Wall clock time and date at job start Tue Mar 31 2020 11:55:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.36012 * 116.99695 * 2 1 4 4 C 1.38788 * 119.99326 * 90.00718 * 3 2 1 5 5 Cl 1.73601 * 119.99525 * 359.97105 * 4 3 2 6 6 C 1.38209 * 120.00571 * 179.97438 * 4 3 2 7 7 C 1.38831 * 119.99134 * 359.97438 * 6 4 3 8 8 N 1.40111 * 120.00501 * 180.02562 * 7 6 4 9 9 C 1.34778 * 119.99898 * 35.08460 * 8 7 6 10 10 O 1.21291 * 120.00168 * 355.38627 * 9 8 7 11 11 C 1.50703 * 120.00057 * 175.10433 * 9 8 7 12 12 C 1.52996 * 109.47043 * 180.27980 * 11 9 8 13 13 C 1.50703 * 109.47043 * 179.97438 * 12 11 9 14 14 H 1.07999 * 119.99614 * 0.02562 * 13 12 11 15 15 C 1.37877 * 119.99902 * 180.02562 * 13 12 11 16 16 N 1.31513 * 119.99950 * 359.97438 * 15 13 12 17 17 Si 1.86802 * 119.99738 * 180.02562 * 15 13 12 18 18 H 1.48504 * 109.47034 * 89.99743 * 17 15 13 19 19 H 1.48501 * 109.47031 * 209.99571 * 17 15 13 20 20 H 1.48498 * 109.46971 * 329.99897 * 17 15 13 21 21 C 1.38841 * 119.99140 * 0.27392 * 7 6 4 22 22 C 1.38206 * 119.98862 * 359.47433 * 21 7 6 23 23 Cl 1.73601 * 119.99302 * 180.27812 * 22 21 7 24 24 H 1.09005 * 109.47345 * 300.00087 * 1 2 3 25 25 H 1.08996 * 109.47362 * 59.99816 * 1 2 3 26 26 H 1.09003 * 109.47618 * 179.97438 * 1 2 3 27 27 H 1.08000 * 119.99754 * 179.97438 * 6 4 3 28 28 H 0.97000 * 120.00278 * 215.09309 * 8 7 6 29 29 H 1.08996 * 109.46832 * 300.27885 * 11 9 8 30 30 H 1.08992 * 109.47023 * 60.27828 * 11 9 8 31 31 H 1.09002 * 109.47476 * 300.00030 * 12 11 9 32 32 H 1.09000 * 109.47189 * 60.00315 * 12 11 9 33 33 H 0.97004 * 119.99798 * 180.02562 * 16 15 13 34 34 H 1.07994 * 120.00031 * 179.72318 * 21 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2119 0.0000 4 6 2.3615 1.8300 1.2020 5 17 1.9668 1.0566 2.7053 6 6 2.9894 3.0613 1.2023 7 6 3.3053 3.6794 0.0001 8 7 3.9423 4.9274 0.0000 9 6 4.8460 5.2227 0.9554 10 8 5.0467 4.4427 1.8623 11 6 5.6117 6.5193 0.8933 12 6 6.5694 6.6033 2.0835 13 6 7.3356 7.8996 2.0211 14 1 7.1569 8.5941 1.2136 15 6 8.2647 8.1988 2.9949 16 7 8.4818 7.3532 3.9785 17 14 9.2138 9.8059 2.9179 18 1 8.4685 10.8568 3.6564 19 1 10.5514 9.6208 3.5359 20 1 9.3760 10.2175 1.5004 21 6 2.9854 3.0632 -1.2023 22 6 2.3622 1.8296 -1.2019 23 17 1.9686 1.0558 -2.7052 24 1 -0.3634 0.5139 0.8900 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 -0.0005 27 1 3.2341 3.5424 2.1378 28 1 3.7329 5.5788 -0.6875 29 1 6.1813 6.5607 -0.0350 30 1 4.9136 7.3555 0.9289 31 1 5.9999 6.5618 3.0119 32 1 7.2676 5.7670 2.0478 33 1 9.1352 7.5639 4.6638 34 1 3.2271 3.5460 -2.1376 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER ZINC000291771714.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:55:44 Heat of formation + Delta-G solvation = -86.286768 kcal Electronic energy + Delta-G solvation = -21007.235715 eV Core-core repulsion = 17377.351351 eV Total energy + Delta-G solvation = -3629.884364 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -41.85344 -40.61452 -38.55174 -37.87356 -37.48751 -35.58834 -35.44583 -33.06464 -31.91257 -30.49971 -28.14417 -27.28726 -24.67896 -24.22642 -22.93548 -21.35829 -19.40146 -18.91755 -18.75271 -17.99904 -17.29694 -16.81868 -16.53127 -16.48798 -16.12925 -15.45424 -15.21490 -15.09895 -14.76707 -14.58671 -14.20035 -14.13624 -13.48483 -13.28353 -13.17891 -12.82646 -12.81045 -12.53005 -12.46344 -12.20983 -12.19242 -11.90785 -11.64413 -11.30127 -11.13514 -11.11651 -10.82941 -10.54949 -9.94591 -9.29716 -8.16954 -6.30359 -0.34800 -0.24379 0.61062 1.10936 1.44023 1.45869 1.47730 1.56717 1.93921 2.13696 2.44361 2.58606 3.16993 3.69331 3.79473 3.83886 3.95362 4.11745 4.36098 4.41269 4.42459 4.51203 4.56215 4.75368 4.77155 4.87364 4.94312 5.09359 5.47130 5.53604 5.64615 5.86939 6.18046 6.19815 6.36131 6.88262 7.12093 7.40127 8.95474 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.023553 B = 0.002752 C = 0.002508 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1188.509300 B =10170.339535 C =11162.867450 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.331 6.331 3 C 0.091 3.909 4 C -0.037 4.037 5 Cl -0.046 7.046 6 C -0.116 4.116 7 C 0.166 3.834 8 N -0.657 5.657 9 C 0.515 3.485 10 O -0.558 6.558 11 C -0.115 4.115 12 C 0.039 3.961 13 C -0.541 4.541 14 H 0.079 0.921 15 C -0.007 4.007 16 N -0.938 5.938 17 Si 0.970 3.030 18 H -0.273 1.273 19 H -0.289 1.289 20 H -0.254 1.254 21 C -0.106 4.106 22 C -0.030 4.030 23 Cl -0.029 7.029 24 H 0.049 0.951 25 H 0.058 0.942 26 H 0.119 0.881 27 H 0.137 0.863 28 H 0.436 0.564 29 H 0.114 0.886 30 H 0.115 0.885 31 H -0.015 1.015 32 H -0.016 1.016 33 H 0.262 0.738 34 H 0.182 0.818 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.138 -10.469 -15.284 26.636 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.248 6.248 3 C 0.044 3.956 4 C -0.065 4.065 5 Cl -0.017 7.017 6 C -0.138 4.138 7 C 0.070 3.930 8 N -0.305 5.305 9 C 0.305 3.695 10 O -0.435 6.435 11 C -0.155 4.155 12 C 0.002 3.998 13 C -0.579 4.579 14 H 0.097 0.903 15 C -0.204 4.204 16 N -0.578 5.578 17 Si 0.795 3.205 18 H -0.198 1.198 19 H -0.215 1.215 20 H -0.178 1.178 21 C -0.127 4.127 22 C -0.058 4.058 23 Cl 0.000 7.000 24 H 0.068 0.932 25 H 0.077 0.923 26 H 0.137 0.863 27 H 0.154 0.846 28 H 0.277 0.723 29 H 0.132 0.868 30 H 0.133 0.867 31 H 0.004 0.996 32 H 0.002 0.998 33 H 0.070 0.930 34 H 0.199 0.801 Dipole moment (debyes) X Y Z Total from point charges -18.842 -11.294 -14.497 26.320 hybrid contribution 0.453 0.739 0.532 1.017 sum -18.389 -10.555 -13.966 25.389 Atomic orbital electron populations 1.23283 0.76685 1.05265 1.01366 1.86100 1.21917 1.22664 1.94094 1.18053 1.00238 0.87973 0.89336 1.21013 1.03510 0.94495 0.87489 1.98374 1.92415 1.80510 1.30411 1.21215 0.98002 0.94639 0.99904 1.17507 0.95082 0.87931 0.92458 1.43530 1.40257 1.14906 1.31806 1.21711 0.78354 0.89176 0.80261 1.90703 1.66019 1.51421 1.35328 1.21675 0.98693 0.92764 1.02322 1.18723 0.93168 0.95446 0.92507 1.21717 1.21443 1.04523 1.10175 0.90331 1.26103 0.98400 1.00916 0.95012 1.70172 1.35452 1.38223 1.13920 0.85368 0.77305 0.78740 0.79122 1.19826 1.21517 1.17787 1.20994 1.00060 0.93132 0.98543 1.20830 1.03350 0.94418 0.87231 1.98386 1.92408 1.80502 1.28700 0.93233 0.92328 0.86281 0.84559 0.72278 0.86801 0.86707 0.99648 0.99795 0.92954 0.80114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.40 11.13 113.37 1.26 1.66 16 2 O -0.33 -7.25 9.32 -93.69 -0.87 -8.12 16 3 C 0.09 2.13 5.71 22.53 0.13 2.26 16 4 C -0.04 -0.99 6.33 22.39 0.14 -0.85 16 5 Cl -0.05 -1.21 28.49 -2.72 -0.08 -1.29 16 6 C -0.12 -3.39 8.47 22.40 0.19 -3.20 16 7 C 0.17 4.01 6.30 38.10 0.24 4.25 16 8 N -0.66 -15.01 5.34 -303.40 -1.62 -16.63 16 9 C 0.51 17.51 7.67 87.66 0.67 18.18 16 10 O -0.56 -24.83 13.42 -3.06 -0.04 -24.87 16 11 C -0.12 -4.05 5.64 29.85 0.17 -3.88 16 12 C 0.04 2.05 4.26 29.85 0.13 2.18 16 13 C -0.54 -29.36 9.11 25.60 0.23 -29.13 16 14 H 0.08 3.83 7.74 -2.91 -0.02 3.81 16 15 C -0.01 -0.38 5.46 84.65 0.46 0.08 16 16 N -0.94 -58.35 13.29 21.45 0.28 -58.07 16 17 Si 0.97 43.17 29.54 68.60 2.03 45.20 16 18 H -0.27 -11.72 7.11 99.48 0.71 -11.01 16 19 H -0.29 -12.90 7.11 99.48 0.71 -12.19 16 20 H -0.25 -10.42 7.11 99.48 0.71 -9.71 16 21 C -0.11 -1.96 9.74 22.41 0.22 -1.74 16 22 C -0.03 -0.61 6.33 22.39 0.14 -0.47 16 23 Cl -0.03 -0.49 28.49 -2.72 -0.08 -0.57 16 24 H 0.05 0.73 8.14 -2.38 -0.02 0.71 16 25 H 0.06 0.74 8.14 -2.39 -0.02 0.72 16 26 H 0.12 1.20 8.14 -2.39 -0.02 1.18 16 27 H 0.14 4.76 6.22 -2.91 -0.02 4.74 16 28 H 0.44 5.86 8.82 -92.71 -0.82 5.04 16 29 H 0.11 3.41 8.14 -2.39 -0.02 3.39 16 30 H 0.11 3.39 8.14 -2.39 -0.02 3.37 16 31 H -0.01 -0.89 8.10 -2.39 -0.02 -0.91 16 32 H -0.02 -0.98 8.10 -2.39 -0.02 -1.00 16 33 H 0.26 15.34 8.31 -92.71 -0.77 14.57 16 34 H 0.18 2.06 8.06 -2.91 -0.02 2.04 16 Total: -1.00 -74.22 331.45 3.94 -70.28 By element: Atomic # 1 Polarization: 4.40 SS G_CDS: 0.33 Total: 4.73 kcal Atomic # 6 Polarization: -14.64 SS G_CDS: 3.99 Total: -10.65 kcal Atomic # 7 Polarization: -73.36 SS G_CDS: -1.34 Total: -74.70 kcal Atomic # 8 Polarization: -32.07 SS G_CDS: -0.91 Total: -32.99 kcal Atomic # 14 Polarization: 43.17 SS G_CDS: 2.03 Total: 45.20 kcal Atomic # 17 Polarization: -1.71 SS G_CDS: -0.16 Total: -1.86 kcal Total: -74.22 3.94 -70.28 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000291771714.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.010 kcal (2) G-P(sol) polarization free energy of solvation -74.216 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.226 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -70.277 kcal (6) G-S(sol) free energy of system = (1) + (5) -86.287 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds