Wall clock time and date at job start Tue Mar 31 2020 11:54:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.46499 * 120.00226 * 2 1 4 4 C 1.50702 * 109.47051 * 269.99934 * 3 2 1 5 5 H 1.07995 * 120.00152 * 0.02562 * 4 3 2 6 6 C 1.37875 * 120.00043 * 179.97438 * 4 3 2 7 7 N 1.31519 * 120.00244 * 359.97438 * 6 4 3 8 8 Si 1.86798 * 120.00079 * 180.02562 * 6 4 3 9 9 H 1.48500 * 109.47417 * 59.99674 * 8 6 4 10 10 H 1.48503 * 109.47120 * 179.97438 * 8 6 4 11 11 H 1.48502 * 109.47207 * 300.00010 * 8 6 4 12 12 C 1.34780 * 120.00063 * 179.97438 * 2 1 3 13 13 O 1.21285 * 120.00108 * 180.02562 * 12 2 1 14 14 C 1.50695 * 119.99948 * 359.97438 * 12 2 1 15 15 H 1.09008 * 109.46925 * 55.00059 * 14 12 2 16 16 O 1.42897 * 109.47124 * 175.00126 * 14 12 2 17 17 C 1.50704 * 109.47371 * 295.00456 * 14 12 2 18 18 C 1.38256 * 119.98316 * 99.99666 * 17 14 12 19 19 C 1.38205 * 120.04002 * 180.02562 * 18 17 14 20 20 C 1.38351 * 119.99812 * 359.97438 * 19 18 17 21 21 Cl 1.73598 * 120.01861 * 179.97438 * 20 19 18 22 22 C 1.38440 * 119.96172 * 0.02562 * 20 19 18 23 23 Cl 1.73602 * 120.02280 * 180.02562 * 22 20 19 24 24 C 1.38202 * 119.97586 * 280.01915 * 17 14 12 25 25 H 1.09003 * 109.47193 * 270.00270 * 1 2 3 26 26 H 1.08997 * 109.46816 * 30.00021 * 1 2 3 27 27 H 1.08999 * 109.47163 * 150.00052 * 1 2 3 28 28 H 1.09000 * 109.46926 * 29.99525 * 3 2 1 29 29 H 1.08998 * 109.47825 * 149.99952 * 3 2 1 30 30 H 0.96998 * 120.00649 * 179.97438 * 7 6 4 31 31 H 0.96696 * 113.99854 * 60.00474 * 16 14 12 32 32 H 1.08002 * 119.98627 * 0.04999 * 18 17 14 33 33 H 1.08000 * 120.00631 * 179.72458 * 19 18 17 34 34 H 1.07997 * 120.00532 * 0.02562 * 24 17 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.4488 1.7037 -1.4208 5 1 2.0975 1.0962 -2.2417 6 6 3.1261 2.8779 -1.6728 7 7 3.5526 3.6186 -0.6732 8 14 3.4368 3.4174 -3.4340 9 1 2.1391 3.5946 -4.1337 10 1 4.1784 4.7040 -3.4340 11 1 4.2395 2.3828 -4.1344 12 6 2.1389 -1.1672 0.0005 13 8 3.3518 -1.1672 0.0010 14 6 1.3855 -2.4723 0.0017 15 1 0.6930 -2.4927 -0.8399 16 8 2.3096 -3.5559 -0.1153 17 6 0.6146 -2.6062 1.2897 18 6 -0.7372 -2.3180 1.3191 19 6 -1.4451 -2.4399 2.4998 20 6 -0.8011 -2.8511 3.6532 21 17 -1.6897 -3.0038 5.1367 22 6 0.5525 -3.1398 3.6237 23 17 1.3621 -3.6565 5.0699 24 6 1.2597 -3.0167 2.4410 25 1 -0.3634 0.0000 1.0277 26 1 -0.3633 0.8900 -0.5138 27 1 -0.3633 -0.8900 -0.5138 28 1 1.6084 2.0284 0.5138 29 1 3.1500 1.1385 0.5138 30 1 4.0295 4.4444 -0.8504 31 1 2.9571 -3.5997 0.6015 32 1 -1.2405 -1.9977 0.4188 33 1 -2.5002 -2.2103 2.5231 34 1 2.3159 -3.2410 2.4176 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000294680643.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:54:58 Heat of formation + Delta-G solvation = -65.389323 kcal Electronic energy + Delta-G solvation = -21963.009127 eV Core-core repulsion = 18334.030945 eV Total energy + Delta-G solvation = -3628.978182 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -40.58664 -38.85474 -36.95099 -36.76488 -36.26378 -34.92514 -32.80469 -31.56466 -31.29613 -28.25127 -27.10382 -25.61325 -23.23197 -23.09460 -21.94531 -19.19240 -18.14666 -17.24302 -16.73275 -16.49593 -16.18855 -15.64201 -15.13727 -14.78508 -14.51230 -14.18915 -14.14194 -13.60094 -13.31399 -12.90080 -12.60417 -12.30970 -12.17974 -12.12282 -12.01811 -11.82721 -11.41615 -11.35568 -11.21500 -11.14286 -10.94968 -10.76511 -10.60059 -10.21300 -9.73308 -9.37054 -9.16064 -8.63161 -8.48767 -7.80514 -6.09965 -4.15553 0.59901 0.78784 1.57532 1.93648 3.01488 3.16354 3.28807 3.33664 3.36911 3.68741 4.28004 4.33132 4.36637 4.40973 4.65442 4.80294 4.92232 4.98456 5.20679 5.24864 5.40457 5.42820 5.58654 5.66685 5.79865 6.01581 6.05087 6.21941 6.89581 7.32107 7.38531 7.44753 7.84989 8.14801 8.21527 8.74709 8.91327 9.49772 10.98146 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.020878 B = 0.003448 C = 0.003353 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1340.794640 B = 8119.367403 C = 8348.156518 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.591 5.591 3 C 0.245 3.755 4 C -0.531 4.531 5 H 0.058 0.942 6 C 0.063 3.937 7 N -0.894 5.894 8 Si 0.899 3.101 9 H -0.276 1.276 10 H -0.286 1.286 11 H -0.276 1.276 12 C 0.480 3.520 13 O -0.527 6.527 14 C 0.131 3.869 15 H 0.133 0.867 16 O -0.530 6.530 17 C -0.092 4.092 18 C -0.091 4.091 19 C -0.097 4.097 20 C -0.030 4.030 21 Cl -0.052 7.052 22 C -0.026 4.026 23 Cl -0.048 7.048 24 C -0.084 4.084 25 H 0.051 0.949 26 H 0.078 0.922 27 H 0.058 0.942 28 H 0.034 0.966 29 H 0.044 0.956 30 H 0.265 0.735 31 H 0.381 0.619 32 H 0.149 0.851 33 H 0.147 0.853 34 H 0.143 0.857 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.551 -14.177 8.905 20.924 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.323 5.323 3 C 0.126 3.874 4 C -0.569 4.569 5 H 0.076 0.924 6 C -0.140 4.140 7 N -0.532 5.532 8 Si 0.727 3.273 9 H -0.202 1.202 10 H -0.211 1.211 11 H -0.201 1.201 12 C 0.265 3.735 13 O -0.404 6.404 14 C 0.068 3.932 15 H 0.150 0.850 16 O -0.335 6.335 17 C -0.093 4.093 18 C -0.109 4.109 19 C -0.116 4.116 20 C -0.058 4.058 21 Cl -0.023 7.023 22 C -0.054 4.054 23 Cl -0.019 7.019 24 C -0.103 4.103 25 H 0.069 0.931 26 H 0.097 0.903 27 H 0.077 0.923 28 H 0.052 0.948 29 H 0.062 0.938 30 H 0.074 0.926 31 H 0.231 0.769 32 H 0.166 0.834 33 H 0.164 0.836 34 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -12.138 -14.158 8.690 20.574 hybrid contribution 0.400 0.585 -0.177 0.730 sum -11.738 -13.574 8.512 19.861 Atomic orbital electron populations 1.22109 0.81613 1.02695 1.00586 1.48174 1.06152 1.07788 1.70222 1.19344 0.92562 0.77804 0.97694 1.21366 1.37002 1.06442 0.92114 0.92425 1.24934 0.95217 0.96309 0.97532 1.69918 1.38120 1.14334 1.30871 0.86542 0.78412 0.77875 0.84511 1.20205 1.21127 1.20102 1.20852 0.88587 0.85501 0.78570 1.90712 1.13351 1.86491 1.49863 1.20817 0.90491 0.86877 0.95052 0.85001 1.86605 1.46581 1.47294 1.53068 1.20396 0.94663 0.98818 0.95445 1.21322 0.93058 0.97849 0.98673 1.21023 1.00920 0.99283 0.90350 1.20798 0.90911 1.04640 0.89407 1.98389 1.74767 1.96228 1.32868 1.20651 0.91315 1.03872 0.89558 1.98396 1.78938 1.88794 1.35775 1.20766 1.00670 0.98977 0.89910 0.93097 0.90344 0.92342 0.94794 0.93788 0.92565 0.76927 0.83353 0.83577 0.83966 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 1.04 8.51 59.85 0.51 1.55 16 2 N -0.59 -11.74 2.86 -182.95 -0.52 -12.26 16 3 C 0.24 6.21 5.16 -5.19 -0.03 6.18 16 4 C -0.53 -14.70 9.39 -34.44 -0.32 -15.02 16 5 H 0.06 1.59 7.81 -52.49 -0.41 1.18 16 6 C 0.06 1.76 5.46 -17.82 -0.10 1.66 16 7 N -0.89 -26.17 13.29 55.43 0.74 -25.44 16 8 Si 0.90 21.51 29.54 -169.99 -5.02 16.49 16 9 H -0.28 -6.39 7.11 56.52 0.40 -5.99 16 10 H -0.29 -6.74 7.11 56.52 0.40 -6.34 16 11 H -0.28 -6.64 7.11 56.52 0.40 -6.24 16 12 C 0.48 9.38 7.06 -10.99 -0.08 9.30 16 13 O -0.53 -12.70 15.90 -14.31 -0.23 -12.93 16 14 C 0.13 1.84 2.96 -29.04 -0.09 1.75 16 15 H 0.13 1.59 7.00 -51.92 -0.36 1.22 16 16 O -0.53 -7.68 12.84 -55.09 -0.71 -8.38 16 17 C -0.09 -1.08 4.52 -104.63 -0.47 -1.55 16 18 C -0.09 -0.85 6.94 -39.59 -0.27 -1.13 16 19 C -0.10 -0.87 9.83 -39.55 -0.39 -1.26 16 20 C -0.03 -0.32 6.32 -39.47 -0.25 -0.57 16 21 Cl -0.05 -0.52 27.96 -51.86 -1.45 -1.97 16 22 C -0.03 -0.31 6.32 -39.46 -0.25 -0.55 16 23 Cl -0.05 -0.54 27.96 -51.86 -1.45 -1.99 16 24 C -0.08 -1.00 9.10 -39.55 -0.36 -1.36 16 25 H 0.05 0.63 6.81 -51.93 -0.35 0.28 16 26 H 0.08 1.15 8.07 -51.93 -0.42 0.73 16 27 H 0.06 0.62 4.33 -51.93 -0.22 0.40 16 28 H 0.03 0.87 8.07 -51.93 -0.42 0.45 16 29 H 0.04 1.27 7.42 -51.93 -0.39 0.88 16 30 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 31 H 0.38 4.74 7.25 45.56 0.33 5.07 16 32 H 0.15 1.03 5.95 -52.49 -0.31 0.71 16 33 H 0.15 0.95 8.06 -52.49 -0.42 0.52 16 34 H 0.14 1.59 6.79 -52.49 -0.36 1.23 16 LS Contribution 319.09 15.07 4.81 4.81 Total: -1.00 -33.15 319.09 -8.40 -41.56 By element: Atomic # 1 Polarization: 3.58 SS G_CDS: -2.47 Total: 1.11 kcal Atomic # 6 Polarization: 1.09 SS G_CDS: -2.10 Total: -1.00 kcal Atomic # 7 Polarization: -37.91 SS G_CDS: 0.21 Total: -37.70 kcal Atomic # 8 Polarization: -20.38 SS G_CDS: -0.94 Total: -21.31 kcal Atomic # 14 Polarization: 21.51 SS G_CDS: -5.02 Total: 16.49 kcal Atomic # 17 Polarization: -1.05 SS G_CDS: -2.90 Total: -3.96 kcal Total LS contribution 4.81 Total: 4.81 kcal Total: -33.15 -8.40 -41.56 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000294680643.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.833 kcal (2) G-P(sol) polarization free energy of solvation -33.155 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.988 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.401 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.556 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.389 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds