Wall clock time and date at job start Tue Mar 31 2020 10:57:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53001 * 1 3 3 C 1.50700 * 109.46915 * 2 1 4 4 O 1.21263 * 120.00343 * 0.02562 * 3 2 1 5 5 C 1.47089 * 119.99745 * 179.97438 * 3 2 1 6 6 C 1.39917 * 120.16088 * 0.02562 * 5 3 2 7 7 C 1.37792 * 119.84453 * 179.97438 * 6 5 3 8 8 C 1.38590 * 120.15169 * 359.97438 * 7 6 5 9 9 Cl 1.73602 * 119.83767 * 179.97438 * 8 7 6 10 10 C 1.38546 * 120.32583 * 359.97438 * 8 7 6 11 11 S 1.76198 * 119.92316 * 180.02562 * 10 8 7 12 12 O 1.42097 * 106.40522 * 182.56523 * 11 10 8 13 13 O 1.42108 * 106.40428 * 49.64578 * 11 10 8 14 14 N 1.65597 * 107.22056 * 296.10677 * 11 10 8 15 15 C 1.36940 * 120.00041 * 295.31971 * 14 11 10 16 16 H 1.08000 * 119.99912 * 5.50705 * 15 14 11 17 17 C 1.38812 * 119.99936 * 185.51204 * 15 14 11 18 18 N 1.31612 * 120.00022 * 359.97438 * 17 15 14 19 19 Si 1.86801 * 119.99927 * 179.97438 * 17 15 14 20 20 H 1.48501 * 109.46985 * 59.99302 * 19 17 15 21 21 H 1.48493 * 109.47382 * 179.97438 * 19 17 15 22 22 H 1.48504 * 109.46769 * 299.99984 * 19 17 15 23 23 C 1.37834 * 120.15474 * 0.27610 * 10 8 7 24 24 H 1.09007 * 109.46861 * 179.97438 * 1 2 3 25 25 H 1.08999 * 109.47179 * 299.99409 * 1 2 3 26 26 H 1.08993 * 109.47202 * 60.00171 * 1 2 3 27 27 H 1.09005 * 109.46808 * 240.00389 * 2 1 3 28 28 H 1.09003 * 109.47150 * 120.00595 * 2 1 3 29 29 H 1.07999 * 120.08000 * 359.97131 * 6 5 3 30 30 H 1.07991 * 119.92534 * 179.97438 * 7 6 5 31 31 H 0.96999 * 120.00036 * 115.31197 * 14 11 10 32 32 H 0.97001 * 119.99885 * 180.02562 * 18 17 15 33 33 H 1.07998 * 120.07718 * 179.72755 * 23 10 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0323 1.4208 0.0000 4 8 1.2443 2.3425 0.0005 5 6 3.4784 1.6896 0.0006 6 6 4.3906 0.6287 0.0006 7 6 5.7439 0.8879 0.0006 8 6 6.2022 2.1959 0.0000 9 17 7.9089 2.5131 0.0007 10 6 5.3048 3.2515 -0.0010 11 16 5.8990 4.9102 -0.0024 12 8 4.7524 5.7473 0.0577 13 8 6.8656 4.9894 -1.0412 14 7 6.7194 5.1382 1.4179 15 6 6.0511 5.0794 2.6117 16 1 5.0089 4.7968 2.6337 17 6 6.7131 5.3829 3.7934 18 7 7.9832 5.7268 3.7666 19 14 5.8013 5.3033 5.4218 20 1 5.2944 3.9243 5.6384 21 1 6.7253 5.6695 6.5250 22 1 4.6592 6.2521 5.3964 23 6 3.9483 3.0071 0.0042 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3633 0.5137 0.8900 26 1 -0.3633 0.5138 -0.8899 27 1 1.8933 -0.5138 -0.8901 28 1 1.8934 -0.5139 0.8900 29 1 4.0349 -0.3911 0.0006 30 1 6.4491 0.0701 0.0010 31 1 7.6734 5.3134 1.4043 32 1 8.4459 5.9385 4.5924 33 1 3.2500 3.8309 0.0078 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000280220167.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 10:57:40 Heat of formation + Delta-G solvation = -94.268454 kcal Electronic energy + Delta-G solvation = -22107.301068 eV Core-core repulsion = 18479.114299 eV Total energy + Delta-G solvation = -3628.186769 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.032 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -40.11270 -38.34528 -36.45114 -35.97431 -34.76854 -34.68664 -33.20981 -31.21916 -31.08671 -30.94490 -25.64084 -24.58014 -23.47190 -22.46685 -20.10188 -18.46124 -18.20590 -17.65779 -16.58786 -16.25088 -15.85670 -15.61206 -15.45585 -14.77096 -14.57287 -14.15478 -13.95753 -13.70379 -13.45671 -13.05622 -12.66704 -12.50406 -12.08480 -12.01436 -11.66262 -11.38265 -11.36614 -11.30799 -11.18963 -11.07399 -11.02379 -10.83755 -10.62267 -10.37798 -10.13761 -10.04476 -9.68228 -9.31666 -8.76210 -8.33387 -6.52667 -3.94845 0.43832 1.04886 1.43755 2.13918 2.21965 3.16401 3.19712 3.23329 3.50947 3.83604 3.99319 4.36099 4.57796 4.67571 4.76040 4.83957 4.88408 4.98085 5.07789 5.18261 5.31090 5.54038 5.58793 5.64120 5.70746 5.83512 5.94030 5.98348 6.08562 6.16647 6.62967 6.95764 7.42345 7.44431 8.60043 8.72426 9.15830 10.62500 Molecular weight = 317.03amu Principal moments of inertia in cm(-1) A = 0.012279 B = 0.005631 C = 0.004775 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2279.779713 B = 4971.474490 C = 5862.822623 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.169 4.169 3 C 0.396 3.604 4 O -0.447 6.447 5 C -0.199 4.199 6 C -0.029 4.029 7 C -0.148 4.148 8 C 0.086 3.914 9 Cl -0.035 7.035 10 C -0.667 4.667 11 S 2.602 3.398 12 O -0.965 6.965 13 O -0.985 6.985 14 N -0.935 5.935 15 C -0.275 4.275 16 H 0.103 0.897 17 C 0.035 3.965 18 N -0.871 5.871 19 Si 0.922 3.078 20 H -0.272 1.272 21 H -0.281 1.281 22 H -0.269 1.269 23 C 0.041 3.959 24 H 0.060 0.940 25 H 0.061 0.939 26 H 0.060 0.940 27 H 0.098 0.902 28 H 0.100 0.900 29 H 0.141 0.859 30 H 0.142 0.858 31 H 0.410 0.590 32 H 0.276 0.724 33 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.894 -13.928 -4.535 15.789 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.202 4.202 2 C -0.207 4.207 3 C 0.273 3.727 4 O -0.321 6.321 5 C -0.200 4.200 6 C -0.048 4.048 7 C -0.167 4.167 8 C 0.058 3.942 9 Cl -0.005 7.005 10 C -0.744 4.744 11 S 2.689 3.311 12 O -0.955 6.955 13 O -0.973 6.973 14 N -0.688 5.688 15 C -0.415 4.415 16 H 0.120 0.880 17 C -0.173 4.173 18 N -0.512 5.512 19 Si 0.748 3.252 20 H -0.198 1.198 21 H -0.206 1.206 22 H -0.194 1.194 23 C 0.022 3.978 24 H 0.079 0.921 25 H 0.080 0.920 26 H 0.079 0.921 27 H 0.117 0.883 28 H 0.118 0.882 29 H 0.159 0.841 30 H 0.160 0.840 31 H 0.246 0.754 32 H 0.086 0.914 33 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -6.385 -12.893 -5.261 15.319 hybrid contribution 0.324 -0.940 1.201 1.559 sum -6.061 -13.832 -4.060 15.638 Atomic orbital electron populations 1.21597 0.93547 1.01723 1.03285 1.21992 0.98467 0.95628 1.04601 1.22438 0.87499 0.91348 0.71411 1.90550 1.58100 1.47717 1.35759 1.20687 0.95274 0.94583 1.09497 1.21460 0.92139 0.98748 0.92430 1.21076 0.96204 0.95159 1.04311 1.20785 0.85869 0.93989 0.93577 1.98450 1.10775 1.95633 1.95661 1.32225 1.00753 1.28424 1.13001 1.06977 0.73707 0.76035 0.74373 1.93486 1.51065 1.63751 1.87158 1.93471 1.60169 1.87071 1.56630 1.51858 1.21230 1.75481 1.20251 1.19290 0.94761 1.43549 0.83912 0.87976 1.25212 0.95688 0.97084 0.99313 1.69688 1.09164 1.43000 1.29362 0.86061 0.79283 0.79112 0.80760 1.19770 1.20573 1.19367 1.21229 0.93498 0.96970 0.86140 0.92074 0.91959 0.92055 0.88330 0.88228 0.84122 0.84009 0.75371 0.91387 0.82620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 31. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -1.25 9.20 37.16 0.34 -0.90 16 2 C -0.17 -1.44 5.03 -27.88 -0.14 -1.58 16 3 C 0.40 5.26 7.11 -30.72 -0.22 5.04 16 4 O -0.45 -7.45 15.97 5.57 0.09 -7.36 16 5 C -0.20 -2.90 5.87 -105.06 -0.62 -3.52 16 6 C -0.03 -0.34 9.47 -39.12 -0.37 -0.71 16 7 C -0.15 -2.00 9.81 -39.61 -0.39 -2.38 16 8 C 0.09 1.51 6.31 -39.34 -0.25 1.26 16 9 Cl -0.03 -0.62 26.41 -51.86 -1.37 -1.99 16 10 C -0.67 -13.05 5.81 -39.62 -0.23 -13.28 16 11 S 2.60 58.95 5.01 -107.50 -0.54 58.41 16 12 O -0.96 -23.96 16.67 -57.17 -0.95 -24.91 16 13 O -0.98 -23.17 16.56 -57.17 -0.95 -24.11 16 14 N -0.94 -22.47 5.43 31.50 0.17 -22.30 16 15 C -0.27 -6.87 9.63 -15.06 -0.15 -7.02 16 16 H 0.10 2.46 7.82 -52.49 -0.41 2.05 16 17 C 0.04 0.89 5.50 -17.43 -0.10 0.79 16 18 N -0.87 -22.60 13.06 55.49 0.72 -21.88 16 19 Si 0.92 19.48 29.55 -169.99 -5.02 14.45 16 20 H -0.27 -5.61 7.11 56.52 0.40 -5.21 16 21 H -0.28 -5.84 7.11 56.52 0.40 -5.44 16 22 H -0.27 -5.68 7.11 56.52 0.40 -5.28 16 23 C 0.04 0.74 9.09 -39.12 -0.36 0.39 16 24 H 0.06 0.39 8.14 -51.92 -0.42 -0.03 16 25 H 0.06 0.60 8.10 -51.93 -0.42 0.18 16 26 H 0.06 0.58 8.10 -51.93 -0.42 0.16 16 27 H 0.10 0.62 8.09 -51.93 -0.42 0.20 16 28 H 0.10 0.66 8.09 -51.93 -0.42 0.24 16 29 H 0.14 1.01 7.05 -52.49 -0.37 0.64 16 30 H 0.14 1.46 8.06 -52.49 -0.42 1.04 16 31 H 0.41 9.98 8.04 -34.47 -0.28 9.71 16 32 H 0.28 6.75 8.31 -40.82 -0.34 6.41 16 33 H 0.16 2.96 6.91 -52.49 -0.36 2.60 16 LS Contribution 319.54 15.07 4.82 4.82 Total: -1.00 -30.96 319.54 -8.58 -39.54 By element: Atomic # 1 Polarization: 10.35 SS G_CDS: -3.08 Total: 7.27 kcal Atomic # 6 Polarization: -19.47 SS G_CDS: -2.47 Total: -21.93 kcal Atomic # 7 Polarization: -45.07 SS G_CDS: 0.90 Total: -44.18 kcal Atomic # 8 Polarization: -54.57 SS G_CDS: -1.81 Total: -56.38 kcal Atomic # 14 Polarization: 19.48 SS G_CDS: -5.02 Total: 14.45 kcal Atomic # 16 Polarization: 58.95 SS G_CDS: -0.54 Total: 58.41 kcal Atomic # 17 Polarization: -0.62 SS G_CDS: -1.37 Total: -1.99 kcal Total LS contribution 4.82 Total: 4.82 kcal Total: -30.96 -8.58 -39.54 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000280220167.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.729 kcal (2) G-P(sol) polarization free energy of solvation -30.958 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -85.688 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.581 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.539 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.268 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds