Wall clock time and date at job start Tue Mar 31 2020 11:55:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.36012 * 116.99695 * 2 1 4 4 C 1.38788 * 119.99326 * 90.00718 * 3 2 1 5 5 Cl 1.73601 * 119.99525 * 359.97105 * 4 3 2 6 6 C 1.38209 * 120.00571 * 179.97438 * 4 3 2 7 7 C 1.38831 * 119.99134 * 359.97438 * 6 4 3 8 8 N 1.40111 * 120.00501 * 180.02562 * 7 6 4 9 9 C 1.34778 * 119.99898 * 35.08460 * 8 7 6 10 10 O 1.21291 * 120.00168 * 355.38627 * 9 8 7 11 11 C 1.50703 * 120.00057 * 175.10433 * 9 8 7 12 12 C 1.52996 * 109.47043 * 180.27980 * 11 9 8 13 13 C 1.50703 * 109.47043 * 179.97438 * 12 11 9 14 14 H 1.07999 * 119.99614 * 0.02562 * 13 12 11 15 15 C 1.37877 * 119.99902 * 180.02562 * 13 12 11 16 16 N 1.31513 * 119.99950 * 359.97438 * 15 13 12 17 17 Si 1.86802 * 119.99738 * 180.02562 * 15 13 12 18 18 H 1.48504 * 109.47034 * 89.99743 * 17 15 13 19 19 H 1.48501 * 109.47031 * 209.99571 * 17 15 13 20 20 H 1.48498 * 109.46971 * 329.99897 * 17 15 13 21 21 C 1.38841 * 119.99140 * 0.27392 * 7 6 4 22 22 C 1.38206 * 119.98862 * 359.47433 * 21 7 6 23 23 Cl 1.73601 * 119.99302 * 180.27812 * 22 21 7 24 24 H 1.09005 * 109.47345 * 300.00087 * 1 2 3 25 25 H 1.08996 * 109.47362 * 59.99816 * 1 2 3 26 26 H 1.09003 * 109.47618 * 179.97438 * 1 2 3 27 27 H 1.08000 * 119.99754 * 179.97438 * 6 4 3 28 28 H 0.97000 * 120.00278 * 215.09309 * 8 7 6 29 29 H 1.08996 * 109.46832 * 300.27885 * 11 9 8 30 30 H 1.08992 * 109.47023 * 60.27828 * 11 9 8 31 31 H 1.09002 * 109.47476 * 300.00030 * 12 11 9 32 32 H 1.09000 * 109.47189 * 60.00315 * 12 11 9 33 33 H 0.97004 * 119.99798 * 180.02562 * 16 15 13 34 34 H 1.07994 * 120.00031 * 179.72318 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2119 0.0000 4 6 2.3615 1.8300 1.2020 5 17 1.9668 1.0566 2.7053 6 6 2.9894 3.0613 1.2023 7 6 3.3053 3.6794 0.0001 8 7 3.9423 4.9274 0.0000 9 6 4.8460 5.2227 0.9554 10 8 5.0467 4.4427 1.8623 11 6 5.6117 6.5193 0.8933 12 6 6.5694 6.6033 2.0835 13 6 7.3356 7.8996 2.0211 14 1 7.1569 8.5941 1.2136 15 6 8.2647 8.1988 2.9949 16 7 8.4818 7.3532 3.9785 17 14 9.2138 9.8059 2.9179 18 1 8.4685 10.8568 3.6564 19 1 10.5514 9.6208 3.5359 20 1 9.3760 10.2175 1.5004 21 6 2.9854 3.0632 -1.2023 22 6 2.3622 1.8296 -1.2019 23 17 1.9686 1.0558 -2.7052 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 -0.0005 27 1 3.2341 3.5424 2.1378 28 1 3.7329 5.5788 -0.6875 29 1 6.1813 6.5607 -0.0350 30 1 4.9136 7.3555 0.9289 31 1 5.9999 6.5618 3.0119 32 1 7.2676 5.7670 2.0478 33 1 9.1352 7.5639 4.6638 34 1 3.2271 3.5460 -2.1376 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000291771714.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:45 Heat of formation + Delta-G solvation = -65.625582 kcal Electronic energy + Delta-G solvation = -21006.339779 eV Core-core repulsion = 17377.351351 eV Total energy + Delta-G solvation = -3628.988427 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.76933 -39.50442 -37.54226 -36.95851 -36.52510 -34.30401 -33.59893 -31.25991 -30.93944 -29.42239 -27.10288 -25.71743 -23.56116 -22.96262 -21.49665 -19.98575 -18.43902 -17.78685 -17.35162 -16.60952 -16.00524 -15.77532 -15.29228 -15.10483 -14.53558 -14.44259 -14.27112 -13.96884 -13.64742 -13.44506 -12.65645 -12.54021 -12.26583 -12.24403 -12.09300 -11.50068 -11.39433 -11.26923 -11.22623 -10.98886 -10.66704 -10.29323 -10.11408 -10.05693 -9.80632 -9.41474 -9.17954 -8.97940 -8.40097 -8.27830 -6.03036 -4.08194 0.61610 0.71739 1.53445 2.06013 2.70632 3.05487 3.13013 3.29249 3.35996 3.38056 3.48955 4.41443 4.64204 4.73705 4.81116 4.96007 5.01401 5.07235 5.22915 5.32333 5.34733 5.38426 5.69194 5.84318 5.96343 6.02791 6.08537 6.55673 6.70402 7.03812 7.41684 7.65126 7.73414 7.97107 8.24218 8.39703 8.99407 9.56078 11.07769 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.023553 B = 0.002752 C = 0.002508 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1188.509300 B =10170.339535 C =11162.867450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.317 6.317 3 C 0.086 3.914 4 C -0.023 4.023 5 Cl -0.041 7.041 6 C -0.101 4.101 7 C 0.181 3.819 8 N -0.683 5.683 9 C 0.510 3.490 10 O -0.507 6.507 11 C -0.127 4.127 12 C 0.036 3.964 13 C -0.530 4.530 14 H 0.057 0.943 15 C 0.059 3.941 16 N -0.888 5.888 17 Si 0.894 3.106 18 H -0.280 1.280 19 H -0.286 1.286 20 H -0.274 1.274 21 C -0.130 4.130 22 C -0.025 4.025 23 Cl -0.047 7.047 24 H 0.049 0.951 25 H 0.048 0.952 26 H 0.097 0.903 27 H 0.164 0.836 28 H 0.414 0.586 29 H 0.086 0.914 30 H 0.086 0.914 31 H 0.025 0.975 32 H 0.025 0.975 33 H 0.262 0.738 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -18.189 -11.469 -12.180 24.713 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.233 6.233 3 C 0.040 3.960 4 C -0.052 4.052 5 Cl -0.012 7.012 6 C -0.122 4.122 7 C 0.084 3.916 8 N -0.330 5.330 9 C 0.300 3.700 10 O -0.379 6.379 11 C -0.167 4.167 12 C -0.002 4.002 13 C -0.568 4.568 14 H 0.075 0.925 15 C -0.143 4.143 16 N -0.526 5.526 17 Si 0.721 3.279 18 H -0.206 1.206 19 H -0.212 1.212 20 H -0.199 1.199 21 C -0.151 4.151 22 C -0.053 4.053 23 Cl -0.018 7.018 24 H 0.068 0.932 25 H 0.067 0.933 26 H 0.116 0.884 27 H 0.181 0.819 28 H 0.251 0.749 29 H 0.105 0.895 30 H 0.104 0.896 31 H 0.044 0.956 32 H 0.044 0.956 33 H 0.072 0.928 34 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -17.840 -12.309 -11.321 24.453 hybrid contribution 0.267 1.180 -0.383 1.269 sum -17.573 -11.129 -11.705 23.868 Atomic orbital electron populations 1.23052 0.78589 1.03607 1.00867 1.86134 1.20115 1.23034 1.94049 1.17945 1.00749 0.87998 0.89349 1.20972 1.02687 0.94436 0.87067 1.98385 1.92363 1.80509 1.29980 1.21353 0.96840 0.93917 1.00097 1.17480 0.94170 0.87773 0.92176 1.44030 1.41869 1.14379 1.32677 1.22011 0.77851 0.90020 0.80105 1.90699 1.64149 1.50046 1.33027 1.21937 0.99098 0.91003 1.04675 1.18936 0.92953 0.97354 0.90921 1.21170 1.21845 1.03848 1.09962 0.92513 1.25021 0.96983 0.96913 0.95396 1.69989 1.34331 1.35598 1.12723 0.86578 0.79376 0.83735 0.78186 1.20631 1.21179 1.19861 1.20766 1.02280 0.93800 0.98282 1.20742 1.03541 0.94179 0.86853 1.98376 1.92573 1.80753 1.30089 0.93231 0.93334 0.88427 0.81850 0.74930 0.89534 0.89566 0.95645 0.95638 0.92840 0.83495 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.27 11.13 101.05 1.12 1.39 16 2 O -0.32 -3.68 9.32 -19.78 -0.18 -3.87 16 3 C 0.09 1.06 5.71 -39.18 -0.22 0.84 16 4 C -0.02 -0.31 6.33 -39.39 -0.25 -0.56 16 5 Cl -0.04 -0.53 28.49 -51.86 -1.48 -2.01 16 6 C -0.10 -1.44 8.47 -39.37 -0.33 -1.77 16 7 C 0.18 2.29 6.30 -83.63 -0.53 1.77 16 8 N -0.68 -8.42 5.34 -9.83 -0.05 -8.48 16 9 C 0.51 8.71 7.67 -10.98 -0.08 8.62 16 10 O -0.51 -10.73 13.42 5.55 0.07 -10.65 16 11 C -0.13 -2.31 5.64 -27.88 -0.16 -2.47 16 12 C 0.04 0.91 4.26 -27.88 -0.12 0.79 16 13 C -0.53 -14.40 9.11 -34.44 -0.31 -14.72 16 14 H 0.06 1.45 7.74 -52.49 -0.41 1.04 16 15 C 0.06 1.67 5.46 -17.82 -0.10 1.57 16 16 N -0.89 -26.69 13.29 55.43 0.74 -25.95 16 17 Si 0.89 21.10 29.54 -169.99 -5.02 16.08 16 18 H -0.28 -6.52 7.11 56.52 0.40 -6.12 16 19 H -0.29 -6.75 7.11 56.52 0.40 -6.35 16 20 H -0.27 -6.26 7.11 56.52 0.40 -5.86 16 21 C -0.13 -1.38 9.74 -39.37 -0.38 -1.76 16 22 C -0.03 -0.28 6.33 -39.39 -0.25 -0.53 16 23 Cl -0.05 -0.47 28.49 -51.86 -1.48 -1.94 16 24 H 0.05 0.39 8.14 -51.93 -0.42 -0.03 16 25 H 0.05 0.36 8.14 -51.93 -0.42 -0.06 16 26 H 0.10 0.60 8.14 -51.93 -0.42 0.17 16 27 H 0.16 2.65 6.22 -52.49 -0.33 2.33 16 28 H 0.41 3.50 8.82 -40.82 -0.36 3.14 16 29 H 0.09 1.41 8.14 -51.93 -0.42 0.99 16 30 H 0.09 1.38 8.14 -51.93 -0.42 0.96 16 31 H 0.03 0.70 8.10 -51.93 -0.42 0.28 16 32 H 0.03 0.71 8.10 -51.93 -0.42 0.29 16 33 H 0.26 7.41 8.31 -40.82 -0.34 7.07 16 34 H 0.15 1.18 8.06 -52.49 -0.42 0.76 16 LS Contribution 331.45 15.07 4.99 4.99 Total: -1.00 -32.41 331.45 -7.63 -40.04 By element: Atomic # 1 Polarization: 2.21 SS G_CDS: -3.61 Total: -1.39 kcal Atomic # 6 Polarization: -5.21 SS G_CDS: -1.61 Total: -6.83 kcal Atomic # 7 Polarization: -35.11 SS G_CDS: 0.68 Total: -34.43 kcal Atomic # 8 Polarization: -14.41 SS G_CDS: -0.11 Total: -14.52 kcal Atomic # 14 Polarization: 21.10 SS G_CDS: -5.02 Total: 16.08 kcal Atomic # 17 Polarization: -1.00 SS G_CDS: -2.96 Total: -3.95 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -32.41 -7.63 -40.04 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291771714.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -25.587 kcal (2) G-P(sol) polarization free energy of solvation -32.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.999 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.626 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.038 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds