Wall clock time and date at job start Tue Mar 31 2020 11:40:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 H 1.08992 * 109.46914 * 2 1 4 4 N 1.46491 * 109.47251 * 120.00149 * 2 1 3 5 5 C 1.34773 * 120.00495 * 277.11824 * 4 2 1 6 6 O 1.21690 * 119.99755 * 359.97438 * 5 4 2 7 7 C 1.46376 * 120.00669 * 180.02562 * 5 4 2 8 8 H 1.07999 * 119.99507 * 0.51587 * 7 5 4 9 9 C 1.40045 * 120.00088 * 180.51614 * 7 5 4 10 10 N 1.30671 * 120.00112 * 0.62613 * 9 7 5 11 11 Si 1.86805 * 119.99818 * 180.62870 * 9 7 5 12 12 H 1.48499 * 109.47288 * 94.74257 * 11 9 7 13 13 H 1.48503 * 109.47083 * 214.74244 * 11 9 7 14 14 H 1.48501 * 109.46840 * 334.73900 * 11 9 7 15 15 C 1.53007 * 109.46819 * 240.00198 * 2 1 3 16 16 H 1.09002 * 109.46990 * 57.25491 * 15 2 1 17 17 O 1.42900 * 109.47083 * 297.25517 * 15 2 1 18 18 C 1.50700 * 109.46985 * 177.25261 * 15 2 1 19 19 C 1.38325 * 120.01334 * 277.65384 * 18 15 2 20 20 Cl 1.73593 * 120.01017 * 359.97438 * 19 18 15 21 21 C 1.38366 * 119.98315 * 179.70212 * 19 18 15 22 22 C 1.38216 * 120.01233 * 0.58857 * 21 19 18 23 23 C 1.38219 * 120.02786 * 359.68114 * 22 21 19 24 24 C 1.38326 * 120.00863 * 97.92073 * 18 15 2 25 25 Cl 1.73601 * 120.01186 * 359.97438 * 24 18 15 26 26 H 1.09001 * 109.47076 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46730 * 299.99404 * 1 2 3 28 28 H 1.08995 * 109.47811 * 59.99860 * 1 2 3 29 29 H 0.97007 * 119.99873 * 97.11741 * 4 2 1 30 30 H 0.97001 * 120.00023 * 180.02562 * 10 9 7 31 31 H 0.96698 * 113.99929 * 325.22618 * 17 15 2 32 32 H 1.08004 * 119.99037 * 180.31864 * 21 19 18 33 33 H 1.08005 * 119.98708 * 179.70468 * 22 21 19 34 34 H 1.08004 * 119.99623 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 7 2.0184 -0.6906 1.1961 5 6 2.1067 -0.0295 2.3672 6 8 1.7812 1.1413 2.4309 7 6 2.5952 -0.7193 3.5622 8 1 2.8927 -1.7559 3.5035 9 6 2.6767 -0.0353 4.7815 10 7 2.3051 1.2153 4.8551 11 14 3.3166 -0.9107 6.3026 12 1 4.7692 -0.6419 6.4541 13 1 2.5936 -0.4136 7.5007 14 1 3.0956 -2.3724 6.1621 15 6 2.0400 -0.7212 -1.2493 16 1 1.6370 -0.2366 -2.1386 17 8 1.6170 -2.0859 -1.2175 18 6 3.5454 -0.6626 -1.2839 19 6 4.1829 0.4638 -1.7722 20 17 3.2490 1.8099 -2.3459 21 6 5.5652 0.5194 -1.7979 22 6 6.3089 -0.5549 -1.3471 23 6 5.6724 -1.6828 -0.8643 24 6 4.2902 -1.7372 -0.8325 25 17 3.4910 -3.1537 -0.2254 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 -0.3634 0.5138 -0.8899 29 1 2.2782 -1.6238 1.1452 30 1 2.3619 1.6893 5.6996 31 1 1.5904 -2.4688 -0.3300 32 1 6.0631 1.4009 -2.1743 33 1 7.3879 -0.5129 -1.3718 34 1 6.2540 -2.5222 -0.5126 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000275008824.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:40:13 Heat of formation + Delta-G solvation = -63.389476 kcal Electronic energy + Delta-G solvation = -22778.350668 eV Core-core repulsion = 19149.459205 eV Total energy + Delta-G solvation = -3628.891463 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.09232 -38.06792 -36.81972 -36.42355 -36.19649 -33.39436 -32.33313 -31.51391 -30.64826 -29.73843 -26.13763 -25.93154 -22.84849 -22.27709 -21.22318 -19.30190 -17.99374 -17.55197 -16.40347 -16.23379 -15.63929 -15.29609 -14.58274 -14.42618 -14.36888 -14.13117 -13.69059 -13.25098 -13.00562 -12.51477 -12.32742 -12.26558 -12.01288 -11.80356 -11.65862 -11.60698 -11.27255 -11.15767 -10.98303 -10.94830 -10.74156 -10.49548 -10.28393 -10.19418 -9.47487 -8.86967 -8.74936 -8.71051 -7.64515 -7.57820 -6.19857 -4.65315 0.97602 1.03934 1.85294 2.28414 3.12357 3.19793 3.23272 3.39779 4.07375 4.34069 4.52420 4.58105 4.74257 4.81993 4.91560 5.09294 5.21020 5.34424 5.42996 5.64006 5.72725 5.91816 5.97030 6.09161 6.12739 6.13849 6.25563 6.49312 6.57685 6.81980 7.42121 7.63966 7.87214 8.05327 8.29440 9.01469 9.46973 10.58365 10.76844 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.013222 B = 0.005552 C = 0.005214 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2117.197548 B = 5042.207841 C = 5368.357259 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.156 4.156 2 C 0.123 3.877 3 H 0.090 0.910 4 N -0.765 5.765 5 C 0.559 3.441 6 O -0.575 6.575 7 C -0.544 4.544 8 H 0.066 0.934 9 C 0.089 3.911 10 N -0.766 5.766 11 Si 0.905 3.095 12 H -0.273 1.273 13 H -0.279 1.279 14 H -0.264 1.264 15 C 0.134 3.866 16 H 0.115 0.885 17 O -0.557 6.557 18 C -0.081 4.081 19 C -0.019 4.019 20 Cl -0.055 7.055 21 C -0.105 4.105 22 C -0.101 4.101 23 C -0.104 4.104 24 C -0.004 4.004 25 Cl -0.042 7.042 26 H 0.053 0.947 27 H 0.069 0.931 28 H 0.052 0.948 29 H 0.373 0.627 30 H 0.268 0.732 31 H 0.375 0.625 32 H 0.139 0.861 33 H 0.140 0.860 34 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.027 -5.257 -13.438 15.637 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.215 4.215 2 C 0.016 3.984 3 H 0.108 0.892 4 N -0.424 5.424 5 C 0.363 3.637 6 O -0.458 6.458 7 C -0.581 4.581 8 H 0.084 0.916 9 C -0.131 4.131 10 N -0.395 5.395 11 Si 0.729 3.271 12 H -0.198 1.198 13 H -0.204 1.204 14 H -0.188 1.188 15 C 0.074 3.926 16 H 0.133 0.867 17 O -0.369 6.369 18 C -0.083 4.083 19 C -0.046 4.046 20 Cl -0.026 7.026 21 C -0.123 4.123 22 C -0.119 4.119 23 C -0.123 4.123 24 C -0.031 4.031 25 Cl -0.013 7.013 26 H 0.072 0.928 27 H 0.088 0.912 28 H 0.071 0.929 29 H 0.208 0.792 30 H 0.079 0.921 31 H 0.230 0.770 32 H 0.157 0.843 33 H 0.158 0.842 34 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 5.551 -4.146 -13.883 15.516 hybrid contribution 0.422 -0.884 1.379 1.691 sum 5.973 -5.029 -12.504 14.742 Atomic orbital electron populations 1.22121 0.95580 1.01677 1.02073 1.21181 0.94152 0.98400 0.84632 0.89180 1.46415 1.73047 1.13999 1.08974 1.18171 0.77924 0.86259 0.81351 1.90600 1.53740 1.16913 1.84500 1.20858 1.46308 0.98340 0.92587 0.91586 1.25676 0.93325 0.94430 0.99655 1.70018 1.34664 1.09034 1.25766 0.86407 0.79241 0.80398 0.81035 1.19820 1.20399 1.18843 1.21248 0.87075 0.84161 1.00134 0.86729 1.86663 1.89675 1.24513 1.36030 1.20167 0.98198 0.92021 0.97929 1.20507 0.92085 0.89561 1.02406 1.98377 1.73214 1.43969 1.87050 1.21101 0.91418 0.99728 1.00091 1.21009 1.00306 0.92275 0.98322 1.21131 0.92110 0.99518 0.99493 1.20443 0.92435 0.89139 1.01113 1.98291 1.79116 1.38126 1.85769 0.92836 0.91182 0.92925 0.79236 0.92149 0.76966 0.84337 0.84184 0.84262 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.16 -2.84 9.34 37.16 0.35 -2.49 16 2 C 0.12 2.40 2.26 -67.93 -0.15 2.24 16 3 H 0.09 1.96 7.07 -51.93 -0.37 1.60 16 4 N -0.76 -17.05 4.54 -55.22 -0.25 -17.30 16 5 C 0.56 15.66 7.68 -12.99 -0.10 15.56 16 6 O -0.58 -18.25 14.70 5.20 0.08 -18.17 16 7 C -0.54 -15.27 9.54 -35.63 -0.34 -15.61 16 8 H 0.07 1.71 7.85 -52.49 -0.41 1.30 16 9 C 0.09 2.47 5.50 -17.37 -0.10 2.37 16 10 N -0.77 -22.79 11.83 55.55 0.66 -22.13 16 11 Si 0.90 20.08 29.56 -169.99 -5.02 15.06 16 12 H -0.27 -5.93 7.11 56.52 0.40 -5.53 16 13 H -0.28 -6.06 7.11 56.52 0.40 -5.66 16 14 H -0.26 -5.67 7.11 56.52 0.40 -5.27 16 15 C 0.13 2.18 2.45 -27.88 -0.07 2.12 16 16 H 0.12 1.72 7.25 -51.93 -0.38 1.34 16 17 O -0.56 -8.95 10.71 -35.23 -0.38 -9.33 16 18 C -0.08 -1.29 4.77 -104.56 -0.50 -1.79 16 19 C -0.02 -0.27 6.31 -39.50 -0.25 -0.52 16 20 Cl -0.06 -0.77 26.87 -51.86 -1.39 -2.16 16 21 C -0.10 -1.29 9.83 -39.54 -0.39 -1.68 16 22 C -0.10 -1.13 10.04 -39.60 -0.40 -1.52 16 23 C -0.10 -1.31 9.83 -39.54 -0.39 -1.69 16 24 C 0.00 -0.07 6.12 -39.50 -0.24 -0.31 16 25 Cl -0.04 -0.61 22.19 -51.86 -1.15 -1.76 16 26 H 0.05 0.91 7.76 -51.93 -0.40 0.50 16 27 H 0.07 1.48 8.12 -51.93 -0.42 1.05 16 28 H 0.05 0.81 8.14 -51.93 -0.42 0.39 16 29 H 0.37 7.55 4.87 -40.82 -0.20 7.35 16 30 H 0.27 7.24 8.29 -40.82 -0.34 6.90 16 31 H 0.38 6.01 4.76 45.56 0.22 6.23 16 32 H 0.14 1.36 8.06 -52.48 -0.42 0.94 16 33 H 0.14 1.10 8.06 -52.48 -0.42 0.67 16 34 H 0.14 1.42 8.06 -52.48 -0.42 1.00 16 LS Contribution 313.66 15.07 4.73 4.73 Total: -1.00 -33.48 313.66 -8.10 -41.58 By element: Atomic # 1 Polarization: 15.60 SS G_CDS: -2.79 Total: 12.81 kcal Atomic # 6 Polarization: -0.74 SS G_CDS: -2.57 Total: -3.32 kcal Atomic # 7 Polarization: -39.84 SS G_CDS: 0.41 Total: -39.43 kcal Atomic # 8 Polarization: -27.20 SS G_CDS: -0.30 Total: -27.50 kcal Atomic # 14 Polarization: 20.08 SS G_CDS: -5.02 Total: 15.06 kcal Atomic # 17 Polarization: -1.37 SS G_CDS: -2.54 Total: -3.92 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -33.48 -8.10 -41.58 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000275008824.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.812 kcal (2) G-P(sol) polarization free energy of solvation -33.479 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.098 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.577 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds