Wall clock time and date at job start Tue Mar 31 2020 11:55:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35668 * 117.00216 * 2 1 4 4 C 1.38637 * 120.12977 * 0.02562 * 3 2 1 5 5 C 1.38198 * 120.08695 * 179.97438 * 4 3 2 6 6 Cl 1.73601 * 119.82370 * 179.97438 * 5 4 3 7 7 C 1.38794 * 120.35299 * 359.95108 * 5 4 3 8 8 Cl 1.73592 * 119.87244 * 180.02562 * 7 5 4 9 9 C 1.37826 * 120.25989 * 0.04982 * 7 5 4 10 10 C 1.39766 * 119.90486 * 359.71787 * 9 7 5 11 11 C 1.47475 * 120.16926 * 180.25550 * 10 9 7 12 12 O 1.21604 * 119.99748 * 180.25486 * 11 10 9 13 13 N 1.34774 * 120.00185 * 0.25345 * 11 10 9 14 14 C 1.46508 * 120.00021 * 179.97438 * 13 11 10 15 15 C 1.52992 * 109.47456 * 180.02562 * 14 13 11 16 16 C 1.50694 * 109.47476 * 179.97438 * 15 14 13 17 17 H 1.08006 * 119.99638 * 0.02562 * 16 15 14 18 18 C 1.37875 * 120.00382 * 180.02562 * 16 15 14 19 19 N 1.31518 * 119.99813 * 0.02562 * 18 16 15 20 20 Si 1.86800 * 120.00373 * 180.02562 * 18 16 15 21 21 H 1.48500 * 109.46927 * 89.99694 * 20 18 16 22 22 H 1.48492 * 109.47089 * 209.99920 * 20 18 16 23 23 H 1.48505 * 109.46949 * 329.99961 * 20 18 16 24 24 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.46938 * 59.99678 * 1 2 3 26 26 H 1.09004 * 109.46926 * 299.99799 * 1 2 3 27 27 H 1.08002 * 119.95685 * 359.97280 * 4 3 2 28 28 H 1.07999 * 120.04971 * 179.97438 * 9 7 5 29 29 H 0.96992 * 120.00646 * 0.02562 * 13 11 10 30 30 H 1.08997 * 109.47178 * 300.00906 * 14 13 11 31 31 H 1.09005 * 109.46581 * 60.00338 * 14 13 11 32 32 H 1.08999 * 109.46959 * 300.00846 * 15 14 13 33 33 H 1.08998 * 109.46867 * 60.00185 * 15 14 13 34 34 H 0.96999 * 120.00263 * 180.02562 * 19 18 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2088 0.0000 4 6 1.2926 2.3732 0.0005 5 6 1.9210 3.6041 0.0011 6 17 0.9721 5.0579 0.0011 7 6 3.3066 3.6842 0.0021 8 17 4.0829 5.2368 0.0034 9 6 4.0687 2.5358 0.0016 10 6 3.4445 1.2853 0.0059 11 6 4.2542 0.0527 0.0111 12 8 3.7079 -1.0337 0.0102 13 7 5.5997 0.1304 0.0167 14 6 6.4041 -1.0941 0.0224 15 6 7.8897 -0.7284 0.0287 16 6 8.7171 -1.9879 0.0352 17 1 8.2318 -2.9528 0.0344 18 6 10.0935 -1.9086 0.0422 19 7 10.6844 -0.7336 0.0437 20 14 11.1192 -3.4698 0.0495 21 1 11.3980 -3.8853 -1.3487 22 1 12.4007 -3.2168 0.7557 23 1 10.3739 -4.5483 0.7471 24 1 -0.3634 -1.0277 -0.0005 25 1 -0.3633 0.5139 -0.8900 26 1 -0.3633 0.5138 0.8900 27 1 0.2140 2.3184 0.0005 28 1 5.1466 2.6020 0.0019 29 1 6.0356 0.9968 0.0178 30 1 6.1702 -1.6784 0.9123 31 1 6.1779 -1.6814 -0.8676 32 1 8.1238 -0.1439 -0.8610 33 1 8.1155 -0.1413 0.9189 34 1 11.6528 -0.6777 0.0482 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000272999811.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:48 Heat of formation + Delta-G solvation = -68.386965 kcal Electronic energy + Delta-G solvation = -21044.259442 eV Core-core repulsion = 17415.151272 eV Total energy + Delta-G solvation = -3629.108170 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.87546 -38.85022 -38.18927 -36.88679 -36.36260 -34.88648 -32.93434 -31.72295 -30.41743 -29.48013 -27.58669 -25.22117 -23.84071 -22.67923 -21.10480 -20.41442 -18.80848 -17.45319 -17.11424 -16.35621 -16.17032 -15.94057 -15.27206 -14.91964 -14.87847 -14.47833 -14.31379 -14.16996 -13.54354 -13.07557 -13.02234 -12.57877 -12.28438 -12.21692 -12.13481 -11.80487 -11.50497 -11.20986 -11.19646 -11.04273 -10.84634 -10.64539 -10.34145 -9.85131 -9.50557 -9.42519 -9.23132 -8.63385 -8.48871 -8.33701 -6.09493 -4.12325 0.27532 0.71870 1.43962 1.85072 2.61982 2.88833 3.29766 3.35780 3.39085 3.50762 3.60983 4.11686 4.40462 4.45252 4.62458 4.74580 4.85347 4.91254 5.07094 5.16882 5.27704 5.30183 5.47937 5.51068 5.91600 6.32138 6.33795 6.72056 6.85239 6.93550 7.50703 7.60639 7.88335 7.93965 8.26897 8.57748 8.93506 9.52573 11.02096 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.017654 B = 0.003001 C = 0.002571 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1585.663498 B = 9329.227242 C =10889.127422 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.267 6.267 3 C 0.201 3.799 4 C -0.204 4.204 5 C 0.030 3.970 6 Cl -0.042 7.042 7 C -0.079 4.079 8 Cl -0.044 7.044 9 C -0.027 4.027 10 C -0.147 4.147 11 C 0.551 3.449 12 O -0.522 6.522 13 N -0.717 5.717 14 C 0.123 3.877 15 C 0.012 3.988 16 C -0.522 4.522 17 H 0.060 0.940 18 C 0.059 3.941 19 N -0.894 5.894 20 Si 0.897 3.103 21 H -0.280 1.280 22 H -0.286 1.286 23 H -0.272 1.272 24 H 0.107 0.893 25 H 0.059 0.941 26 H 0.059 0.941 27 H 0.153 0.847 28 H 0.156 0.844 29 H 0.395 0.605 30 H 0.059 0.941 31 H 0.059 0.941 32 H 0.023 0.977 33 H 0.023 0.977 34 H 0.262 0.738 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -21.459 12.099 -0.103 24.635 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.177 6.177 3 C 0.151 3.849 4 C -0.224 4.224 5 C 0.001 3.999 6 Cl -0.013 7.013 7 C -0.106 4.106 8 Cl -0.015 7.015 9 C -0.046 4.046 10 C -0.151 4.151 11 C 0.336 3.664 12 O -0.399 6.399 13 N -0.368 5.368 14 C 0.001 3.999 15 C -0.026 4.026 16 C -0.560 4.560 17 H 0.078 0.922 18 C -0.143 4.143 19 N -0.533 5.533 20 Si 0.724 3.276 21 H -0.206 1.206 22 H -0.212 1.212 23 H -0.197 1.197 24 H 0.125 0.875 25 H 0.077 0.923 26 H 0.077 0.923 27 H 0.171 0.829 28 H 0.174 0.826 29 H 0.230 0.770 30 H 0.077 0.923 31 H 0.077 0.923 32 H 0.041 0.959 33 H 0.041 0.959 34 H 0.072 0.928 Dipole moment (debyes) X Y Z Total from point charges -21.594 11.420 -0.098 24.428 hybrid contribution 0.606 0.189 -0.008 0.635 sum -20.988 11.609 -0.106 23.985 Atomic orbital electron populations 1.23277 0.78320 1.04904 1.01389 1.86477 1.21055 1.24240 1.85930 1.18897 0.90821 0.84723 0.90464 1.21013 1.01220 0.89562 1.10605 1.20607 0.89944 0.88635 1.00674 1.98403 1.71474 1.35084 1.96340 1.20420 0.90670 0.88536 1.11015 1.98397 1.80364 1.25716 1.97020 1.21138 1.00850 0.88723 0.93897 1.19640 0.91054 0.94327 1.10125 1.17737 0.82590 0.87853 0.78182 1.90822 1.71627 1.28186 1.49248 1.46269 1.05337 1.11511 1.73697 1.21770 0.92701 0.84385 1.01035 1.19335 0.87367 0.97950 0.97925 1.21039 0.91097 0.92499 1.51389 0.92213 1.24992 0.98017 0.96276 0.94980 1.69952 1.09753 1.23217 1.50334 0.86513 0.79569 0.83294 0.78191 1.20565 1.21180 1.19720 0.87450 0.92289 0.92281 0.82928 0.82612 0.77023 0.92297 0.92295 0.95868 0.95855 0.92831 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.12 9.81 101.05 0.99 1.11 16 2 O -0.27 -3.50 8.56 -40.60 -0.35 -3.84 16 3 C 0.20 2.50 6.70 -38.71 -0.26 2.24 16 4 C -0.20 -1.99 8.80 -39.45 -0.35 -2.34 16 5 C 0.03 0.30 6.32 -39.39 -0.25 0.05 16 6 Cl -0.04 -0.38 27.93 -51.86 -1.45 -1.83 16 7 C -0.08 -0.86 6.31 -39.53 -0.25 -1.11 16 8 Cl -0.04 -0.46 27.93 -51.86 -1.45 -1.91 16 9 C -0.03 -0.31 9.31 -39.16 -0.36 -0.67 16 10 C -0.15 -2.03 5.89 -104.84 -0.62 -2.65 16 11 C 0.55 9.59 7.76 -12.50 -0.10 9.49 16 12 O -0.52 -10.83 15.16 -16.63 -0.25 -11.08 16 13 N -0.72 -12.45 5.51 -61.37 -0.34 -12.79 16 14 C 0.12 2.58 5.61 -4.04 -0.02 2.55 16 15 C 0.01 0.28 5.09 -27.89 -0.14 0.14 16 16 C -0.52 -14.32 9.11 -34.44 -0.31 -14.64 16 17 H 0.06 1.61 7.74 -52.48 -0.41 1.20 16 18 C 0.06 1.65 5.46 -17.82 -0.10 1.55 16 19 N -0.89 -25.91 13.29 55.43 0.74 -25.17 16 20 Si 0.90 21.26 29.54 -169.99 -5.02 16.24 16 21 H -0.28 -6.55 7.11 56.52 0.40 -6.15 16 22 H -0.29 -6.71 7.11 56.52 0.40 -6.31 16 23 H -0.27 -6.36 7.11 56.52 0.40 -5.96 16 24 H 0.11 0.68 8.14 -51.93 -0.42 0.26 16 25 H 0.06 0.34 7.66 -51.93 -0.40 -0.06 16 26 H 0.06 0.34 7.66 -51.93 -0.40 -0.05 16 27 H 0.15 1.07 6.30 -52.49 -0.33 0.74 16 28 H 0.16 1.58 6.40 -52.49 -0.34 1.25 16 29 H 0.40 5.86 6.50 -40.82 -0.27 5.59 16 30 H 0.06 1.28 8.14 -51.93 -0.42 0.86 16 31 H 0.06 1.28 8.14 -51.93 -0.42 0.86 16 32 H 0.02 0.58 8.14 -51.93 -0.42 0.16 16 33 H 0.02 0.59 8.14 -51.93 -0.42 0.17 16 34 H 0.26 7.18 8.31 -40.82 -0.34 6.85 16 LS Contribution 326.68 15.07 4.92 4.92 Total: -1.00 -31.97 326.68 -8.35 -40.31 By element: Atomic # 1 Polarization: 2.78 SS G_CDS: -3.38 Total: -0.60 kcal Atomic # 6 Polarization: -2.48 SS G_CDS: -1.77 Total: -4.25 kcal Atomic # 7 Polarization: -38.35 SS G_CDS: 0.40 Total: -37.96 kcal Atomic # 8 Polarization: -14.33 SS G_CDS: -0.60 Total: -14.93 kcal Atomic # 14 Polarization: 21.26 SS G_CDS: -5.02 Total: 16.24 kcal Atomic # 17 Polarization: -0.84 SS G_CDS: -2.90 Total: -3.74 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -31.97 -8.35 -40.31 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000272999811.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.074 kcal (2) G-P(sol) polarization free energy of solvation -31.967 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.041 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.346 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.313 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.387 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds