Wall clock time and date at job start Tue Mar 31 2020 11:40:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52995 * 1 3 3 H 1.09000 * 109.47328 * 2 1 4 4 N 1.46501 * 109.47402 * 240.00278 * 2 1 3 5 5 C 1.34774 * 120.00252 * 84.99999 * 4 2 1 6 6 O 1.21693 * 119.99705 * 359.97438 * 5 4 2 7 7 C 1.46370 * 119.99944 * 180.02562 * 5 4 2 8 8 H 1.07994 * 120.00456 * 0.02562 * 7 5 4 9 9 C 1.40056 * 119.99739 * 179.97438 * 7 5 4 10 10 N 1.30665 * 119.99990 * 0.02562 * 9 7 5 11 11 Si 1.86797 * 119.99671 * 179.97438 * 9 7 5 12 12 H 1.48493 * 109.47348 * 60.00662 * 11 9 7 13 13 H 1.48508 * 109.46973 * 180.02562 * 11 9 7 14 14 H 1.48502 * 109.47260 * 299.99985 * 11 9 7 15 15 C 1.52999 * 109.47219 * 120.00055 * 2 1 3 16 16 H 1.09000 * 109.47339 * 175.55162 * 15 2 1 17 17 O 1.42904 * 109.47056 * 55.54983 * 15 2 1 18 18 C 1.50703 * 109.47111 * 295.55154 * 15 2 1 19 19 C 1.38339 * 120.01201 * 81.61137 * 18 15 2 20 20 Cl 1.73606 * 120.00462 * 359.97438 * 19 18 15 21 21 C 1.38356 * 119.98620 * 179.97438 * 19 18 15 22 22 C 1.38224 * 120.01204 * 0.27660 * 21 19 18 23 23 C 1.38217 * 120.02379 * 359.44560 * 22 21 19 24 24 C 1.38329 * 120.01797 * 261.58744 * 18 15 2 25 25 Cl 1.73599 * 120.00107 * 0.02562 * 24 18 15 26 26 H 1.09000 * 109.46934 * 58.27145 * 1 2 3 27 27 H 1.09002 * 109.46934 * 178.26401 * 1 2 3 28 28 H 1.08997 * 109.47175 * 298.27175 * 1 2 3 29 29 H 0.97005 * 119.99494 * 264.99742 * 4 2 1 30 30 H 0.97002 * 120.00335 * 180.02562 * 10 9 7 31 31 H 0.96699 * 114.00041 * 322.25112 * 17 15 2 32 32 H 1.07998 * 119.99282 * 180.02562 * 21 19 18 33 33 H 1.08001 * 119.97933 * 179.70286 * 22 21 19 34 34 H 1.08004 * 119.98976 * 180.25815 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 1 1.8933 1.0276 0.0000 4 7 2.0184 -0.6905 -1.1962 5 6 2.1471 -0.0182 -2.3571 6 8 1.8572 1.1624 -2.4118 7 6 2.6346 -0.7083 -3.5523 8 1 2.8906 -1.7563 -3.5041 9 6 2.7679 -0.0097 -4.7589 10 7 2.4575 1.2582 -4.8174 11 14 3.3906 -0.8903 -6.2840 12 1 2.4747 -2.0105 -6.6175 13 1 3.4406 0.0640 -7.4208 14 1 4.7522 -1.4240 -6.0262 15 6 2.0400 -0.7213 1.2492 16 1 3.1271 -0.7908 1.2103 17 8 1.4802 -2.0350 1.3026 18 6 1.6296 0.0499 2.4772 19 6 0.3546 -0.0979 2.9932 20 17 -0.7734 -1.1713 2.2257 21 6 -0.0214 0.6100 4.1209 22 6 0.8748 1.4690 4.7287 23 6 2.1507 1.6127 4.2170 24 6 2.5279 0.9055 3.0894 25 17 4.1281 1.0916 2.4426 26 1 -0.3633 0.5404 -0.8741 27 1 -0.3633 -1.0272 -0.0311 28 1 -0.3633 0.4867 0.9050 29 1 2.2491 -1.6317 -1.1526 30 1 2.5495 1.7420 -5.6531 31 1 0.5620 -2.0838 1.0034 32 1 -1.0166 0.4944 4.5240 33 1 0.5792 2.0250 5.6062 34 1 2.8519 2.2810 4.6948 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000275008831.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:40:16 Heat of formation + Delta-G solvation = -59.106864 kcal Electronic energy + Delta-G solvation = -22298.912778 eV Core-core repulsion = 18670.207023 eV Total energy + Delta-G solvation = -3628.705755 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -40.30825 -38.10150 -37.02805 -36.52041 -36.31377 -33.39474 -32.33538 -31.72291 -30.86893 -29.38542 -26.51143 -25.95827 -23.04592 -22.67044 -20.80120 -19.36907 -17.80760 -17.66512 -16.64892 -16.38574 -15.68054 -15.30712 -14.91679 -14.55135 -14.46800 -14.28480 -13.93487 -13.55626 -13.06174 -12.60371 -12.41948 -12.32170 -11.96469 -11.90998 -11.80169 -11.55799 -11.21200 -11.06803 -10.97899 -10.84070 -10.65422 -10.44296 -10.25459 -10.02619 -9.86047 -8.95765 -8.91260 -8.82852 -7.61017 -7.52566 -6.16925 -4.62287 0.75494 0.81371 1.67027 2.10823 3.17256 3.17689 3.22277 3.24357 4.09316 4.27122 4.49412 4.55613 4.60349 4.70977 4.90480 4.99898 5.12826 5.19294 5.31370 5.41729 5.69338 5.78336 5.81231 5.92097 5.94667 6.12380 6.21516 6.29002 6.51481 6.79204 7.45306 7.72376 7.94778 8.09298 8.34521 9.04279 9.54950 10.61544 10.79977 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.019152 B = 0.004150 C = 0.003727 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1461.669908 B = 6746.023115 C = 7510.741827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.131 3.869 3 H 0.087 0.913 4 N -0.758 5.758 5 C 0.557 3.443 6 O -0.579 6.579 7 C -0.544 4.544 8 H 0.067 0.933 9 C 0.088 3.912 10 N -0.768 5.768 11 Si 0.907 3.093 12 H -0.268 1.268 13 H -0.281 1.281 14 H -0.268 1.268 15 C 0.131 3.869 16 H 0.118 0.882 17 O -0.557 6.557 18 C -0.083 4.083 19 C -0.012 4.012 20 Cl -0.044 7.044 21 C -0.106 4.106 22 C -0.100 4.100 23 C -0.104 4.104 24 C -0.019 4.019 25 Cl -0.046 7.046 26 H 0.068 0.932 27 H 0.051 0.949 28 H 0.058 0.942 29 H 0.384 0.616 30 H 0.268 0.732 31 H 0.373 0.627 32 H 0.140 0.860 33 H 0.142 0.858 34 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.543 -1.783 19.276 19.680 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.024 3.976 3 H 0.105 0.895 4 N -0.413 5.413 5 C 0.361 3.639 6 O -0.462 6.462 7 C -0.581 4.581 8 H 0.086 0.914 9 C -0.131 4.131 10 N -0.397 5.397 11 Si 0.732 3.268 12 H -0.193 1.193 13 H -0.206 1.206 14 H -0.193 1.193 15 C 0.071 3.929 16 H 0.136 0.864 17 O -0.371 6.371 18 C -0.086 4.086 19 C -0.039 4.039 20 Cl -0.015 7.015 21 C -0.125 4.125 22 C -0.119 4.119 23 C -0.123 4.123 24 C -0.046 4.046 25 Cl -0.016 7.016 26 H 0.087 0.913 27 H 0.070 0.930 28 H 0.077 0.923 29 H 0.216 0.784 30 H 0.079 0.921 31 H 0.229 0.771 32 H 0.158 0.842 33 H 0.159 0.841 34 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -3.166 -0.954 19.182 19.465 hybrid contribution -0.109 -0.749 -1.012 1.264 sum -3.274 -1.703 18.169 18.540 Atomic orbital electron populations 1.22818 0.96726 1.01103 1.02592 1.21001 0.93536 0.98151 0.84944 0.89521 1.46160 1.73165 1.13080 1.08906 1.18213 0.77797 0.86381 0.81515 1.90597 1.54794 1.16389 1.84385 1.20845 1.46881 0.97158 0.93256 0.91444 1.25690 0.93325 0.94453 0.99659 1.70007 1.35181 1.08171 1.26314 0.86445 0.79924 0.79710 0.80732 1.19297 1.20601 1.19283 1.21307 0.99648 0.82389 0.89543 0.86408 1.86597 1.34240 1.27470 1.88759 1.20273 0.91900 0.97646 0.98758 1.20513 0.90558 0.96686 0.96161 1.98313 1.59736 1.63856 1.79550 1.21139 1.00954 0.96222 0.94208 1.21046 0.92509 0.98117 1.00179 1.21160 0.97266 0.99167 0.94730 1.20649 0.87915 0.99662 0.96358 1.98412 1.21256 1.96200 1.85764 0.91271 0.93046 0.92341 0.78385 0.92103 0.77066 0.84209 0.84062 0.84143 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -3.11 7.50 37.16 0.28 -2.83 16 2 C 0.13 2.55 2.43 -67.93 -0.17 2.39 16 3 H 0.09 1.92 7.58 -51.93 -0.39 1.53 16 4 N -0.76 -17.13 5.05 -55.22 -0.28 -17.41 16 5 C 0.56 15.80 7.71 -12.99 -0.10 15.70 16 6 O -0.58 -18.56 14.68 5.20 0.08 -18.49 16 7 C -0.54 -15.46 9.54 -35.63 -0.34 -15.80 16 8 H 0.07 1.76 7.85 -52.49 -0.41 1.35 16 9 C 0.09 2.48 5.50 -17.37 -0.10 2.38 16 10 N -0.77 -23.08 11.83 55.55 0.66 -22.43 16 11 Si 0.91 20.31 29.56 -169.99 -5.02 15.29 16 12 H -0.27 -5.85 7.11 56.52 0.40 -5.44 16 13 H -0.28 -6.14 7.11 56.52 0.40 -5.74 16 14 H -0.27 -5.85 7.11 56.52 0.40 -5.45 16 15 C 0.13 2.14 2.91 -27.88 -0.08 2.06 16 16 H 0.12 1.99 6.57 -51.93 -0.34 1.65 16 17 O -0.56 -8.95 12.15 -35.23 -0.43 -9.37 16 18 C -0.08 -1.18 4.79 -104.55 -0.50 -1.68 16 19 C -0.01 -0.15 5.08 -39.50 -0.20 -0.35 16 20 Cl -0.04 -0.53 20.43 -51.86 -1.06 -1.59 16 21 C -0.11 -1.03 9.83 -39.54 -0.39 -1.42 16 22 C -0.10 -0.85 10.04 -39.59 -0.40 -1.25 16 23 C -0.10 -1.04 9.83 -39.55 -0.39 -1.43 16 24 C -0.02 -0.24 6.31 -39.51 -0.25 -0.49 16 25 Cl -0.05 -0.62 27.16 -51.86 -1.41 -2.03 16 26 H 0.07 1.45 8.14 -51.93 -0.42 1.03 16 27 H 0.05 0.83 5.42 -51.93 -0.28 0.55 16 28 H 0.06 0.91 4.80 -51.93 -0.25 0.66 16 29 H 0.38 7.96 8.34 -40.82 -0.34 7.62 16 30 H 0.27 7.35 8.29 -40.82 -0.34 7.01 16 31 H 0.37 5.59 4.03 45.56 0.18 5.77 16 32 H 0.14 1.01 8.06 -52.49 -0.42 0.59 16 33 H 0.14 0.73 8.06 -52.49 -0.42 0.31 16 34 H 0.14 1.07 8.06 -52.48 -0.42 0.65 16 LS Contribution 308.86 15.07 4.65 4.65 Total: -1.00 -33.90 308.86 -8.10 -42.00 By element: Atomic # 1 Polarization: 14.75 SS G_CDS: -2.66 Total: 12.09 kcal Atomic # 6 Polarization: -0.09 SS G_CDS: -2.63 Total: -2.72 kcal Atomic # 7 Polarization: -40.22 SS G_CDS: 0.38 Total: -39.84 kcal Atomic # 8 Polarization: -27.51 SS G_CDS: -0.35 Total: -27.86 kcal Atomic # 14 Polarization: 20.31 SS G_CDS: -5.02 Total: 15.29 kcal Atomic # 17 Polarization: -1.15 SS G_CDS: -2.47 Total: -3.62 kcal Total LS contribution 4.65 Total: 4.65 kcal Total: -33.90 -8.10 -42.00 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000275008831.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.104 kcal (2) G-P(sol) polarization free energy of solvation -33.902 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.007 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.100 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -42.002 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.107 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds