.34967 * 126.07010 * 179.97438 * 2 1 3 16 16 C 1.46494 * 125.97745 * 0.02562 * 15 2 1 17 17 C 1.50708 * 109.47192 * 270.01553 * 16 15 2 18 18 H 1.07999 * 119.99691 * 0.02562 * 17 16 15 19 19 C 1.37876 * 119.99932 * 179.97438 * 17 16 15 20 20 N 1.31509 * 120.00062 * 0.02562 * 19 17 16 21 21 Si 1.86801 * 119.99620 * 179.97438 * 19 17 16 22 22 H 1.48501 * 109.47125 * 90.00099 * 21 19 17 23 23 H 1.48498 * 109.47273 * 209.99912 * 21 19 17 24 24 H 1.48501 * 109.47143 * 330.00731 * 21 19 17 25 25 H 1.08998 * 109.47722 * 90.02188 * 1 2 3 26 26 H 1.09004 * 109.47288 * 210.02670 * 1 2 3 27 27 H 1.09003 * 109.47409 * 330.02154 * 1 2 3 28 28 H 1.07998 * 126.06517 * 0.22601 * 3 2 1 29 29 H 0.97004 * 119.99864 * 180.02562 * 5 4 3 30 30 H 1.09002 * 117.49485 * 359.97438 * 10 8 6 31 31 H 1.08997 * 117.49994 * 145.01981 * 10 8 6 32 32 H 1.09000 * 109.47505 * 30.01115 * 16 15 2 33 33 H 1.08999 * 109.47914 * 150.01197 * 16 15 2 34 34 H 0.97001 * 119.99574 * 179.97438 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.3032 1.0932 0.0000 4 6 3.6370 0.6546 0.0006 5 7 4.7734 1.4750 0.0013 6 6 4.6366 2.8158 0.0009 7 8 3.5300 3.3125 0.0005 8 6 5.8585 3.6979 0.0023 9 1 6.7144 3.3147 0.5579 10 6 5.6369 5.2117 0.0024 11 6 6.1428 4.5127 -1.2611 12 17 7.8686 4.7653 -1.7179 13 17 4.9905 4.3441 -2.6374 14 7 3.6336 -0.6576 0.0004 15 7 2.3016 -1.0909 0.0005 16 6 1.8501 -2.4846 0.0006 17 6 1.6943 -2.9621 1.4215 18 1 1.9098 -2.2941 2.2423 19 6 1.2758 -4.2514 1.6735 20 7 1.0131 -5.0646 0.6740 21 14 1.0835 -4.8434 3.4347 22 1 -0.2991 -4.5681 3.9013 23 1 1.3455 -6.3038 3.4975 24 1 2.0512 -4.1289 4.3056 25 1 -0.3634 -0.0004 -1.0276 26 1 -0.3634 -0.8898 0.5143 27 1 -0.3634 0.8902 0.5135 28 1 1.9718 2.1211 0.0034 29 1 5.6584 1.0778 0.0013 30 1 4.6073 5.5697 0.0010 31 1 6.3473 5.8243 0.5574 32 1 0.8917 -2.5561 -0.5137 33 1 2.5849 -3.1048 -0.5127 34 1 0.7190 -5.9718 0.8513 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000271124228.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 12:16:39 Heat of formation + Delta-G solvation = 57.891546 kcal Electronic energy + Delta-G solvation = -21214.952225 eV Core-core repulsion = 17623.612653 eV Total energy + Delta-G solvation = -3591.339572 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.044 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -40.89714 -39.83492 -37.59885 -36.40487 -35.55479 -34.88415 -33.41221 -31.49860 -30.88367 -27.03124 -26.40430 -25.17520 -22.87408 -22.70814 -21.02779 -19.91292 -19.29831 -17.73294 -16.71829 -16.46336 -16.10974 -15.51377 -15.14311 -14.93777 -14.33509 -14.05140 -13.76846 -13.32986 -13.04628 -12.64842 -12.50849 -12.41337 -12.35343 -12.16527 -11.73334 -11.56924 -11.45224 -11.25503 -11.11168 -11.01742 -10.86570 -10.50516 -10.37547 -10.26665 -10.02072 -9.71407 -9.57144 -8.67068 -7.99736 -7.52153 -6.28168 -4.36056 0.69968 1.67973 1.91278 2.59636 2.73667 2.99307 3.19394 3.26121 3.31352 3.55782 3.69435 3.82039 3.88610 4.27619 4.47521 4.67495 5.04324 5.05628 5.33249 5.39510 5.66539 5.89560 6.06794 6.16505 6.42602 6.47018 6.65444 6.89393 7.01964 7.35584 7.54391 7.64330 7.85747 8.00345 8.07668 8.59359 8.71808 9.30527 10.79157 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.026785 B = 0.002769 C = 0.002692 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1045.102121 B =10108.922015 C =10398.877695 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C 0.092 3.908 3 C -0.288 4.288 4 C 0.262 3.738 5 N -0.620 5.620 6 C 0.548 3.452 7 O -0.497 6.497 8 C -0.157 4.157 9 H 0.150 0.850 10 C -0.107 4.107 11 C 0.016 3.984 12 Cl -0.086 7.086 13 Cl -0.069 7.069 14 N -0.317 5.317 15 N -0.315 5.315 16 C 0.258 3.742 17 C -0.537 4.537 18 H 0.065 0.935 19 C 0.066 3.934 20 N -0.891 5.891 21 Si 0.906 3.094 22 H -0.277 1.277 23 H -0.283 1.283 24 H -0.272 1.272 25 H 0.071 0.929 26 H 0.082 0.918 27 H 0.075 0.925 28 H 0.159 0.841 29 H 0.412 0.588 30 H 0.137 0.863 31 H 0.131 0.869 32 H 0.055 0.945 33 H 0.052 0.948 34 H 0.268 0.732 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.417 19.760 -2.976 22.091 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.039 4.039 3 C -0.319 4.319 4 C 0.010 3.990 5 N -0.267 5.267 6 C 0.331 3.669 7 O -0.370 6.370 8 C -0.179 4.179 9 H 0.168 0.832 10 C -0.145 4.145 11 C -0.036 4.036 12 Cl -0.059 7.059 13 Cl -0.042 7.042 14 N -0.148 5.148 15 N -0.097 5.097 16 C 0.140 3.860 17 C -0.576 4.576 18 H 0.083 0.917 19 C -0.138 4.138 20 N -0.529 5.529 21 Si 0.733 3.267 22 H -0.203 1.203 23 H -0.209 1.209 24 H -0.197 1.197 25 H 0.090 0.910 26 H 0.101 0.899 27 H 0.094 0.906 28 H 0.177 0.823 29 H 0.248 0.752 30 H 0.155 0.845 31 H 0.149 0.851 32 H 0.073 0.927 33 H 0.070 0.930 34 H 0.078 0.922 Dipole moment (debyes) X Y Z Total from point charges 9.289 18.754 -3.186 21.169 hybrid contribution 0.191 -0.162 0.757 0.797 sum 9.479 18.592 -2.429 21.010 Atomic orbital electron populations 1.20383 0.87864 1.03917 1.02579 1.21069 0.94958 0.87103 1.00781 1.21223 0.89636 0.99806 1.21262 1.18915 0.86969 0.89587 1.03557 1.42246 1.07889 1.04667 1.71894 1.19078 0.89235 0.81476 0.77073 1.90683 1.25638 1.73725 1.46961 1.23174 1.00583 0.95474 0.98717 0.83213 1.23971 1.05686 0.92143 0.92671 1.26493 0.82655 1.09267 0.85218 1.98765 1.16632 1.96785 1.93743 1.98801 1.59358 1.97805 1.48227 1.77265 1.00033 1.08403 1.29064 1.49018 1.00900 1.07844 1.51950 1.19708 0.96019 0.71258 0.98982 1.21318 1.46913 0.97996 0.91339 0.91728 1.24929 0.94652 0.96050 0.98139 1.69918 1.44790 1.07138 1.31048 0.86351 0.78680 0.77932 0.83708 1.20278 1.20862 1.19686 0.91046 0.89863 0.90585 0.82326 0.75238 0.84506 0.85060 0.92749 0.92950 0.92219 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -1.50 9.89 36.00 0.36 -1.14 16 2 C 0.09 1.91 6.92 -82.28 -0.57 1.34 16 3 C -0.29 -5.76 9.52 -39.83 -0.38 -6.13 16 4 C 0.26 5.17 8.11 -154.39 -1.25 3.92 16 5 N -0.62 -9.16 5.45 -11.13 -0.06 -9.22 16 6 C 0.55 7.21 6.67 -10.99 -0.07 7.14 16 7 O -0.50 -7.90 13.22 5.55 0.07 -7.82 16 8 C -0.16 -1.35 6.03 -91.77 -0.55 -1.90 16 9 H 0.15 0.87 8.14 -51.93 -0.42 0.45 16 10 C -0.11 -0.75 9.73 -26.73 -0.26 -1.01 16 11 C 0.02 0.14 3.61 -26.73 -0.10 0.04 16 12 Cl -0.09 -0.71 29.29 -51.86 -1.52 -2.23 16 13 Cl -0.07 -0.79 28.18 -51.86 -1.46 -2.25 16 14 N -0.32 -7.19 12.59 31.44 0.40 -6.79 16 15 N -0.31 -7.36 3.59 -58.33 -0.21 -7.57 16 16 C 0.26 6.54 5.81 -5.19 -0.03 6.51 16 17 C -0.54 -14.62 9.39 -34.44 -0.32 -14.95 16 18 H 0.06 1.81 7.81 -52.49 -0.41 1.40 16 19 C 0.07 1.78 5.46 -17.82 -0.10 1.68 16 20 N -0.89 -24.84 13.29 55.43 0.74 -24.10 16 21 Si 0.91 20.88 29.54 -169.99 -5.02 15.86 16 22 H -0.28 -6.24 7.11 56.52 0.40 -5.84 16 23 H -0.28 -6.43 7.11 56.52 0.40 -6.03 16 24 H -0.27 -6.30 7.11 56.52 0.40 -5.90 16 25 H 0.07 1.06 8.14 -51.93 -0.42 0.64 16 26 H 0.08 1.50 7.71 -51.93 -0.40 1.10 16 27 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 28 H 0.16 3.04 5.92 -52.49 -0.31 2.73 16 29 H 0.41 4.89 8.82 -40.82 -0.36 4.53 16 30 H 0.14 1.07 7.67 -51.93 -0.40 0.67 16 31 H 0.13 0.55 8.14 -51.93 -0.42 0.13 16 32 H 0.05 1.37 7.65 -51.93 -0.40 0.97 16 33 H 0.05 1.42 8.14 -51.93 -0.42 1.00 16 34 H 0.27 7.04 8.31 -40.82 -0.34 6.70 16 LS Contribution 332.20 15.07 5.01 5.01 Total: -1.00 -31.53 332.20 -8.86 -40.39 By element: Atomic # 1 Polarization: 6.75 SS G_CDS: -3.52 Total: 3.22 kcal Atomic # 6 Polarization: -1.22 SS G_CDS: -3.28 Total: -4.50 kcal Atomic # 7 Polarization: -48.54 SS G_CDS: 0.86 Total: -47.68 kcal Atomic # 8 Polarization: -7.90 SS G_CDS: 0.07 Total: -7.82 kcal Atomic # 14 Polarization: 20.88 SS G_CDS: -5.02 Total: 15.86 kcal Atomic # 17 Polarization: -1.50 SS G_CDS: -2.98 Total: -4.48 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -31.53 -8.86 -40.39 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000271124228.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.280 kcal (2) G-P(sol) polarization free energy of solvation -31.526 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.754 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.863 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.389 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.892 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds