Wall clock time and date at job start Tue Mar 31 2020 11:57:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42906 * 113.99558 * 2 1 4 4 C 1.53010 * 109.46834 * 179.97438 * 3 2 1 5 5 N 1.46490 * 109.47087 * 64.99933 * 4 3 2 6 6 C 1.36885 * 120.00099 * 285.29401 * 5 4 3 7 7 H 1.08001 * 120.00090 * 315.89636 * 6 5 4 8 8 C 1.39040 * 120.00228 * 135.90401 * 6 5 4 9 9 N 1.31371 * 120.00015 * 338.97711 * 8 6 5 10 10 Si 1.86795 * 120.00209 * 158.98497 * 8 6 5 11 11 H 1.48492 * 109.47293 * 359.97438 * 10 8 6 12 12 H 1.48505 * 109.47428 * 119.99688 * 10 8 6 13 13 H 1.48507 * 109.47170 * 239.99478 * 10 8 6 14 14 C 1.34774 * 120.00027 * 105.28893 * 5 4 3 15 15 O 1.21599 * 120.00127 * 186.47285 * 14 5 4 16 16 C 1.47657 * 119.99997 * 6.20094 * 14 5 4 17 17 C 1.39696 * 120.15622 * 322.06580 * 16 14 5 18 18 C 1.37878 * 119.88713 * 179.76540 * 17 16 14 19 19 C 1.38428 * 120.19768 * 0.51159 * 18 17 16 20 20 C 1.38390 * 120.31679 * 359.74494 * 19 18 17 21 21 Cl 1.73594 * 119.94103 * 179.97438 * 20 19 18 22 22 C 1.38245 * 120.11043 * 359.97438 * 20 19 18 23 23 Cl 1.73602 * 120.10012 * 180.02562 * 22 20 19 24 24 H 1.09006 * 109.46926 * 179.97438 * 1 2 3 25 25 H 1.09003 * 109.47625 * 300.00330 * 1 2 3 26 26 H 1.09004 * 109.47067 * 60.00396 * 1 2 3 27 27 H 1.09003 * 109.47207 * 60.00009 * 3 2 1 28 28 H 1.08995 * 109.47103 * 299.99388 * 3 2 1 29 29 H 1.09006 * 109.46959 * 304.99706 * 4 3 2 30 30 H 1.09000 * 109.47011 * 185.00231 * 4 3 2 31 31 H 0.97001 * 120.00171 * 185.04050 * 9 8 6 32 32 H 1.08004 * 120.05375 * 0.02562 * 17 16 14 33 33 H 1.07998 * 119.90082 * 180.23828 * 18 17 16 34 34 H 1.08000 * 119.83813 * 179.75974 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3056 0.0000 4 6 3.5354 1.1848 0.0006 5 7 3.9767 0.5641 -1.2508 6 6 3.8035 -0.7795 -1.4466 7 1 4.0372 -1.4753 -0.6544 8 6 3.3268 -1.2487 -2.6656 9 7 2.6637 -0.4444 -3.4651 10 14 3.6290 -3.0227 -3.1664 11 1 4.3947 -3.7148 -2.0989 12 1 2.3275 -3.7091 -3.3671 13 1 4.4055 -3.0544 -4.4319 14 6 4.5530 1.3161 -2.2093 15 8 4.8119 0.8270 -3.2921 16 6 4.8645 2.7353 -1.9467 17 6 3.9870 3.5186 -1.1932 18 6 4.2858 4.8420 -0.9473 19 6 5.4473 5.3993 -1.4537 20 6 6.3199 4.6324 -2.2057 21 17 7.7735 5.3414 -2.8366 22 6 6.0360 3.3026 -2.4553 23 17 7.1312 2.3406 -3.3982 24 1 -0.3633 -1.0277 -0.0005 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8901 27 1 1.6885 1.8465 0.8900 28 1 1.6885 1.8464 -0.8900 29 1 3.8508 0.5687 0.8428 30 1 3.9784 2.1767 0.0903 31 1 2.2682 -0.7892 -4.2810 32 1 3.0781 3.0872 -0.8004 33 1 3.6094 5.4468 -0.3615 34 1 5.6737 6.4375 -1.2608 RHF calculation, no. of doubly occupied orbitals= 52 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV ZINC000318939364.mol2 34 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 31 2020 11:57:31 Heat of formation + Delta-G solvation = -23.197690 kcal Electronic energy + Delta-G solvation = -22733.029147 eV Core-core repulsion = 19105.880531 eV Total energy + Delta-G solvation = -3627.148616 eV No. of doubly occupied orbitals = 52 Molecular weight (most abundant/longest-lived isotopes) = 317.037 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -39.76572 -37.85881 -36.87985 -36.26627 -35.95099 -34.19544 -32.28020 -30.50553 -30.40324 -28.85284 -25.80959 -25.06098 -23.12360 -22.46739 -21.92034 -19.70991 -17.42150 -16.67521 -16.34245 -15.54000 -15.48943 -15.18903 -14.95245 -14.39564 -14.22480 -14.02134 -13.86169 -13.52854 -12.91501 -12.64712 -12.40966 -11.73089 -11.59554 -11.45157 -11.42698 -11.22774 -11.09544 -10.89241 -10.82789 -10.79526 -10.54957 -10.36158 -10.25708 -10.06013 -8.97561 -8.70602 -8.60417 -8.43681 -8.05299 -7.09901 -6.06909 -3.72307 1.11507 1.19110 2.08403 2.62523 3.34601 3.45367 3.46551 3.49187 4.27499 4.40228 4.53560 4.70993 4.99342 5.06326 5.27338 5.28203 5.47428 5.54978 5.64029 5.79289 5.81120 5.84965 5.95799 5.98106 6.04491 6.16931 6.19169 6.30017 6.44779 6.58686 6.75610 7.69578 7.88869 8.29245 9.03898 9.15447 9.64575 10.24233 11.01458 Molecular weight = 317.04amu Principal moments of inertia in cm(-1) A = 0.015775 B = 0.005654 C = 0.004368 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1774.517181 B = 4951.213051 C = 6408.163629 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.347 6.347 3 C 0.055 3.945 4 C 0.079 3.921 5 N -0.429 5.429 6 C -0.318 4.318 7 H 0.082 0.918 8 C 0.078 3.922 9 N -0.816 5.816 10 Si 0.908 3.092 11 H -0.271 1.271 12 H -0.287 1.287 13 H -0.282 1.282 14 C 0.490 3.510 15 O -0.504 6.504 16 C -0.072 4.072 17 C -0.107 4.107 18 C -0.113 4.113 19 C -0.109 4.109 20 C -0.036 4.036 21 Cl -0.062 7.062 22 C -0.003 4.003 23 Cl -0.028 7.028 24 H 0.077 0.923 25 H 0.025 0.975 26 H 0.035 0.965 27 H 0.036 0.964 28 H 0.047 0.953 29 H 0.066 0.934 30 H 0.090 0.910 31 H 0.262 0.738 32 H 0.149 0.851 33 H 0.136 0.864 34 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.727 11.085 7.255 13.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 O -0.265 6.265 3 C -0.023 4.023 4 C -0.045 4.045 5 N -0.150 5.150 6 C -0.444 4.444 7 H 0.099 0.901 8 C -0.133 4.133 9 N -0.450 5.450 10 Si 0.735 3.265 11 H -0.196 1.196 12 H -0.214 1.214 13 H -0.208 1.208 14 C 0.277 3.723 15 O -0.381 6.381 16 C -0.077 4.077 17 C -0.126 4.126 18 C -0.131 4.131 19 C -0.128 4.128 20 C -0.064 4.064 21 Cl -0.033 7.033 22 C -0.032 4.032 23 Cl 0.001 6.999 24 H 0.095 0.905 25 H 0.044 0.956 26 H 0.053 0.947 27 H 0.054 0.946 28 H 0.065 0.935 29 H 0.084 0.916 30 H 0.108 0.892 31 H 0.072 0.928 32 H 0.166 0.834 33 H 0.153 0.847 34 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 1.165 10.614 6.329 12.412 hybrid contribution -0.178 -0.434 -0.390 0.610 sum 0.987 10.180 5.939 11.827 Atomic orbital electron populations 1.22610 0.83277 1.01859 0.98518 1.88189 1.17402 1.26037 1.94842 1.22870 0.95190 0.85906 0.98315 1.22219 0.92108 0.99167 0.91019 1.43096 1.50598 1.08037 1.13238 1.18910 1.45267 0.80001 1.00265 0.90054 1.25148 0.93649 0.97968 0.96570 1.69836 1.27758 1.35601 1.11761 0.86224 0.77752 0.83579 0.78928 1.19564 1.21372 1.20812 1.17583 0.83711 0.83846 0.87177 1.90701 1.53600 1.71517 1.22268 1.20595 0.92794 0.97819 0.96499 1.21927 1.00082 0.93553 0.97073 1.21086 0.96683 0.95015 1.00361 1.20957 0.94016 0.99849 0.98014 1.20641 0.91379 0.92043 1.02316 1.98356 1.35646 1.83430 1.85877 1.20740 0.93732 0.90421 0.98274 1.98399 1.60793 1.70770 1.69903 0.90455 0.95647 0.94684 0.94595 0.93498 0.91560 0.89204 0.92815 0.83360 0.84657 0.84565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.55 11.01 101.05 1.11 1.67 16 2 O -0.35 -7.03 9.47 -35.23 -0.33 -7.37 16 3 C 0.06 0.98 5.31 37.16 0.20 1.17 16 4 C 0.08 1.49 5.36 -4.04 -0.02 1.47 16 5 N -0.43 -10.41 2.55 -115.95 -0.30 -10.70 16 6 C -0.32 -8.54 8.00 -15.00 -0.12 -8.66 16 7 H 0.08 2.17 7.92 -52.49 -0.42 1.75 16 8 C 0.08 2.17 4.30 -17.45 -0.07 2.09 16 9 N -0.82 -23.65 11.72 55.50 0.65 -23.00 16 10 Si 0.91 22.06 29.61 -169.99 -5.03 17.03 16 11 H -0.27 -6.40 7.11 56.52 0.40 -6.00 16 12 H -0.29 -6.78 7.11 56.52 0.40 -6.38 16 13 H -0.28 -7.10 7.11 56.52 0.40 -6.70 16 14 C 0.49 12.24 6.51 -12.42 -0.08 12.16 16 15 O -0.50 -14.59 12.70 5.28 0.07 -14.52 16 16 C -0.07 -1.45 5.40 -104.94 -0.57 -2.02 16 17 C -0.11 -1.72 7.35 -39.17 -0.29 -2.01 16 18 C -0.11 -1.41 10.03 -39.64 -0.40 -1.81 16 19 C -0.11 -1.40 9.82 -39.46 -0.39 -1.78 16 20 C -0.04 -0.57 6.32 -39.52 -0.25 -0.82 16 21 Cl -0.06 -0.87 27.95 -51.86 -1.45 -2.32 16 22 C 0.00 -0.05 6.34 -39.02 -0.25 -0.30 16 23 Cl -0.03 -0.57 25.76 -51.86 -1.34 -1.91 16 24 H 0.08 1.16 8.14 -51.93 -0.42 0.74 16 25 H 0.03 0.33 8.14 -51.93 -0.42 -0.09 16 26 H 0.03 0.57 8.14 -51.93 -0.42 0.14 16 27 H 0.04 0.50 8.14 -51.93 -0.42 0.07 16 28 H 0.05 0.89 7.20 -51.93 -0.37 0.51 16 29 H 0.07 1.21 8.14 -51.93 -0.42 0.79 16 30 H 0.09 1.46 4.00 -51.93 -0.21 1.25 16 31 H 0.26 7.34 8.31 -40.82 -0.34 7.00 16 32 H 0.15 2.27 3.83 -52.48 -0.20 2.07 16 33 H 0.14 1.19 8.06 -52.49 -0.42 0.76 16 34 H 0.14 1.33 8.06 -52.49 -0.42 0.90 16 LS Contribution 314.91 15.07 4.75 4.75 Total: -1.00 -32.66 314.91 -7.40 -40.06 By element: Atomic # 1 Polarization: 0.12 SS G_CDS: -3.29 Total: -3.18 kcal Atomic # 6 Polarization: 2.28 SS G_CDS: -1.12 Total: 1.16 kcal Atomic # 7 Polarization: -34.06 SS G_CDS: 0.35 Total: -33.70 kcal Atomic # 8 Polarization: -21.62 SS G_CDS: -0.27 Total: -21.89 kcal Atomic # 14 Polarization: 22.06 SS G_CDS: -5.03 Total: 17.03 kcal Atomic # 17 Polarization: -1.44 SS G_CDS: -2.79 Total: -4.23 kcal Total LS contribution 4.75 Total: 4.75 kcal Total: -32.66 -7.40 -40.06 kcal The number of atoms in the molecule is 34 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. ZINC000318939364.mol2 34 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 16.864 kcal (2) G-P(sol) polarization free energy of solvation -32.660 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.796 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.402 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -40.062 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.198 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds