Wall clock time and date at job start Tue Mar 31 2020 11:48:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 N 1.46500 * 109.47200 * 2 1 4 4 C 1.37094 * 119.99735 * 263.43983 * 3 2 1 5 5 H 1.07994 * 120.00112 * 191.71447 * 4 3 2 6 6 C 1.38954 * 120.00252 * 11.71849 * 4 3 2 7 7 N 1.31411 * 119.99801 * 16.12451 * 6 4 3 8 8 Si 1.86799 * 120.00281 * 196.12440 * 6 4 3 9 9 H 1.48498 * 109.47006 * 59.99663 * 8 6 4 10 10 H 1.48504 * 109.47231 * 179.97438 * 8 6 4 11 11 H 1.48504 * 109.46839 * 299.99958 * 8 6 4 12 12 C 1.34774 * 119.99913 * 83.43638 * 3 2 1 13 13 O 1.21286 * 120.00378 * 4.27179 * 12 3 2 14 14 C 1.50706 * 119.99663 * 184.26928 * 12 3 2 15 15 H 1.09000 * 109.47179 * 37.28841 * 14 12 3 16 16 O 1.42900 * 109.47089 * 157.28836 * 14 12 3 17 17 C 1.50694 * 109.47400 * 277.29043 * 14 12 3 18 18 C 1.38272 * 119.97835 * 288.77406 * 17 14 12 19 19 C 1.38208 * 120.03761 * 180.02562 * 18 17 14 20 20 C 1.38343 * 120.00041 * 359.97438 * 19 18 17 21 21 Cl 1.73595 * 120.02164 * 180.02562 * 20 19 18 22 22 C 1.38451 * 119.96312 * 0.02562 * 20 19 18 23 23 Cl 1.73598 * 120.02054 * 180.02562 * 22 20 19 24 24 C 1.38203 * 119.98364 * 108.76586 * 17 14 12 25 25 H 1.09001 * 109.47552 * 302.61523 * 1 2 3 26 26 H 1.09003 * 109.47311 * 62.61476 * 1 2 3 27 27 H 1.09002 * 109.47653 * 182.60976 * 1 2 3 28 28 H 1.08993 * 109.47050 * 239.99045 * 2 1 3 29 29 H 1.08999 * 109.46452 * 119.99342 * 2 1 3 30 30 H 0.97002 * 120.00226 * 180.02562 * 7 6 4 31 31 H 0.96695 * 114.00049 * 60.00002 * 16 14 12 32 32 H 1.08001 * 119.98124 * 0.02562 * 18 17 14 33 33 H 1.08002 * 119.99712 * 180.27023 * 19 18 17 34 34 H 1.07996 * 120.00142 * 359.97438 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 2.3747 1.9822 -1.1795 5 1 2.9080 2.9212 -1.1676 6 6 2.0497 1.3832 -2.3905 7 7 1.1454 0.4306 -2.4305 8 14 2.8982 1.9321 -3.9615 9 1 4.3618 1.7153 -3.8354 10 1 2.3781 1.1427 -5.1068 11 1 2.6295 3.3745 -4.1912 12 6 2.1172 2.0610 1.1595 13 8 1.8761 1.5057 2.2105 14 6 2.5273 3.5111 1.1502 15 1 2.0880 4.0074 0.2848 16 8 2.0678 4.1438 2.3462 17 6 4.0293 3.6080 1.0758 18 6 4.7991 3.2590 2.1701 19 6 6.1768 3.3478 2.1034 20 6 6.7863 3.7856 0.9412 21 17 8.5166 3.8968 0.8567 22 6 6.0154 4.1350 -0.1545 23 17 6.7787 4.6839 -1.6139 24 6 4.6365 4.0453 -0.0861 25 1 -0.3634 0.5539 0.8656 26 1 -0.3634 0.4727 -0.9125 27 1 -0.3634 -1.0266 0.0468 28 1 1.8933 -0.5139 -0.8898 29 1 1.8932 -0.5137 0.8901 30 1 0.9187 0.0122 -3.2758 31 1 2.4194 3.7531 3.1579 32 1 4.3237 2.9168 3.0774 33 1 6.7776 3.0709 2.9571 34 1 4.0347 4.3172 -0.9406 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000294624122.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:48:15 Heat of formation + Delta-G solvation = -61.258826 kcal Electronic energy + Delta-G solvation = -22600.440577 eV Core-core repulsion = 18971.641506 eV Total energy + Delta-G solvation = -3628.799071 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -40.02584 -38.50668 -36.71443 -36.46736 -35.94297 -34.84085 -31.83534 -31.49614 -30.69721 -29.77854 -26.44045 -24.92211 -22.96130 -22.50756 -21.29367 -19.37190 -17.97139 -17.52290 -16.60559 -16.11059 -15.65351 -15.07535 -14.60625 -14.45720 -14.12730 -13.98778 -13.74026 -13.27198 -13.01909 -12.54781 -12.40434 -12.00796 -11.84186 -11.73837 -11.66644 -11.31666 -11.20076 -11.11954 -11.05306 -10.88102 -10.76844 -10.60274 -10.36039 -10.22725 -9.84608 -9.04385 -8.95120 -8.72909 -8.18085 -7.92006 -6.50183 -4.07348 0.99997 1.18851 1.88120 2.25086 3.00432 3.11366 3.13770 3.44995 3.67413 3.93037 4.46942 4.68104 4.80772 4.92563 5.03416 5.16280 5.28784 5.36068 5.70339 5.90229 5.92715 6.01920 6.10828 6.46849 6.53285 6.64829 6.68282 6.77969 6.95497 7.14158 7.33895 7.61280 7.68510 7.90293 8.26151 8.87925 9.32205 9.72169 10.44138 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.012828 B = 0.006026 C = 0.004570 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2182.160039 B = 4645.451400 C = 6125.890777 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.130 3.870 3 N -0.422 5.422 4 C -0.342 4.342 5 H 0.101 0.899 6 C 0.041 3.959 7 N -0.853 5.853 8 Si 0.912 3.088 9 H -0.268 1.268 10 H -0.280 1.280 11 H -0.269 1.269 12 C 0.424 3.576 13 O -0.606 6.606 14 C 0.143 3.857 15 H 0.128 0.872 16 O -0.539 6.539 17 C -0.075 4.075 18 C -0.090 4.090 19 C -0.099 4.099 20 C -0.034 4.034 21 Cl -0.060 7.060 22 C -0.028 4.028 23 Cl -0.055 7.055 24 C -0.076 4.076 25 H 0.026 0.974 26 H 0.085 0.915 27 H 0.034 0.966 28 H 0.104 0.896 29 H 0.035 0.965 30 H 0.271 0.729 31 H 0.376 0.624 32 H 0.139 0.861 33 H 0.141 0.859 34 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.958 5.668 2.795 10.963 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 C 0.007 3.993 3 N -0.139 5.139 4 C -0.469 4.469 5 H 0.118 0.882 6 C -0.165 4.165 7 N -0.490 5.490 8 Si 0.737 3.263 9 H -0.193 1.193 10 H -0.205 1.205 11 H -0.194 1.194 12 C 0.211 3.789 13 O -0.494 6.494 14 C 0.080 3.920 15 H 0.146 0.854 16 O -0.344 6.344 17 C -0.077 4.077 18 C -0.109 4.109 19 C -0.118 4.118 20 C -0.062 4.062 21 Cl -0.031 7.031 22 C -0.056 4.056 23 Cl -0.026 7.026 24 C -0.095 4.095 25 H 0.045 0.955 26 H 0.104 0.896 27 H 0.053 0.947 28 H 0.122 0.878 29 H 0.053 0.947 30 H 0.082 0.918 31 H 0.224 0.776 32 H 0.157 0.843 33 H 0.159 0.841 34 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 8.635 5.666 2.547 10.637 hybrid contribution 0.905 -0.193 -0.812 1.231 sum 9.540 5.472 1.736 11.134 Atomic orbital electron populations 1.21978 0.96693 0.99331 1.01835 1.21351 0.94479 0.82777 1.00643 1.43845 1.53307 1.11407 1.05306 1.19791 1.35927 1.08268 0.82925 0.88155 1.25240 0.95261 0.96566 0.99429 1.70079 1.26970 1.24888 1.27095 0.86210 0.80196 0.79181 0.80711 1.19264 1.20547 1.19379 1.20398 0.85397 0.88360 0.84740 1.90530 1.58245 1.69454 1.31166 1.20630 0.88003 0.93718 0.89611 0.85429 1.86574 1.73605 1.58731 1.15506 1.20461 0.96979 0.96818 0.93411 1.21028 0.92717 0.97905 0.99209 1.20914 0.94755 0.99813 0.96341 1.20704 0.84900 1.05418 0.95150 1.98363 1.09537 1.96745 1.98497 1.20675 0.92811 1.03966 0.88124 1.98373 1.81477 1.87940 1.34854 1.20995 0.91587 0.98219 0.98653 0.95461 0.89625 0.94717 0.87820 0.94692 0.91783 0.77563 0.84338 0.84147 0.83382 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.17 9.71 37.16 0.36 -2.81 16 2 C 0.13 3.09 5.27 -4.04 -0.02 3.06 16 3 N -0.42 -10.05 2.64 -114.82 -0.30 -10.35 16 4 C -0.34 -7.94 8.94 -14.93 -0.13 -8.08 16 5 H 0.10 2.13 3.42 -52.49 -0.18 1.96 16 6 C 0.04 0.95 5.09 -17.47 -0.09 0.86 16 7 N -0.85 -20.34 8.20 55.50 0.46 -19.88 16 8 Si 0.91 18.28 29.58 -169.99 -5.03 13.25 16 9 H -0.27 -5.42 7.11 56.52 0.40 -5.02 16 10 H -0.28 -5.67 7.11 56.52 0.40 -5.26 16 11 H -0.27 -5.26 7.11 56.52 0.40 -4.86 16 12 C 0.42 9.67 6.69 -10.98 -0.07 9.60 16 13 O -0.61 -15.07 16.01 -13.25 -0.21 -15.28 16 14 C 0.14 2.70 2.88 -29.04 -0.08 2.62 16 15 H 0.13 2.43 6.77 -51.93 -0.35 2.07 16 16 O -0.54 -9.69 13.07 -54.03 -0.71 -10.39 16 17 C -0.08 -1.26 4.73 -104.63 -0.49 -1.75 16 18 C -0.09 -1.34 9.16 -39.58 -0.36 -1.70 16 19 C -0.10 -1.33 9.83 -39.55 -0.39 -1.72 16 20 C -0.03 -0.49 6.32 -39.46 -0.25 -0.74 16 21 Cl -0.06 -0.77 27.96 -51.86 -1.45 -2.22 16 22 C -0.03 -0.43 6.32 -39.46 -0.25 -0.68 16 23 Cl -0.06 -0.80 27.96 -51.86 -1.45 -2.25 16 24 C -0.08 -1.23 8.30 -39.55 -0.33 -1.55 16 25 H 0.03 0.62 8.14 -51.93 -0.42 0.20 16 26 H 0.09 2.06 6.31 -51.93 -0.33 1.73 16 27 H 0.03 0.70 8.14 -51.93 -0.42 0.27 16 28 H 0.10 2.54 5.74 -51.93 -0.30 2.24 16 29 H 0.03 0.83 7.57 -51.93 -0.39 0.44 16 30 H 0.27 6.19 8.31 -40.82 -0.34 5.85 16 31 H 0.38 5.80 7.40 45.56 0.34 6.14 16 32 H 0.14 1.89 7.18 -52.49 -0.38 1.51 16 33 H 0.14 1.50 8.06 -52.49 -0.42 1.08 16 34 H 0.15 2.33 6.61 -52.49 -0.35 1.98 16 LS Contribution 313.64 15.07 4.73 4.73 Total: -1.00 -26.55 313.64 -8.42 -34.97 By element: Atomic # 1 Polarization: 12.67 SS G_CDS: -2.34 Total: 10.33 kcal Atomic # 6 Polarization: -0.79 SS G_CDS: -2.11 Total: -2.90 kcal Atomic # 7 Polarization: -30.39 SS G_CDS: 0.15 Total: -30.23 kcal Atomic # 8 Polarization: -24.75 SS G_CDS: -0.92 Total: -25.67 kcal Atomic # 14 Polarization: 18.28 SS G_CDS: -5.03 Total: 13.25 kcal Atomic # 17 Polarization: -1.58 SS G_CDS: -2.90 Total: -4.48 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -26.55 -8.42 -34.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000294624122.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.287 kcal (2) G-P(sol) polarization free energy of solvation -26.550 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.422 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.972 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.259 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds