Wall clock time and date at job start Tue Mar 31 2020 11:54:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.46502 * 119.99430 * 2 1 4 4 C 1.50702 * 109.46970 * 270.00073 * 3 2 1 5 5 H 1.08001 * 119.99968 * 359.97438 * 4 3 2 6 6 C 1.37879 * 119.99950 * 180.02562 * 4 3 2 7 7 N 1.31514 * 119.99651 * 359.97438 * 6 4 3 8 8 Si 1.86798 * 120.00197 * 179.97438 * 6 4 3 9 9 H 1.48499 * 109.46960 * 89.99838 * 8 6 4 10 10 H 1.48491 * 109.47366 * 209.99994 * 8 6 4 11 11 H 1.48505 * 109.47015 * 330.00261 * 8 6 4 12 12 C 1.34771 * 120.00422 * 180.02562 * 2 1 3 13 13 O 1.21274 * 120.00294 * 175.26391 * 12 2 1 14 14 C 1.50707 * 119.99653 * 355.54056 * 12 2 1 15 15 H 1.08992 * 109.47247 * 321.92027 * 14 12 2 16 16 O 1.42898 * 109.46995 * 201.91724 * 14 12 2 17 17 C 1.50699 * 109.47193 * 81.92132 * 14 12 2 18 18 C 1.38266 * 119.98151 * 70.92898 * 17 14 12 19 19 C 1.38206 * 120.03919 * 179.73171 * 18 17 14 20 20 C 1.38347 * 119.99957 * 0.54341 * 19 18 17 21 21 Cl 1.73598 * 120.02351 * 179.75434 * 20 19 18 22 22 C 1.38446 * 119.95815 * 359.72768 * 20 19 18 23 23 Cl 1.73601 * 120.01623 * 180.02562 * 22 20 19 24 24 C 1.38203 * 119.98510 * 251.20543 * 17 14 12 25 25 H 1.09008 * 109.46840 * 264.79809 * 1 2 3 26 26 H 1.08998 * 109.47714 * 24.80035 * 1 2 3 27 27 H 1.09002 * 109.46908 * 144.80323 * 1 2 3 28 28 H 1.08994 * 109.47403 * 29.99953 * 3 2 1 29 29 H 1.09000 * 109.46658 * 150.00805 * 3 2 1 30 30 H 0.97003 * 119.99503 * 179.97438 * 7 6 4 31 31 H 0.96697 * 114.00093 * 300.00389 * 16 14 12 32 32 H 1.08006 * 119.98310 * 359.97438 * 18 17 14 33 33 H 1.08003 * 120.00394 * 180.24950 * 19 18 17 34 34 H 1.08009 * 119.99444 * 0.02562 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1974 1.2688 0.0000 4 6 2.4485 1.7039 -1.4208 5 1 2.0980 1.0958 -2.2417 6 6 3.1266 2.8776 -1.6728 7 7 3.5539 3.6177 -0.6732 8 14 3.4385 3.4166 -3.4340 9 1 2.3088 4.2597 -3.9010 10 1 4.6990 4.1991 -3.4963 11 1 3.5556 2.2192 -4.3047 12 6 2.1390 -1.1671 -0.0005 13 8 3.3486 -1.1688 -0.0872 14 6 1.3889 -2.4703 0.1004 15 1 0.5513 -2.3551 0.7882 16 8 2.2665 -3.4887 0.5848 17 6 0.8715 -2.8588 -1.2606 18 6 1.7517 -3.2810 -2.2398 19 6 1.2779 -3.6428 -3.4867 20 6 -0.0766 -3.5721 -3.7592 21 17 -0.6717 -4.0204 -5.3272 22 6 -0.9573 -3.1440 -2.7805 23 17 -2.6574 -3.0553 -3.1207 24 6 -0.4819 -2.7875 -1.5313 25 1 -0.3633 -0.0932 1.0235 26 1 -0.3634 0.9328 -0.4310 27 1 -0.3633 -0.8398 -0.5923 28 1 1.6083 2.0284 0.5138 29 1 3.1499 1.1385 0.5137 30 1 4.0313 4.4433 -0.8505 31 1 3.0363 -3.6454 0.0209 32 1 2.8098 -3.3317 -2.0290 33 1 1.9655 -3.9763 -4.2498 34 1 -1.1684 -2.4530 -0.7674 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000294680641.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:54:55 Heat of formation + Delta-G solvation = -69.297800 kcal Electronic energy + Delta-G solvation = -22087.670485 eV Core-core repulsion = 18458.522818 eV Total energy + Delta-G solvation = -3629.147667 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -40.49014 -38.85297 -36.93712 -36.73382 -36.15285 -34.92407 -32.77787 -31.74203 -31.02551 -28.31579 -26.95276 -25.58346 -23.28726 -23.08571 -21.86483 -19.16538 -18.08808 -17.19479 -16.63546 -16.53141 -16.17198 -15.60112 -15.15459 -14.67369 -14.50761 -14.17508 -13.95750 -13.72377 -13.32797 -12.84116 -12.58403 -12.26001 -12.10378 -12.09335 -12.00743 -11.77284 -11.47002 -11.31875 -11.27903 -11.09615 -10.95024 -10.77332 -10.61363 -10.21501 -9.71305 -9.34272 -9.07770 -8.63688 -8.48851 -7.79376 -6.09884 -4.14709 0.65944 0.83880 1.61322 1.97155 3.00513 3.22458 3.26797 3.33635 3.37796 3.70527 4.32907 4.36192 4.41625 4.47441 4.79590 4.80981 4.96805 4.99331 5.25099 5.25878 5.42247 5.52326 5.62916 5.76965 5.79841 6.07440 6.10111 6.29374 6.90639 7.31542 7.39727 7.45225 7.85455 8.15522 8.22330 8.74323 8.91926 9.50414 10.98335 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.012305 B = 0.004656 C = 0.004048 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2274.924166 B = 6011.952726 C = 6914.870433 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.591 5.591 3 C 0.244 3.756 4 C -0.526 4.526 5 H 0.057 0.943 6 C 0.062 3.938 7 N -0.894 5.894 8 Si 0.897 3.103 9 H -0.280 1.280 10 H -0.284 1.284 11 H -0.274 1.274 12 C 0.482 3.518 13 O -0.530 6.530 14 C 0.132 3.868 15 H 0.127 0.873 16 O -0.533 6.533 17 C -0.091 4.091 18 C -0.083 4.083 19 C -0.093 4.093 20 C -0.028 4.028 21 Cl -0.051 7.051 22 C -0.029 4.029 23 Cl -0.049 7.049 24 C -0.086 4.086 25 H 0.049 0.951 26 H 0.081 0.919 27 H 0.059 0.941 28 H 0.035 0.965 29 H 0.044 0.956 30 H 0.264 0.736 31 H 0.384 0.616 32 H 0.143 0.857 33 H 0.146 0.854 34 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.779 -15.636 -3.301 19.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.323 5.323 3 C 0.125 3.875 4 C -0.565 4.565 5 H 0.075 0.925 6 C -0.140 4.140 7 N -0.533 5.533 8 Si 0.724 3.276 9 H -0.206 1.206 10 H -0.210 1.210 11 H -0.199 1.199 12 C 0.267 3.733 13 O -0.408 6.408 14 C 0.068 3.932 15 H 0.144 0.856 16 O -0.339 6.339 17 C -0.092 4.092 18 C -0.101 4.101 19 C -0.111 4.111 20 C -0.056 4.056 21 Cl -0.022 7.022 22 C -0.056 4.056 23 Cl -0.020 7.020 24 C -0.105 4.105 25 H 0.067 0.933 26 H 0.100 0.900 27 H 0.077 0.923 28 H 0.053 0.947 29 H 0.062 0.938 30 H 0.074 0.926 31 H 0.234 0.766 32 H 0.160 0.840 33 H 0.163 0.837 34 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -10.677 -15.500 -2.991 19.057 hybrid contribution 0.262 0.581 -1.669 1.786 sum -10.415 -14.919 -4.660 18.782 Atomic orbital electron populations 1.21954 0.81404 1.03654 1.00512 1.48162 1.06244 1.07748 1.70189 1.19366 0.92515 0.77844 0.97727 1.21378 1.36661 1.06313 0.92108 0.92486 1.24921 0.95294 0.96359 0.97417 1.69928 1.38283 1.14343 1.30734 0.86515 0.77755 0.78654 0.84647 1.20584 1.21016 1.19884 1.20814 0.88502 0.85540 0.78436 1.90691 1.13747 1.86604 1.49718 1.20808 0.93244 0.87152 0.91950 0.85559 1.86586 1.38853 1.55202 1.53217 1.20318 0.93210 0.99030 0.96689 1.21076 1.00706 0.96440 0.91881 1.21018 0.92699 0.99677 0.97749 1.20794 0.93596 1.03663 0.87522 1.98387 1.88340 1.90843 1.24666 1.20651 0.85857 1.04467 0.94649 1.98390 1.11598 1.96742 1.95247 1.20879 0.95209 0.99198 0.95214 0.93264 0.90036 0.92264 0.94730 0.93821 0.92650 0.76642 0.83958 0.83655 0.83351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 1.02 9.70 59.85 0.58 1.60 16 2 N -0.59 -11.91 2.86 -182.95 -0.52 -12.44 16 3 C 0.24 6.20 5.10 -5.19 -0.03 6.18 16 4 C -0.53 -14.59 9.39 -34.44 -0.32 -14.91 16 5 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 6 C 0.06 1.75 5.46 -17.82 -0.10 1.66 16 7 N -0.89 -26.17 13.29 55.43 0.74 -25.43 16 8 Si 0.90 21.66 29.54 -169.99 -5.02 16.64 16 9 H -0.28 -6.58 7.11 56.52 0.40 -6.18 16 10 H -0.28 -6.81 7.11 56.52 0.40 -6.41 16 11 H -0.27 -6.61 7.11 56.52 0.40 -6.21 16 12 C 0.48 9.38 6.77 -10.98 -0.07 9.31 16 13 O -0.53 -12.45 15.97 -13.29 -0.21 -12.66 16 14 C 0.13 1.86 2.89 -29.03 -0.08 1.78 16 15 H 0.13 1.50 7.14 -51.93 -0.37 1.13 16 16 O -0.53 -7.48 13.07 -54.09 -0.71 -8.19 16 17 C -0.09 -1.17 4.61 -104.63 -0.48 -1.65 16 18 C -0.08 -1.03 9.16 -39.58 -0.36 -1.39 16 19 C -0.09 -1.06 9.83 -39.55 -0.39 -1.45 16 20 C -0.03 -0.34 6.32 -39.46 -0.25 -0.59 16 21 Cl -0.05 -0.57 27.96 -51.86 -1.45 -2.02 16 22 C -0.03 -0.34 6.32 -39.47 -0.25 -0.59 16 23 Cl -0.05 -0.53 27.96 -51.86 -1.45 -1.98 16 24 C -0.09 -0.99 7.67 -39.56 -0.30 -1.29 16 25 H 0.05 0.60 8.14 -51.92 -0.42 0.18 16 26 H 0.08 1.27 8.03 -51.93 -0.42 0.85 16 27 H 0.06 0.74 3.51 -51.93 -0.18 0.56 16 28 H 0.03 0.89 8.07 -51.93 -0.42 0.47 16 29 H 0.04 1.25 7.49 -51.93 -0.39 0.86 16 30 H 0.26 7.30 8.31 -40.82 -0.34 6.96 16 31 H 0.38 4.66 7.41 45.56 0.34 5.00 16 32 H 0.14 1.65 7.19 -52.48 -0.38 1.27 16 33 H 0.15 1.35 8.06 -52.48 -0.42 0.93 16 34 H 0.15 1.36 6.98 -52.48 -0.37 0.99 16 LS Contribution 323.33 15.07 4.87 4.87 Total: -1.00 -32.58 323.33 -8.39 -40.97 By element: Atomic # 1 Polarization: 4.16 SS G_CDS: -2.57 Total: 1.59 kcal Atomic # 6 Polarization: 0.71 SS G_CDS: -2.06 Total: -1.35 kcal Atomic # 7 Polarization: -38.08 SS G_CDS: 0.21 Total: -37.87 kcal Atomic # 8 Polarization: -19.93 SS G_CDS: -0.92 Total: -20.85 kcal Atomic # 14 Polarization: 21.66 SS G_CDS: -5.02 Total: 16.64 kcal Atomic # 17 Polarization: -1.11 SS G_CDS: -2.90 Total: -4.01 kcal Total LS contribution 4.87 Total: 4.87 kcal Total: -32.58 -8.39 -40.97 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000294680641.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.326 kcal (2) G-P(sol) polarization free energy of solvation -32.583 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.909 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.972 kcal (6) G-S(sol) free energy of system = (1) + (5) -69.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds