Wall clock time and date at job start Tue Mar 31 2020 11:18:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.31516 * 1 3 3 Si 1.86796 * 120.00376 * 2 1 4 4 H 1.48503 * 109.47239 * 180.02562 * 3 2 1 5 5 H 1.48497 * 109.47396 * 300.00720 * 3 2 1 6 6 H 1.48505 * 109.46973 * 60.00069 * 3 2 1 7 7 C 1.37879 * 119.99712 * 180.02562 * 2 1 3 8 8 H 1.07995 * 120.00185 * 179.97438 * 7 2 1 9 9 C 1.50702 * 119.99647 * 0.02562 * 7 2 1 10 10 N 1.46506 * 109.46674 * 180.02562 * 9 7 2 11 11 C 1.46499 * 120.00235 * 89.99630 * 10 9 7 12 12 C 1.50697 * 109.47368 * 270.00119 * 11 10 9 13 13 C 1.34515 * 125.79159 * 89.99416 * 12 11 10 14 14 C 1.41385 * 106.84000 * 180.02562 * 13 12 11 15 15 C 1.34507 * 106.84104 * 0.02562 * 14 13 12 16 16 O 1.34300 * 108.42410 * 359.97438 * 15 14 13 17 17 C 1.34776 * 119.99605 * 269.99410 * 10 9 7 18 18 O 1.21273 * 120.00320 * 0.02562 * 17 10 9 19 19 C 1.50707 * 119.99677 * 179.97438 * 17 10 9 20 20 H 1.08998 * 115.54661 * 34.41855 * 19 17 10 21 21 C 1.52998 * 117.49831 * 180.08538 * 19 17 10 22 22 C 1.52995 * 117.49860 * 248.75029 * 19 17 10 23 23 Cl 1.80298 * 117.50137 * 359.97438 * 22 19 17 24 24 Cl 1.80303 * 117.49599 * 145.02462 * 22 19 17 25 25 H 0.97009 * 119.99198 * 359.97438 * 1 2 3 26 26 H 1.08995 * 109.47566 * 59.99787 * 9 7 2 27 27 H 1.08998 * 109.46901 * 299.99499 * 9 7 2 28 28 H 1.09002 * 109.47223 * 149.99521 * 11 10 9 29 29 H 1.09010 * 109.46962 * 29.99719 * 11 10 9 30 30 H 1.08001 * 126.57671 * 0.29417 * 13 12 11 31 31 H 1.08003 * 126.57418 * 180.02562 * 14 13 12 32 32 H 1.08001 * 125.78820 * 179.97438 * 15 14 13 33 33 H 1.08993 * 117.50059 * 214.97803 * 21 19 17 34 34 H 1.08997 * 117.49500 * 359.97438 * 21 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.3152 0.0000 0.0000 3 14 2.2493 1.6176 0.0000 4 1 3.7093 1.3462 -0.0006 5 1 1.8905 2.3965 -1.2124 6 1 1.8905 2.3964 1.2126 7 6 2.0045 -1.1941 -0.0005 8 1 3.0844 -1.1942 -0.0010 9 6 1.2508 -2.4991 -0.0017 10 7 2.2028 -3.6127 -0.0015 11 6 2.6779 -4.1701 1.2673 12 6 3.9208 -3.4379 1.7036 13 6 3.9551 -2.3377 2.4767 14 6 5.3165 -1.9899 2.6339 15 6 6.0325 -2.8980 1.9470 16 8 5.1820 -3.7728 1.3857 17 6 2.6415 -4.1244 -1.1686 18 8 2.2486 -3.6628 -2.2189 19 6 3.6212 -5.2696 -1.1684 20 1 3.5040 -5.9883 -0.3574 21 6 4.0827 -5.8047 -2.5254 22 6 5.0418 -4.9840 -1.6594 23 17 5.4155 -3.3034 -2.1948 24 17 6.3939 -5.8628 -0.8528 25 1 -0.4849 0.8402 0.0004 26 1 0.6245 -2.5563 -0.8919 27 1 0.6239 -2.5574 0.8880 28 1 2.9063 -5.2279 1.1367 29 1 1.9040 -4.0565 2.0266 30 1 3.1060 -1.8218 2.9001 31 1 5.7066 -1.1551 3.1974 32 1 7.1089 -2.9200 1.8613 33 1 4.2696 -6.8754 -2.6070 34 1 3.6774 -5.3288 -3.4183 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299267272.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:18:24 Heat of formation + Delta-G solvation = 7.356459 kcal Electronic energy + Delta-G solvation = -23004.787460 eV Core-core repulsion = 19378.963772 eV Total energy + Delta-G solvation = -3625.823689 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.00585 -39.58905 -37.08193 -35.87332 -35.39292 -34.79956 -32.67643 -32.40077 -29.99601 -27.81165 -25.48411 -24.41208 -22.23064 -21.92278 -21.19399 -20.24978 -18.60743 -17.48719 -17.00459 -16.44658 -15.81144 -15.42634 -15.19874 -14.61434 -14.41504 -13.91595 -13.63976 -12.96170 -12.73930 -12.60610 -12.34284 -12.24948 -12.16964 -11.99679 -11.79325 -11.42641 -11.22550 -11.03941 -10.91948 -10.73021 -10.65577 -10.43142 -10.19937 -9.78665 -9.65937 -9.30854 -9.13579 -8.43338 -8.08956 -7.77671 -6.04079 -4.05722 1.24456 2.17473 2.27513 2.72809 3.12885 3.29971 3.38403 3.42649 3.44576 3.66864 3.83239 4.31294 4.41800 4.48197 4.85812 5.04877 5.14592 5.31611 5.32946 5.44836 5.54639 5.68751 5.77206 5.82490 6.30683 6.50534 6.57149 6.89717 7.03459 7.32885 7.42580 7.66347 7.94055 8.18765 8.22503 8.79585 9.01658 9.58728 11.04656 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.014160 B = 0.006416 C = 0.005631 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1976.871203 B = 4363.314738 C = 4971.370423 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.897 5.897 2 C 0.062 3.938 3 Si 0.890 3.110 4 H -0.273 1.273 5 H -0.284 1.284 6 H -0.284 1.284 7 C -0.512 4.512 8 H 0.062 0.938 9 C 0.246 3.754 10 N -0.584 5.584 11 C 0.194 3.806 12 C -0.032 4.032 13 C -0.169 4.169 14 C -0.217 4.217 15 C -0.046 4.046 16 O -0.166 6.166 17 C 0.539 3.461 18 O -0.516 6.516 19 C -0.159 4.159 20 H 0.139 0.861 21 C -0.120 4.120 22 C 0.030 3.970 23 Cl -0.069 7.069 24 Cl -0.097 7.097 25 H 0.261 0.739 26 H 0.047 0.953 27 H 0.035 0.965 28 H 0.080 0.920 29 H 0.109 0.891 30 H 0.147 0.853 31 H 0.139 0.861 32 H 0.191 0.809 33 H 0.123 0.877 34 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.260 -13.003 2.620 16.769 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.537 5.537 2 C -0.139 4.139 3 Si 0.718 3.282 4 H -0.197 1.197 5 H -0.211 1.211 6 H -0.210 1.210 7 C -0.551 4.551 8 H 0.080 0.920 9 C 0.128 3.872 10 N -0.315 5.315 11 C 0.070 3.930 12 C -0.083 4.083 13 C -0.189 4.189 14 C -0.237 4.237 15 C -0.115 4.115 16 O -0.062 6.062 17 C 0.324 3.676 18 O -0.392 6.392 19 C -0.182 4.182 20 H 0.156 0.844 21 C -0.158 4.158 22 C -0.022 4.022 23 Cl -0.041 7.041 24 Cl -0.070 7.070 25 H 0.071 0.929 26 H 0.065 0.935 27 H 0.053 0.947 28 H 0.098 0.902 29 H 0.127 0.873 30 H 0.165 0.835 31 H 0.157 0.843 32 H 0.208 0.792 33 H 0.141 0.859 34 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 10.060 -12.790 1.895 16.382 hybrid contribution 0.827 1.490 0.400 1.751 sum 10.887 -11.300 2.295 15.858 Atomic orbital electron populations 1.69937 1.05892 1.26756 1.51110 1.24865 0.94746 0.98977 0.95338 0.86550 0.80320 0.83808 0.77508 1.19738 1.21051 1.21036 1.21432 0.93579 0.90090 1.49953 0.91988 1.19423 0.87022 0.82139 0.98660 1.48241 1.44696 1.35401 1.03172 1.19845 0.89763 0.95340 0.88052 1.22801 0.84128 0.99974 1.01438 1.21554 0.97270 0.97172 1.02863 1.21766 0.93904 1.02192 1.05793 1.23757 0.95432 0.92396 0.99878 1.84009 1.15508 1.47199 1.59454 1.18978 0.81350 0.82641 0.84601 1.90703 1.57239 1.60557 1.30696 1.23362 0.92653 1.01448 1.00712 0.84378 1.23933 0.95700 1.00491 0.95668 1.26318 0.85311 0.86775 1.03803 1.98796 1.95120 1.20229 1.89999 1.98729 1.51112 1.75676 1.81466 0.92902 0.93531 0.94721 0.90219 0.87334 0.83473 0.84335 0.79240 0.85862 0.85028 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.90 -26.05 13.29 55.43 0.74 -25.32 16 2 C 0.06 1.74 5.46 -17.82 -0.10 1.64 16 3 Si 0.89 22.10 29.54 -169.99 -5.02 17.08 16 4 H -0.27 -6.82 7.11 56.52 0.40 -6.42 16 5 H -0.28 -7.11 7.11 56.52 0.40 -6.71 16 6 H -0.28 -6.87 7.11 56.52 0.40 -6.47 16 7 C -0.51 -13.91 9.14 -34.44 -0.31 -14.22 16 8 H 0.06 1.76 7.65 -52.49 -0.40 1.36 16 9 C 0.25 6.03 5.20 -5.19 -0.03 6.01 16 10 N -0.58 -11.59 2.44 -176.43 -0.43 -12.02 16 11 C 0.19 3.02 5.81 -5.20 -0.03 2.99 16 12 C -0.03 -0.54 6.90 -35.63 -0.25 -0.79 16 13 C -0.17 -2.97 10.41 -39.70 -0.41 -3.38 16 14 C -0.22 -3.45 10.91 -39.70 -0.43 -3.89 16 15 C -0.05 -0.68 12.09 29.41 0.36 -0.33 16 16 O -0.17 -2.65 10.65 5.71 0.06 -2.59 16 17 C 0.54 10.54 6.54 -10.98 -0.07 10.47 16 18 O -0.52 -12.12 15.67 5.56 0.09 -12.03 16 19 C -0.16 -2.31 5.13 -91.77 -0.47 -2.78 16 20 H 0.14 1.62 6.44 -51.93 -0.33 1.29 16 21 C -0.12 -1.48 9.73 -26.69 -0.26 -1.74 16 22 C 0.03 0.43 3.62 -26.69 -0.10 0.34 16 23 Cl -0.07 -1.21 28.18 -51.86 -1.46 -2.68 16 24 Cl -0.10 -1.21 29.29 -51.86 -1.52 -2.73 16 25 H 0.26 7.23 8.31 -40.82 -0.34 6.89 16 26 H 0.05 1.30 7.42 -51.93 -0.39 0.91 16 27 H 0.03 0.85 7.89 -51.93 -0.41 0.44 16 28 H 0.08 0.97 6.00 -51.93 -0.31 0.66 16 29 H 0.11 1.52 7.89 -51.92 -0.41 1.11 16 30 H 0.15 2.66 8.06 -52.49 -0.42 2.24 16 31 H 0.14 1.93 8.06 -52.48 -0.42 1.51 16 32 H 0.19 2.14 8.06 -52.49 -0.42 1.71 16 33 H 0.12 1.09 8.14 -51.93 -0.42 0.67 16 34 H 0.13 1.78 7.67 -51.93 -0.40 1.38 16 LS Contribution 332.91 15.07 5.02 5.02 Total: -1.00 -32.25 332.91 -8.11 -40.37 By element: Atomic # 1 Polarization: 4.05 SS G_CDS: -3.48 Total: 0.57 kcal Atomic # 6 Polarization: -3.57 SS G_CDS: -2.10 Total: -5.67 kcal Atomic # 7 Polarization: -37.64 SS G_CDS: 0.31 Total: -37.34 kcal Atomic # 8 Polarization: -14.77 SS G_CDS: 0.15 Total: -14.62 kcal Atomic # 14 Polarization: 22.10 SS G_CDS: -5.02 Total: 17.08 kcal Atomic # 17 Polarization: -2.42 SS G_CDS: -2.98 Total: -5.40 kcal Total LS contribution 5.02 Total: 5.02 kcal Total: -32.25 -8.11 -40.37 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299267272.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 47.723 kcal (2) G-P(sol) polarization free energy of solvation -32.255 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 15.468 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.112 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.366 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.356 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds