Wall clock time and date at job start Tue Mar 31 2020 11:42:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53006 * 1 3 3 H 1.09001 * 109.47002 * 2 1 4 4 C 1.50697 * 109.47239 * 119.99930 * 2 1 3 5 5 H 1.08002 * 119.99362 * 119.99715 * 4 2 1 6 6 C 1.37867 * 120.00258 * 300.00370 * 4 2 1 7 7 N 1.31511 * 120.00203 * 359.97438 * 6 4 2 8 8 Si 1.86805 * 120.00057 * 179.97438 * 6 4 2 9 9 H 1.48499 * 109.47094 * 89.99954 * 8 6 4 10 10 H 1.48499 * 109.46907 * 209.99714 * 8 6 4 11 11 H 1.48495 * 109.46933 * 330.00015 * 8 6 4 12 12 N 1.46504 * 109.46883 * 240.00503 * 2 1 3 13 13 C 1.34773 * 120.00111 * 84.99828 * 12 2 1 14 14 O 1.21277 * 120.00090 * 0.02562 * 13 12 2 15 15 C 1.50703 * 119.99847 * 179.97438 * 13 12 2 16 16 O 1.42901 * 109.47052 * 180.02562 * 15 13 12 17 17 C 1.35945 * 116.99814 * 179.97438 * 16 15 13 18 18 C 1.38789 * 120.06452 * 269.72370 * 17 16 15 19 19 Cl 1.73600 * 120.03378 * 359.97438 * 18 17 16 20 20 C 1.38267 * 119.93746 * 179.72467 * 18 17 16 21 21 C 1.38264 * 120.05851 * 0.55463 * 20 18 17 22 22 C 1.38254 * 120.12899 * 359.72201 * 21 20 18 23 23 C 1.38271 * 120.06457 * 0.02562 * 22 21 20 24 24 Cl 1.73597 * 120.03229 * 179.97438 * 23 22 21 25 25 H 1.09001 * 109.46998 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47050 * 299.99734 * 1 2 3 27 27 H 1.09001 * 109.46801 * 59.99846 * 1 2 3 28 28 H 0.97006 * 120.00645 * 180.02562 * 7 6 4 29 29 H 0.97003 * 119.99624 * 264.99510 * 12 2 1 30 30 H 1.08999 * 109.46659 * 299.99752 * 15 13 12 31 31 H 1.08988 * 109.47257 * 59.99966 * 15 13 12 32 32 H 1.07991 * 119.97284 * 180.29940 * 20 18 17 33 33 H 1.08005 * 119.93320 * 179.74949 * 21 20 18 34 34 H 1.08002 * 119.96612 * 179.97438 * 22 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5301 0.0000 0.0000 3 1 1.8934 1.0277 0.0000 4 6 2.0324 -0.7104 1.2304 5 1 2.6533 -1.5885 1.1312 6 6 1.6993 -0.2394 2.4826 7 7 0.9436 0.8301 2.6034 8 14 2.3215 -1.1205 4.0079 9 1 3.6298 -0.5460 4.4123 10 1 1.3433 -0.9494 5.1119 11 1 2.4860 -2.5663 3.7118 12 7 2.0184 -0.6905 -1.1963 13 6 2.1470 -0.0181 -2.3572 14 8 1.8590 1.1587 -2.4115 15 6 2.6499 -0.7284 -3.5876 16 8 2.6983 0.1900 -4.6813 17 6 3.1339 -0.2939 -5.8747 18 6 4.4838 -0.2458 -6.1935 19 17 5.6186 0.4334 -5.0689 20 6 4.9247 -0.7439 -7.4057 21 6 4.0207 -1.2793 -8.3045 22 6 2.6747 -1.3233 -7.9919 23 6 2.2287 -0.8314 -6.7791 24 17 0.5383 -0.8865 -6.3878 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 0.7095 1.1617 3.4844 29 1 2.2491 -1.6317 -1.1527 30 1 3.6492 -1.1201 -3.3980 31 1 1.9777 -1.5506 -3.8326 32 1 5.9756 -0.7112 -7.6523 33 1 4.3669 -1.6641 -9.2524 34 1 1.9708 -1.7417 -8.6962 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000299640243.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:42:27 Heat of formation + Delta-G solvation = -60.580126 kcal Electronic energy + Delta-G solvation = -21315.162887 eV Core-core repulsion = 17686.393247 eV Total energy + Delta-G solvation = -3628.769640 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 1.49 seconds Orbital eigenvalues (eV) -40.38521 -38.89193 -37.33740 -36.93933 -36.45072 -34.74730 -32.42081 -31.03068 -30.71490 -29.37849 -27.15146 -25.24814 -23.28728 -22.87686 -21.27970 -19.51454 -18.47874 -17.42431 -17.00969 -16.93361 -15.75294 -15.48732 -15.07456 -14.93638 -14.69025 -14.64006 -14.02041 -13.36542 -13.10153 -12.90105 -12.55075 -12.48251 -12.32208 -12.13313 -11.66559 -11.35815 -11.24408 -11.18254 -11.08937 -10.97634 -10.74479 -10.31601 -10.23748 -10.11070 -9.09977 -9.06895 -9.05192 -9.00174 -8.55447 -7.94678 -6.12501 -4.22133 0.53404 0.57437 1.61605 2.03811 2.79793 3.24462 3.25600 3.30668 3.31757 3.34049 4.17461 4.34888 4.40960 4.58160 4.71435 4.88312 4.95521 5.12713 5.19572 5.27501 5.42863 5.55320 5.62156 5.76429 6.02171 6.82354 6.96882 7.10432 7.15242 7.43129 7.55760 7.68588 7.90954 8.14296 8.61536 8.76949 9.07846 9.45207 10.93514 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.020041 B = 0.003252 C = 0.002951 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1396.809547 B = 8608.340366 C = 9487.351775 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C 0.267 3.733 3 H 0.050 0.950 4 C -0.534 4.534 5 H 0.062 0.938 6 C 0.066 3.934 7 N -0.883 5.883 8 Si 0.902 3.098 9 H -0.279 1.279 10 H -0.285 1.285 11 H -0.273 1.273 12 N -0.706 5.706 13 C 0.506 3.494 14 O -0.528 6.528 15 C 0.047 3.953 16 O -0.290 6.290 17 C 0.117 3.883 18 C -0.047 4.047 19 Cl -0.038 7.038 20 C -0.097 4.097 21 C -0.104 4.104 22 C -0.097 4.097 23 C -0.047 4.047 24 Cl -0.039 7.039 25 H 0.027 0.973 26 H 0.091 0.909 27 H 0.015 0.985 28 H 0.265 0.735 29 H 0.389 0.611 30 H 0.081 0.919 31 H 0.080 0.920 32 H 0.144 0.856 33 H 0.144 0.856 34 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.432 -7.779 -22.322 24.498 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.206 4.206 2 C 0.166 3.834 3 H 0.068 0.932 4 C -0.573 4.573 5 H 0.080 0.920 6 C -0.137 4.137 7 N -0.520 5.520 8 Si 0.730 3.270 9 H -0.205 1.205 10 H -0.211 1.211 11 H -0.198 1.198 12 N -0.356 5.356 13 C 0.289 3.711 14 O -0.405 6.405 15 C -0.030 4.030 16 O -0.206 6.206 17 C 0.071 3.929 18 C -0.075 4.075 19 Cl -0.009 7.009 20 C -0.115 4.115 21 C -0.122 4.122 22 C -0.116 4.116 23 C -0.075 4.075 24 Cl -0.010 7.010 25 H 0.046 0.954 26 H 0.109 0.891 27 H 0.034 0.966 28 H 0.075 0.925 29 H 0.221 0.779 30 H 0.099 0.901 31 H 0.098 0.902 32 H 0.161 0.839 33 H 0.162 0.838 34 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 6.005 -6.537 -21.983 23.707 hybrid contribution 0.421 -1.072 0.947 1.491 sum 6.425 -7.609 -21.036 23.274 Atomic orbital electron populations 1.22088 0.98356 0.99169 1.01024 1.18778 0.91082 0.94031 0.79537 0.93216 1.21202 1.32545 1.13294 0.90247 0.92008 1.24887 0.94782 0.94971 0.99060 1.69903 1.35759 1.22419 1.23927 0.86435 0.78610 0.79817 0.82156 1.20543 1.21062 1.19833 1.46423 1.65607 1.13594 1.09999 1.19774 0.79606 0.87731 0.83996 1.90705 1.49661 1.15546 1.84575 1.22654 1.02078 0.92182 0.86134 1.86215 1.85101 1.34589 1.14667 1.18237 0.89226 0.97082 0.88401 1.21358 0.89835 1.02178 0.94115 1.98423 1.58835 1.83087 1.60539 1.21133 1.01273 0.97594 0.91542 1.21105 0.91979 0.99307 0.99822 1.21129 0.96641 0.99001 0.94788 1.21352 0.86882 1.02702 0.96563 1.98418 1.11618 1.96902 1.94054 0.95418 0.89055 0.96552 0.92528 0.77883 0.90131 0.90191 0.83852 0.83828 0.83863 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 -3.72 9.26 37.16 0.34 -3.38 16 2 C 0.27 6.86 2.56 -69.08 -0.18 6.68 16 3 H 0.05 1.48 7.58 -51.93 -0.39 1.08 16 4 C -0.53 -14.16 8.73 -34.45 -0.30 -14.46 16 5 H 0.06 1.55 7.74 -52.49 -0.41 1.15 16 6 C 0.07 1.79 5.30 -17.82 -0.09 1.69 16 7 N -0.88 -24.99 11.32 55.43 0.63 -24.36 16 8 Si 0.90 20.62 29.54 -169.99 -5.02 15.60 16 9 H -0.28 -6.38 7.11 56.52 0.40 -5.98 16 10 H -0.28 -6.49 7.11 56.52 0.40 -6.09 16 11 H -0.27 -6.08 7.11 56.52 0.40 -5.68 16 12 N -0.71 -14.81 5.07 -54.93 -0.28 -15.09 16 13 C 0.51 10.49 7.87 -10.99 -0.09 10.40 16 14 O -0.53 -13.40 16.16 -14.35 -0.23 -13.63 16 15 C 0.05 0.74 6.54 36.01 0.24 0.97 16 16 O -0.29 -4.83 8.51 -39.48 -0.34 -5.17 16 17 C 0.12 1.55 5.71 -39.17 -0.22 1.33 16 18 C -0.05 -0.54 6.33 -39.37 -0.25 -0.79 16 19 Cl -0.04 -0.48 28.50 -51.86 -1.48 -1.95 16 20 C -0.10 -0.78 9.83 -39.56 -0.39 -1.17 16 21 C -0.10 -0.68 10.04 -39.57 -0.40 -1.08 16 22 C -0.10 -0.78 9.83 -39.56 -0.39 -1.16 16 23 C -0.05 -0.54 6.33 -39.37 -0.25 -0.79 16 24 Cl -0.04 -0.48 28.50 -51.86 -1.48 -1.96 16 25 H 0.03 0.64 8.14 -51.93 -0.42 0.22 16 26 H 0.09 2.49 6.07 -51.93 -0.32 2.17 16 27 H 0.02 0.39 8.14 -51.93 -0.42 -0.03 16 28 H 0.26 7.10 8.31 -40.82 -0.34 6.76 16 29 H 0.39 6.86 8.54 -40.82 -0.35 6.52 16 30 H 0.08 1.09 8.14 -51.93 -0.42 0.67 16 31 H 0.08 1.07 8.14 -51.94 -0.42 0.64 16 32 H 0.14 0.82 8.06 -52.49 -0.42 0.40 16 33 H 0.14 0.48 8.06 -52.48 -0.42 0.05 16 34 H 0.14 0.81 8.06 -52.49 -0.42 0.39 16 LS Contribution 332.23 15.07 5.01 5.01 Total: -1.00 -32.32 332.23 -8.72 -41.04 By element: Atomic # 1 Polarization: 5.82 SS G_CDS: -3.56 Total: 2.26 kcal Atomic # 6 Polarization: 0.23 SS G_CDS: -1.98 Total: -1.75 kcal Atomic # 7 Polarization: -39.80 SS G_CDS: 0.35 Total: -39.45 kcal Atomic # 8 Polarization: -18.23 SS G_CDS: -0.57 Total: -18.80 kcal Atomic # 14 Polarization: 20.62 SS G_CDS: -5.02 Total: 15.60 kcal Atomic # 17 Polarization: -0.96 SS G_CDS: -2.96 Total: -3.91 kcal Total LS contribution 5.01 Total: 5.01 kcal Total: -32.32 -8.72 -41.04 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000299640243.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -19.542 kcal (2) G-P(sol) polarization free energy of solvation -32.315 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -51.857 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.723 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.038 kcal (6) G-S(sol) free energy of system = (1) + (5) -60.580 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.49 seconds