Wall clock time and date at job start Tue Mar 31 2020 11:47:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 H 1.09005 * 109.46862 * 2 1 4 4 O 1.42903 * 109.46967 * 240.00451 * 2 1 3 5 5 C 1.35922 * 117.00233 * 85.96727 * 4 2 1 6 6 C 1.38722 * 120.05183 * 354.75947 * 5 4 2 7 7 C 1.38164 * 119.97792 * 180.27842 * 6 5 4 8 8 C 1.38262 * 120.08793 * 359.74375 * 7 6 5 9 9 C 1.38361 * 120.10682 * 359.95811 * 8 7 6 10 10 Cl 1.73598 * 119.99013 * 180.02562 * 9 8 7 11 11 C 1.38370 * 120.01559 * 0.04045 * 9 8 7 12 12 Cl 1.73596 * 120.04168 * 179.97438 * 11 9 8 13 13 C 1.50694 * 109.47568 * 120.00095 * 2 1 3 14 14 O 1.21294 * 120.00186 * 119.99829 * 13 2 1 15 15 N 1.34784 * 119.99839 * 299.99908 * 13 2 1 16 16 C 1.46502 * 119.99975 * 0.02562 * 15 13 2 17 17 C 1.37100 * 119.99939 * 179.97438 * 15 13 2 18 18 H 1.08003 * 119.99824 * 23.55671 * 17 15 13 19 19 C 1.38945 * 119.99816 * 203.55785 * 17 15 13 20 20 N 1.31412 * 120.00574 * 10.15092 * 19 17 15 21 21 Si 1.86804 * 119.99719 * 190.15044 * 19 17 15 22 22 H 1.48503 * 109.47015 * 60.00092 * 21 19 17 23 23 H 1.48503 * 109.46993 * 179.97438 * 21 19 17 24 24 H 1.48498 * 109.47032 * 299.99821 * 21 19 17 25 25 H 1.09005 * 109.46862 * 179.97438 * 1 2 3 26 26 H 1.09005 * 109.47143 * 299.99770 * 1 2 3 27 27 H 1.08991 * 109.47795 * 60.00160 * 1 2 3 28 28 H 1.07997 * 120.01557 * 359.97438 * 6 5 4 29 29 H 1.07997 * 119.95328 * 179.72250 * 7 6 5 30 30 H 1.07999 * 119.94687 * 179.97438 * 8 7 6 31 31 H 1.09003 * 109.47151 * 92.86369 * 16 15 13 32 32 H 1.09002 * 109.46774 * 212.86667 * 16 15 13 33 33 H 1.09002 * 109.46914 * 332.86080 * 16 15 13 34 34 H 0.96991 * 120.00619 * 180.02562 * 20 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 1 1.8933 1.0277 0.0000 4 8 2.0063 -0.6736 -1.1669 5 6 2.1317 0.0676 -2.2993 6 6 1.7015 1.3863 -2.3176 7 6 1.8245 2.1366 -3.4713 8 6 2.3806 1.5765 -4.6064 9 6 2.8165 0.2634 -4.5903 10 17 3.5149 -0.4367 -6.0171 11 6 2.6955 -0.4920 -3.4373 12 17 3.2416 -2.1397 -3.4165 13 6 2.0324 -0.7104 1.2304 14 8 2.7298 -1.6966 1.1191 15 7 1.7069 -0.2499 2.4546 16 6 0.8641 0.9409 2.5890 17 6 2.1635 -0.8965 3.5739 18 1 3.0527 -1.5071 3.5198 19 6 1.4824 -0.7661 4.7779 20 7 0.3000 -0.1933 4.8054 21 14 2.2475 -1.4052 6.3578 22 1 3.5381 -0.7113 6.5987 23 1 1.3269 -1.1458 7.4938 24 1 2.4858 -2.8659 6.2367 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 -0.3634 0.5137 -0.8899 28 1 1.2662 1.8250 -1.4320 29 1 1.4853 3.1618 -3.4865 30 1 2.4752 2.1649 -5.5071 31 1 -0.1800 0.6394 2.6737 32 1 1.1563 1.4938 3.4818 33 1 0.9891 1.5754 1.7115 34 1 -0.1754 -0.1020 5.6459 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299577571.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:47:09 Heat of formation + Delta-G solvation = -39.909430 kcal Electronic energy + Delta-G solvation = -21912.314895 eV Core-core repulsion = 18284.441603 eV Total energy + Delta-G solvation = -3627.873291 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -40.51101 -38.81113 -37.47063 -36.42734 -36.32067 -34.75575 -32.47232 -31.17657 -30.54537 -29.72527 -26.35811 -25.27095 -23.85613 -22.98369 -22.18088 -19.34697 -18.51165 -17.02569 -16.56397 -16.39919 -15.94825 -15.45204 -15.06633 -14.71287 -14.40701 -14.23781 -14.04957 -13.60239 -13.42001 -12.78878 -12.41452 -12.26148 -12.04717 -11.79132 -11.70449 -11.51171 -11.31463 -11.25687 -11.18725 -11.06992 -10.82724 -10.69291 -10.65503 -10.43845 -10.32631 -9.09047 -8.89931 -8.52502 -8.22044 -7.79286 -6.39957 -3.98404 0.78142 1.06824 1.71286 2.24930 3.06053 3.14489 3.20917 3.27234 3.32660 3.71863 4.09381 4.58097 4.67763 4.75691 4.79834 4.99377 5.04311 5.12698 5.19601 5.37547 5.46112 5.73507 5.82525 5.86105 5.94741 6.07368 6.10866 6.27981 6.38832 6.71717 7.08277 7.30614 7.48845 8.02089 8.38235 9.08176 9.28062 9.83139 10.63676 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.028299 B = 0.003301 C = 0.003051 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 989.195824 B = 8480.048340 C = 9176.044850 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.184 4.184 2 C 0.073 3.927 3 H 0.086 0.914 4 O -0.264 6.264 5 C 0.164 3.836 6 C -0.202 4.202 7 C -0.062 4.062 8 C -0.149 4.149 9 C 0.006 3.994 10 Cl -0.049 7.049 11 C -0.073 4.073 12 Cl -0.032 7.032 13 C 0.450 3.550 14 O -0.563 6.563 15 N -0.439 5.439 16 C 0.107 3.893 17 C -0.306 4.306 18 H 0.100 0.900 19 C 0.033 3.967 20 N -0.884 5.884 21 Si 0.930 3.070 22 H -0.273 1.273 23 H -0.283 1.283 24 H -0.272 1.272 25 H 0.072 0.928 26 H 0.096 0.904 27 H 0.061 0.939 28 H 0.146 0.854 29 H 0.140 0.860 30 H 0.140 0.860 31 H 0.066 0.934 32 H 0.071 0.929 33 H 0.025 0.975 34 H 0.269 0.731 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.484 7.915 -16.058 17.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.241 4.241 2 C 0.013 3.987 3 H 0.103 0.897 4 O -0.175 6.175 5 C 0.116 3.884 6 C -0.221 4.221 7 C -0.080 4.080 8 C -0.168 4.168 9 C -0.021 4.021 10 Cl -0.020 7.020 11 C -0.102 4.102 12 Cl -0.003 7.003 13 C 0.236 3.764 14 O -0.445 6.445 15 N -0.160 5.160 16 C -0.036 4.036 17 C -0.434 4.434 18 H 0.118 0.882 19 C -0.170 4.170 20 N -0.523 5.523 21 Si 0.756 3.244 22 H -0.198 1.198 23 H -0.209 1.209 24 H -0.197 1.197 25 H 0.091 0.909 26 H 0.114 0.886 27 H 0.080 0.920 28 H 0.164 0.836 29 H 0.158 0.842 30 H 0.158 0.842 31 H 0.085 0.915 32 H 0.090 0.910 33 H 0.043 0.957 34 H 0.079 0.921 Dipole moment (debyes) X Y Z Total from point charges -0.131 7.037 -16.012 17.490 hybrid contribution 0.141 -0.146 0.777 0.803 sum 0.010 6.891 -15.235 16.721 Atomic orbital electron populations 1.22561 0.93250 1.04557 1.03771 1.22398 0.95432 0.96549 0.84300 0.89682 1.86354 1.79563 1.35933 1.15613 1.18674 0.92841 0.90143 0.86788 1.21480 1.06405 0.93297 1.00915 1.20965 0.95900 0.99870 0.91262 1.20867 1.02861 0.92848 1.00204 1.20470 1.00497 0.93715 0.87450 1.98382 1.82449 1.84358 1.36807 1.19938 1.07717 0.89445 0.93058 1.98397 1.87942 1.15423 1.98576 1.19448 0.86934 0.86634 0.83417 1.90582 1.41070 1.27292 1.85554 1.43420 1.44758 1.24046 1.03745 1.21729 0.96161 0.86867 0.98888 1.19626 1.09755 1.28625 0.85366 0.88249 1.25353 0.94880 0.96965 0.99837 1.69948 1.11554 1.43296 1.27518 0.85936 0.78664 0.79632 0.80140 1.19831 1.20874 1.19671 0.90894 0.88578 0.92019 0.83631 0.84230 0.84182 0.91535 0.91046 0.95655 0.92054 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 -2.87 8.81 37.16 0.33 -2.54 16 2 C 0.07 1.33 1.83 -27.89 -0.05 1.28 16 3 H 0.09 1.33 5.50 -51.93 -0.29 1.05 16 4 O -0.26 -5.04 8.79 -39.40 -0.35 -5.39 16 5 C 0.16 2.56 6.60 -39.20 -0.26 2.30 16 6 C -0.20 -2.44 8.30 -39.43 -0.33 -2.77 16 7 C -0.06 -0.59 10.04 -39.60 -0.40 -0.98 16 8 C -0.15 -1.49 9.83 -39.53 -0.39 -1.88 16 9 C 0.01 0.08 6.32 -39.49 -0.25 -0.17 16 10 Cl -0.05 -0.56 27.96 -51.86 -1.45 -2.01 16 11 C -0.07 -1.11 6.34 -39.33 -0.25 -1.36 16 12 Cl -0.03 -0.53 27.51 -51.86 -1.43 -1.95 16 13 C 0.45 10.91 7.11 -10.99 -0.08 10.83 16 14 O -0.56 -16.07 16.20 -14.36 -0.23 -16.31 16 15 N -0.44 -10.84 3.02 -122.19 -0.37 -11.20 16 16 C 0.11 2.19 7.04 59.85 0.42 2.62 16 17 C -0.31 -8.34 9.27 -14.93 -0.14 -8.47 16 18 H 0.10 2.85 7.42 -52.48 -0.39 2.46 16 19 C 0.03 0.84 5.14 -17.47 -0.09 0.75 16 20 N -0.88 -22.52 10.60 55.50 0.59 -21.93 16 21 Si 0.93 20.31 29.56 -169.99 -5.03 15.28 16 22 H -0.27 -5.87 7.11 56.52 0.40 -5.47 16 23 H -0.28 -6.03 7.11 56.52 0.40 -5.63 16 24 H -0.27 -6.03 7.11 56.52 0.40 -5.62 16 25 H 0.07 1.25 8.14 -51.93 -0.42 0.83 16 26 H 0.10 1.47 4.58 -51.93 -0.24 1.23 16 27 H 0.06 0.77 7.04 -51.93 -0.37 0.40 16 28 H 0.15 1.54 5.48 -52.49 -0.29 1.26 16 29 H 0.14 0.87 8.06 -52.49 -0.42 0.45 16 30 H 0.14 1.04 8.06 -52.49 -0.42 0.61 16 31 H 0.07 1.40 6.48 -51.93 -0.34 1.06 16 32 H 0.07 1.55 7.15 -51.93 -0.37 1.18 16 33 H 0.02 0.41 5.79 -51.93 -0.30 0.11 16 34 H 0.27 6.53 8.31 -40.82 -0.34 6.19 16 LS Contribution 313.58 15.07 4.73 4.73 Total: -1.00 -31.08 313.58 -7.99 -39.07 By element: Atomic # 1 Polarization: 3.08 SS G_CDS: -2.98 Total: 0.10 kcal Atomic # 6 Polarization: 1.10 SS G_CDS: -1.48 Total: -0.38 kcal Atomic # 7 Polarization: -33.36 SS G_CDS: 0.22 Total: -33.14 kcal Atomic # 8 Polarization: -21.11 SS G_CDS: -0.58 Total: -21.69 kcal Atomic # 14 Polarization: 20.31 SS G_CDS: -5.03 Total: 15.28 kcal Atomic # 17 Polarization: -1.09 SS G_CDS: -2.88 Total: -3.96 kcal Total LS contribution 4.73 Total: 4.73 kcal Total: -31.08 -7.99 -39.07 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299577571.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.838 kcal (2) G-P(sol) polarization free energy of solvation -31.080 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -31.917 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.992 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.072 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.909 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds