Wall clock time and date at job start Tue Mar 31 2020 11:48:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 N 1.46499 * 109.47019 * 2 1 4 4 C 1.37097 * 120.00040 * 263.65416 * 3 2 1 5 5 H 1.08002 * 119.99860 * 193.09519 * 4 3 2 6 6 C 1.38945 * 120.00158 * 13.09829 * 4 3 2 7 7 N 1.31416 * 120.00214 * 16.89330 * 6 4 3 8 8 Si 1.86800 * 120.00204 * 196.89939 * 6 4 3 9 9 H 1.48501 * 109.47025 * 59.99298 * 8 6 4 10 10 H 1.48493 * 109.47313 * 179.97438 * 8 6 4 11 11 H 1.48502 * 109.46665 * 299.99920 * 8 6 4 12 12 C 1.34776 * 119.99852 * 83.65107 * 3 2 1 13 13 O 1.21292 * 119.99981 * 174.97355 * 12 3 2 14 14 C 1.50700 * 120.00226 * 355.25353 * 12 3 2 15 15 H 1.08997 * 109.46892 * 322.61695 * 14 12 3 16 16 O 1.42895 * 109.47334 * 202.61535 * 14 12 3 17 17 C 1.50705 * 109.47277 * 82.61360 * 14 12 3 18 18 C 1.38272 * 119.97933 * 67.76984 * 17 14 12 19 19 C 1.38198 * 120.03244 * 179.72930 * 18 17 14 20 20 C 1.38345 * 120.00778 * 0.54548 * 19 18 17 21 21 Cl 1.73595 * 120.02416 * 179.75157 * 20 19 18 22 22 C 1.38449 * 119.95541 * 359.73010 * 20 19 18 23 23 Cl 1.73600 * 120.01678 * 180.02562 * 22 20 19 24 24 C 1.38204 * 119.97884 * 248.04859 * 17 14 12 25 25 H 1.08993 * 109.47339 * 59.99734 * 1 2 3 26 26 H 1.08996 * 109.47113 * 179.97438 * 1 2 3 27 27 H 1.09002 * 109.46893 * 299.99830 * 1 2 3 28 28 H 1.09002 * 109.46893 * 240.00170 * 2 1 3 29 29 H 1.08994 * 109.46858 * 120.00476 * 2 1 3 30 30 H 0.96995 * 120.00248 * 180.02562 * 7 6 4 31 31 H 0.96703 * 114.00155 * 299.99944 * 16 14 12 32 32 H 1.07997 * 119.97352 * 359.97438 * 18 17 14 33 33 H 1.08003 * 119.99616 * 180.25416 * 19 18 17 34 34 H 1.07992 * 120.00685 * 0.02562 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 7 2.0184 1.3812 0.0000 4 6 2.3706 1.9838 -1.1800 5 1 2.9234 2.9115 -1.1686 6 6 2.0163 1.4010 -2.3906 7 7 1.0813 0.4782 -2.4269 8 14 2.8692 1.9289 -3.9664 9 1 4.3260 1.6641 -3.8534 10 1 2.3144 1.1618 -5.1104 11 1 2.6456 3.3802 -4.1879 12 6 2.1213 2.0596 1.1601 13 8 2.6104 3.1694 1.1723 14 6 1.6344 1.4366 2.4430 15 1 0.7277 0.8642 2.2476 16 8 1.3530 2.4645 3.3949 17 6 2.6980 0.5210 2.9921 18 6 3.8851 1.0474 3.4670 19 6 4.8589 0.2093 3.9760 20 6 4.6510 -1.1583 4.0003 21 17 5.8766 -2.2120 4.6336 22 6 3.4647 -1.6858 3.5195 23 17 3.2019 -3.4016 3.5498 24 6 2.4885 -0.8449 3.0155 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8900 28 1 1.8934 -0.5138 -0.8900 29 1 1.8933 -0.5139 0.8899 30 1 0.8343 0.0711 -3.2719 31 1 2.1165 3.0149 3.6168 32 1 4.0496 2.1146 3.4437 33 1 5.7842 0.6215 4.3506 34 1 1.5632 -1.2559 2.6399 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000294624117.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:12 Heat of formation + Delta-G solvation = -58.200862 kcal Electronic energy + Delta-G solvation = -22531.201478 eV Core-core repulsion = 18902.535010 eV Total energy + Delta-G solvation = -3628.666467 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.18028 -38.54004 -36.75849 -36.58165 -36.02188 -34.93109 -32.23289 -31.23017 -30.80090 -29.55191 -26.99535 -24.61441 -23.12112 -22.45638 -21.72026 -19.49496 -17.82951 -17.21526 -16.74232 -16.23052 -15.91113 -15.32282 -14.72001 -14.45766 -14.15887 -13.95056 -13.62358 -13.38891 -13.15960 -12.86882 -12.61821 -12.03374 -11.94480 -11.82225 -11.68141 -11.34958 -11.31836 -11.14335 -11.07365 -10.96115 -10.78111 -10.44441 -10.37124 -10.22490 -10.00956 -9.07293 -9.01280 -8.82833 -8.24916 -7.84528 -6.41396 -3.94126 0.87141 1.04266 1.76874 2.13210 3.09247 3.19019 3.22377 3.34549 3.64356 4.00834 4.48916 4.57561 4.77005 4.83890 5.03786 5.05516 5.14411 5.23500 5.51599 5.58151 5.73255 5.85580 5.99839 6.05724 6.35540 6.45040 6.52076 6.52259 6.67294 7.19260 7.37899 7.66254 7.78928 7.96596 8.36858 9.03406 9.28374 9.78990 10.55010 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.014969 B = 0.004551 C = 0.004268 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1870.047837 B = 6150.515390 C = 6558.813717 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C 0.111 3.889 3 N -0.425 5.425 4 C -0.304 4.304 5 H 0.104 0.896 6 C 0.030 3.970 7 N -0.869 5.869 8 Si 0.927 3.073 9 H -0.274 1.274 10 H -0.283 1.283 11 H -0.273 1.273 12 C 0.415 3.585 13 O -0.588 6.588 14 C 0.133 3.867 15 H 0.124 0.876 16 O -0.536 6.536 17 C -0.083 4.083 18 C -0.086 4.086 19 C -0.096 4.096 20 C -0.033 4.033 21 Cl -0.057 7.057 22 C -0.029 4.029 23 Cl -0.053 7.053 24 C -0.085 4.085 25 H 0.097 0.903 26 H 0.041 0.959 27 H 0.024 0.976 28 H 0.107 0.893 29 H 0.035 0.965 30 H 0.269 0.731 31 H 0.378 0.622 32 H 0.142 0.858 33 H 0.143 0.857 34 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.838 -6.917 10.893 13.463 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.211 4.211 2 C -0.012 4.012 3 N -0.143 5.143 4 C -0.432 4.432 5 H 0.121 0.879 6 C -0.173 4.173 7 N -0.509 5.509 8 Si 0.754 3.246 9 H -0.199 1.199 10 H -0.208 1.208 11 H -0.198 1.198 12 C 0.203 3.797 13 O -0.474 6.474 14 C 0.070 3.930 15 H 0.142 0.858 16 O -0.341 6.341 17 C -0.085 4.085 18 C -0.105 4.105 19 C -0.115 4.115 20 C -0.061 4.061 21 Cl -0.028 7.028 22 C -0.056 4.056 23 Cl -0.024 7.024 24 C -0.104 4.104 25 H 0.116 0.884 26 H 0.060 0.940 27 H 0.043 0.957 28 H 0.125 0.875 29 H 0.053 0.947 30 H 0.080 0.920 31 H 0.227 0.773 32 H 0.160 0.840 33 H 0.161 0.839 34 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 3.469 -7.018 10.746 13.295 hybrid contribution 0.918 -0.050 -0.834 1.242 sum 4.387 -7.069 9.912 12.940 Atomic orbital electron populations 1.22238 0.96460 1.00191 1.02252 1.21701 0.94707 0.83483 1.01333 1.43816 1.54068 1.10992 1.05439 1.19746 1.32911 1.08606 0.81903 0.87859 1.25279 0.95687 0.96890 0.99454 1.70038 1.26385 1.27389 1.27062 0.85977 0.79598 0.78867 0.80206 1.19919 1.20838 1.19774 1.20362 0.87059 0.86957 0.85362 1.90514 1.50080 1.20803 1.85999 1.20895 0.96756 0.87277 0.88049 0.85825 1.86559 1.40051 1.46613 1.60893 1.20570 0.96561 0.93945 0.97386 1.21091 0.92065 1.00991 0.96328 1.20974 1.00350 0.90221 0.99982 1.20734 0.90451 0.91768 1.03130 1.98371 1.53425 1.65897 1.85112 1.20667 0.94969 0.86018 1.03970 1.98379 1.96422 1.10456 1.97115 1.20951 0.99003 0.92041 0.98418 0.88409 0.94034 0.95750 0.87469 0.94675 0.92029 0.77267 0.84042 0.83945 0.83497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.02 9.45 37.16 0.35 -2.67 16 2 C 0.11 2.34 4.95 -4.04 -0.02 2.32 16 3 N -0.43 -10.26 2.64 -114.81 -0.30 -10.57 16 4 C -0.30 -8.05 9.45 -14.93 -0.14 -8.19 16 5 H 0.10 2.89 7.28 -52.49 -0.38 2.51 16 6 C 0.03 0.74 5.05 -17.47 -0.09 0.65 16 7 N -0.87 -21.16 8.22 55.50 0.46 -20.71 16 8 Si 0.93 19.84 29.59 -169.99 -5.03 14.81 16 9 H -0.27 -5.88 7.11 56.52 0.40 -5.47 16 10 H -0.28 -5.92 7.11 56.52 0.40 -5.52 16 11 H -0.27 -5.90 7.11 56.52 0.40 -5.50 16 12 C 0.42 9.57 6.61 -10.99 -0.07 9.49 16 13 O -0.59 -15.26 15.97 -13.23 -0.21 -15.48 16 14 C 0.13 2.42 2.87 -29.03 -0.08 2.33 16 15 H 0.12 2.17 5.04 -51.93 -0.26 1.91 16 16 O -0.54 -9.42 13.10 -54.01 -0.71 -10.13 16 17 C -0.08 -1.30 4.55 -104.62 -0.48 -1.78 16 18 C -0.09 -1.23 9.09 -39.58 -0.36 -1.59 16 19 C -0.10 -1.22 9.83 -39.56 -0.39 -1.61 16 20 C -0.03 -0.44 6.32 -39.46 -0.25 -0.69 16 21 Cl -0.06 -0.68 27.96 -51.86 -1.45 -2.13 16 22 C -0.03 -0.40 6.32 -39.46 -0.25 -0.65 16 23 Cl -0.05 -0.67 27.96 -51.86 -1.45 -2.12 16 24 C -0.09 -1.23 7.69 -39.55 -0.30 -1.53 16 25 H 0.10 2.23 6.21 -51.93 -0.32 1.91 16 26 H 0.04 0.71 8.14 -51.93 -0.42 0.28 16 27 H 0.02 0.44 6.17 -51.93 -0.32 0.12 16 28 H 0.11 2.48 5.90 -51.93 -0.31 2.17 16 29 H 0.04 0.64 3.94 -51.93 -0.20 0.44 16 30 H 0.27 6.27 8.31 -40.82 -0.34 5.93 16 31 H 0.38 5.75 7.55 45.56 0.34 6.09 16 32 H 0.14 1.92 7.35 -52.49 -0.39 1.53 16 33 H 0.14 1.45 8.06 -52.48 -0.42 1.02 16 34 H 0.15 1.94 7.24 -52.49 -0.38 1.56 16 LS Contribution 310.12 15.07 4.67 4.67 Total: -1.00 -28.27 310.12 -8.30 -36.57 By element: Atomic # 1 Polarization: 11.19 SS G_CDS: -2.20 Total: 9.00 kcal Atomic # 6 Polarization: -1.84 SS G_CDS: -2.08 Total: -3.92 kcal Atomic # 7 Polarization: -31.43 SS G_CDS: 0.15 Total: -31.27 kcal Atomic # 8 Polarization: -24.68 SS G_CDS: -0.92 Total: -25.60 kcal Atomic # 14 Polarization: 19.84 SS G_CDS: -5.03 Total: 14.81 kcal Atomic # 17 Polarization: -1.35 SS G_CDS: -2.90 Total: -4.25 kcal Total LS contribution 4.67 Total: 4.67 kcal Total: -28.27 -8.30 -36.57 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000294624117.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.631 kcal (2) G-P(sol) polarization free energy of solvation -28.267 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.898 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.303 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.570 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.54 seconds